RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 CTCFP49711 727 aaPredicted RBP22.86■■□□□ 1.25
HMGN1P19-201ENST00000436976 CHADLQ6NUI6 762 aa22.86■■□□□ 1.25
HMGN1P19-201ENST00000436976 PCDH10Q9P2E7 1040 aa22.86■■□□□ 1.25
HMGN1P19-201ENST00000436976 PTCD1O75127 700 aaKnown RBP22.85■■□□□ 1.25
HMGN1P19-201ENST00000436976 COL11A2P13942 1736 aaPredicted RBP22.84■■□□□ 1.25
HMGN1P19-201ENST00000436976 SCN11AQ9UI33 1791 aa22.84■■□□□ 1.25
HMGN1P19-201ENST00000436976 USPL1Q5W0Q7 1092 aa22.83■■□□□ 1.25
HMGN1P19-201ENST00000436976 INTS5Q6P9B9 1019 aaKnown RBP22.83■■□□□ 1.25
HMGN1P19-201ENST00000436976 TTLL6Q8N841 843 aa22.83■■□□□ 1.25
HMGN1P19-201ENST00000436976 ABHD8Q96I13 439 aa22.83■■□□□ 1.25
HMGN1P19-201ENST00000436976 CARD14Q9BXL6 1004 aa22.83■■□□□ 1.25
HMGN1P19-201ENST00000436976 SCN4AP35499 1836 aa22.82■■□□□ 1.24
HMGN1P19-201ENST00000436976 LBX1P52954 281 aa22.82■■□□□ 1.24
HMGN1P19-201ENST00000436976 DPY19L2Q6NUT2 758 aa22.82■■□□□ 1.24
HMGN1P19-201ENST00000436976 PASKQ96RG2 1323 aa22.82■■□□□ 1.24
HMGN1P19-201ENST00000436976 CARMIL3Q8ND23 1372 aa22.81■■□□□ 1.24
HMGN1P19-201ENST00000436976 VEGFBP49765 207 aa22.81■■□□□ 1.24
HMGN1P19-201ENST00000436976 NFIXQ14938 502 aa22.81■■□□□ 1.24
HMGN1P19-201ENST00000436976 CABP4P57796 275 aa22.8■■□□□ 1.24
HMGN1P19-201ENST00000436976 AIDAQ96BJ3 306 aa22.8■■□□□ 1.24
HMGN1P19-201ENST00000436976 WBP1LQ9NX94 342 aa22.8■■□□□ 1.24
HMGN1P19-201ENST00000436976 SLC24A1O60721 1099 aa22.79■■□□□ 1.24
HMGN1P19-201ENST00000436976 HSP90AB1P08238 724 aaKnown RBP22.79■■□□□ 1.24
HMGN1P19-201ENST00000436976 EIF4A2Q14240 407 aaKnown RBP22.79■■□□□ 1.24
HMGN1P19-201ENST00000436976 POLKQ9UBT6 870 aa22.78■■□□□ 1.24
HMGN1P19-201ENST00000436976 TNRC18O15417 2968 aaPredicted RBP22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 ZPR1O75312 459 aa22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 ERFEQ4G0M1 354 aa22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 C2CD5Q86YS7 1000 aa22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 SLX4Q8IY92 1834 aa22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 SOS1Q07889 1333 aaPredicted RBP22.77■■□□□ 1.24
HMGN1P19-201ENST00000436976 DDNO94850 711 aaPredicted RBP22.76■■□□□ 1.23
HMGN1P19-201ENST00000436976 HSPA8P11142 646 aaKnown RBP22.76■■□□□ 1.23
HMGN1P19-201ENST00000436976 BCL2L12Q9HB09 334 aa22.76■■□□□ 1.23
HMGN1P19-201ENST00000436976 ADAMTSL1Q8N6G6 1762 aa22.76■■□□□ 1.23
HMGN1P19-201ENST00000436976 SERPINB2P05120 415 aa22.75■■□□□ 1.23
HMGN1P19-201ENST00000436976 NFATC2IPQ8NCF5 419 aa22.75■■□□□ 1.23
HMGN1P19-201ENST00000436976 ARFGEF2Q9Y6D5 1785 aa22.75■■□□□ 1.23
HMGN1P19-201ENST00000436976 ZNF530Q6P9A1 599 aaPredicted RBP22.74■■□□□ 1.23
HMGN1P19-201ENST00000436976 DNAJC10Q8IXB1 793 aa22.73■■□□□ 1.23
HMGN1P19-201ENST00000436976 NARFQ9UHQ1 456 aa22.73■■□□□ 1.23
HMGN1P19-201ENST00000436976 PDE4DIPQ5VU43 2346 aa22.73■■□□□ 1.23
HMGN1P19-201ENST00000436976 H0YIN7 160 aa22.72■■□□□ 1.23
HMGN1P19-201ENST00000436976 MLLT1Q03111 559 aaPredicted RBP22.72■■□□□ 1.23
HMGN1P19-201ENST00000436976 COL15A1P39059 1388 aa22.72■■□□□ 1.23
HMGN1P19-201ENST00000436976 TMEM88BA6NKF7 163 aa22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 C21orf2O43822 256 aa22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 ITGBL1O95965 494 aaPredicted RBP22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 RGS19P49795 217 aa22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 MTHFSP49914 203 aa22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 PLEKHO1Q53GL0 409 aaPredicted RBP22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 ZNF219Q9P2Y4 722 aaPredicted RBP22.71■■□□□ 1.23
HMGN1P19-201ENST00000436976 LDHDQ86WU2 507 aa22.7■■□□□ 1.22
HMGN1P19-201ENST00000436976 THSD7BQ9C0I4 1608 aa22.7■■□□□ 1.22
HMGN1P19-201ENST00000436976 LTBP3Q9NS15 1303 aa22.68■■□□□ 1.22
HMGN1P19-201ENST00000436976 TAF1DQ9H5J8 278 aaPredicted RBP22.68■■□□□ 1.22
HMGN1P19-201ENST00000436976 CYP19A1P11511 503 aaPredicted RBP22.67■■□□□ 1.22
HMGN1P19-201ENST00000436976 ZNF622Q969S3 477 aaKnown RBP eCLIP22.67■■□□□ 1.22
HMGN1P19-201ENST00000436976 ZBTB1Q9Y2K1 713 aa22.67■■□□□ 1.22
HMGN1P19-201ENST00000436976 SCN7AQ01118 1682 aa22.66■■□□□ 1.22
HMGN1P19-201ENST00000436976 RASSF10A6NK89 507 aa22.66■■□□□ 1.22
HMGN1P19-201ENST00000436976 CCDC85CA6NKD9 419 aa22.66■■□□□ 1.22
HMGN1P19-201ENST00000436976 AMOTQ4VCS5 1084 aa22.66■■□□□ 1.22
HMGN1P19-201ENST00000436976 TAOK3Q9H2K8 898 aa22.66■■□□□ 1.22
HMGN1P19-201ENST00000436976 L3MBTL3Q96JM7 780 aaPredicted RBP22.65■■□□□ 1.22
HMGN1P19-201ENST00000436976 UBR2Q8IWV8 1755 aa22.65■■□□□ 1.22
HMGN1P19-201ENST00000436976 CASP8AP2Q9UKL3 1982 aa22.65■■□□□ 1.22
HMGN1P19-201ENST00000436976 IQCA1LA6NCM1 817 aa22.64■■□□□ 1.21
HMGN1P19-201ENST00000436976 AEBP1Q8IUX7 1158 aa22.64■■□□□ 1.21
HMGN1P19-201ENST00000436976 TNNT2P45379 298 aaPredicted RBP22.63■■□□□ 1.21
HMGN1P19-201ENST00000436976 DEFB115Q30KQ5 88 aa22.63■■□□□ 1.21
HMGN1P19-201ENST00000436976 C1orf141Q5JVX7 400 aa22.63■■□□□ 1.21
HMGN1P19-201ENST00000436976 BICDL1Q6ZP65 573 aa22.63■■□□□ 1.21
HMGN1P19-201ENST00000436976 CCDC24Q8N4L8 307 aa22.63■■□□□ 1.21
HMGN1P19-201ENST00000436976 TRPM7Q96QT4 1865 aa22.62■■□□□ 1.21
HMGN1P19-201ENST00000436976 WDR33Q9C0J8 1336 aaKnown RBP22.62■■□□□ 1.21
HMGN1P19-201ENST00000436976 MAP2K1Q02750 393 aaPredicted RBP22.61■■□□□ 1.21
HMGN1P19-201ENST00000436976 MRC1P22897 1456 aa22.6■■□□□ 1.21
HMGN1P19-201ENST00000436976 CDCA8Q53HL2 280 aa22.6■■□□□ 1.21
HMGN1P19-201ENST00000436976 EAPPQ56P03 285 aaPredicted RBP22.6■■□□□ 1.21
HMGN1P19-201ENST00000436976 BRIP1Q9BX63 1249 aa22.6■■□□□ 1.21
HMGN1P19-201ENST00000436976 SLC39A6Q13433 755 aa22.59■■□□□ 1.21
HMGN1P19-201ENST00000436976 TBC1D9BQ66K14 1250 aa22.59■■□□□ 1.21
HMGN1P19-201ENST00000436976 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
HMGN1P19-201ENST00000436976 LTBP1Q14766 1721 aa22.59■■□□□ 1.21
HMGN1P19-201ENST00000436976 PDE6BP35913 854 aa22.58■■□□□ 1.21
HMGN1P19-201ENST00000436976 SLC52A2Q9HAB3 445 aa22.58■■□□□ 1.21
HMGN1P19-201ENST00000436976 PDZRN3Q9UPQ7 1066 aa22.58■■□□□ 1.21
HMGN1P19-201ENST00000436976 ZNF541Q9H0D2 1346 aa22.57■■□□□ 1.2
HMGN1P19-201ENST00000436976 MAP1SQ66K74 1059 aaPredicted RBP22.56■■□□□ 1.2
HMGN1P19-201ENST00000436976 PRPF40BQ6NWY9 871 aaKnown RBP22.56■■□□□ 1.2
HMGN1P19-201ENST00000436976 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
HMGN1P19-201ENST00000436976 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
HMGN1P19-201ENST00000436976 CNTROBQ8N137 903 aa22.55■■□□□ 1.2
HMGN1P19-201ENST00000436976 CLEC11AQ9Y240 323 aa22.55■■□□□ 1.2
HMGN1P19-201ENST00000436976 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
HMGN1P19-201ENST00000436976 EPHX2P34913 555 aa22.54■■□□□ 1.2
HMGN1P19-201ENST00000436976 EIF5P55010 431 aaKnown RBP22.54■■□□□ 1.2
HMGN1P19-201ENST00000436976 HACL1Q9UJ83 578 aa22.54■■□□□ 1.2
HMGN1P19-201ENST00000436976 CNKSR1Q969H4 720 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms