RNA–Protein interactions for RNA: ENST00000436883.5

PTPA-220, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4 BASIC

Gene PTPA, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-220ENST00000436883 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
PTPA-220ENST00000436883 NMRK2Q9NPI5 230 aa20.99■□□□□ 0.95
PTPA-220ENST00000436883 COL15A1P39059 1388 aa20.98■□□□□ 0.95
PTPA-220ENST00000436883 TOMM70O94826 608 aa20.98■□□□□ 0.95
PTPA-220ENST00000436883 STARD3NLO95772 234 aa20.98■□□□□ 0.95
PTPA-220ENST00000436883 BRCA1P38398 1863 aaKnown RBP20.98■□□□□ 0.95
PTPA-220ENST00000436883 VIRMAQ69YN4 1812 aaKnown RBP20.97■□□□□ 0.95
PTPA-220ENST00000436883 MRC1P22897 1456 aa20.97■□□□□ 0.95
PTPA-220ENST00000436883 TEFQ10587 303 aa20.97■□□□□ 0.95
PTPA-220ENST00000436883 RNF181Q9P0P0 153 aa20.97■□□□□ 0.95
PTPA-220ENST00000436883 KCPQ6ZWJ8 1503 aa20.96■□□□□ 0.95
PTPA-220ENST00000436883 GNAT3A8MTJ3 354 aa20.96■□□□□ 0.95
PTPA-220ENST00000436883 SERPINB2P05120 415 aa20.96■□□□□ 0.95
PTPA-220ENST00000436883 BICDL1Q6ZP65 573 aa20.96■□□□□ 0.95
PTPA-220ENST00000436883 C16orf71Q8IYS4 520 aaPredicted RBP20.96■□□□□ 0.95
PTPA-220ENST00000436883 GAS2L2Q8NHY3 880 aa20.96■□□□□ 0.95
PTPA-220ENST00000436883 ARFGEF1Q9Y6D6 1849 aa20.95■□□□□ 0.94
PTPA-220ENST00000436883 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
PTPA-220ENST00000436883 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
PTPA-220ENST00000436883 APLP1P51693 650 aa20.94■□□□□ 0.94
PTPA-220ENST00000436883 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
PTPA-220ENST00000436883 ZNF330Q9Y3S2 320 aaPredicted RBP20.94■□□□□ 0.94
PTPA-220ENST00000436883 ZNF496Q96IT1 587 aaPredicted RBP20.93■□□□□ 0.94
PTPA-220ENST00000436883 KDM2BQ8NHM5 1336 aa20.93■□□□□ 0.94
PTPA-220ENST00000436883 A0A087WZG4 1122 aa20.92■□□□□ 0.94
PTPA-220ENST00000436883 ZNF790Q6PG37 636 aa20.92■□□□□ 0.94
PTPA-220ENST00000436883 TEX13AQ9BXU3 409 aaPredicted RBP20.92■□□□□ 0.94
PTPA-220ENST00000436883 NPC1L1Q9UHC9 1359 aa20.92■□□□□ 0.94
PTPA-220ENST00000436883 EIF5P55010 431 aaKnown RBP20.91■□□□□ 0.94
PTPA-220ENST00000436883 NPM2Q86SE8 214 aaKnown RBP20.91■□□□□ 0.94
PTPA-220ENST00000436883 C2CD5Q86YS7 1000 aa20.91■□□□□ 0.94
PTPA-220ENST00000436883 CFAP53Q96M91 514 aa20.91■□□□□ 0.94
PTPA-220ENST00000436883 H0YIN7 160 aa20.9■□□□□ 0.94
PTPA-220ENST00000436883 TTLL6Q8N841 843 aa20.9■□□□□ 0.94
PTPA-220ENST00000436883 RRAGCQ9HB90 399 aa20.9■□□□□ 0.94
PTPA-220ENST00000436883 AFDNP55196 1824 aaKnown RBP20.9■□□□□ 0.94
PTPA-220ENST00000436883 COL3A1P02461 1466 aaPredicted RBP20.89■□□□□ 0.94
PTPA-220ENST00000436883 HEG1Q9ULI3 1381 aa20.89■□□□□ 0.93
PTPA-220ENST00000436883 RASSF7Q02833 373 aa20.89■□□□□ 0.93
PTPA-220ENST00000436883 IFFO2Q5TF58 517 aa20.89■□□□□ 0.93
PTPA-220ENST00000436883 RBM46Q8TBY0 533 aaKnown RBP20.89■□□□□ 0.93
PTPA-220ENST00000436883 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
PTPA-220ENST00000436883 TBC1D2BQ9UPU7 963 aa20.89■□□□□ 0.93
PTPA-220ENST00000436883 PRKAR2BP31323 418 aa20.88■□□□□ 0.93
PTPA-220ENST00000436883 TBC1D9BQ66K14 1250 aa20.88■□□□□ 0.93
PTPA-220ENST00000436883 PHACTR3Q96KR7 559 aa20.88■□□□□ 0.93
PTPA-220ENST00000436883 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
PTPA-220ENST00000436883 A1BGP04217 495 aa20.87■□□□□ 0.93
PTPA-220ENST00000436883 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
PTPA-220ENST00000436883 NPHP1O15259 732 aa20.86■□□□□ 0.93
PTPA-220ENST00000436883 ZNF622Q969S3 477 aaKnown RBP eCLIP20.86■□□□□ 0.93
PTPA-220ENST00000436883 UBR2Q8IWV8 1755 aa20.86■□□□□ 0.93
PTPA-220ENST00000436883 KCNQ3O43525 872 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 LMNB1P20700 586 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 IL6STP40189 918 aaPredicted RBP20.85■□□□□ 0.93
PTPA-220ENST00000436883 CCDC24Q8N4L8 307 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 RSPH6AQ9H0K4 717 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 SBF1O95248 1867 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 CARMIL3Q8ND23 1372 aa20.85■□□□□ 0.93
PTPA-220ENST00000436883 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
PTPA-220ENST00000436883 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
PTPA-220ENST00000436883 ZNF219Q9P2Y4 722 aaPredicted RBP20.84■□□□□ 0.93
PTPA-220ENST00000436883 PDE6BP35913 854 aa20.83■□□□□ 0.93
PTPA-220ENST00000436883 FSTL1Q12841 308 aa20.83■□□□□ 0.93
PTPA-220ENST00000436883 DNAJC5GQ8N7S2 189 aa20.83■□□□□ 0.93
PTPA-220ENST00000436883 RTF1Q92541 710 aaKnown RBP20.83■□□□□ 0.93
PTPA-220ENST00000436883 SETDB2Q96T68 719 aa20.83■□□□□ 0.93
PTPA-220ENST00000436883 NRXN2Q9P2S2 1712 aa20.83■□□□□ 0.92
PTPA-220ENST00000436883 BRIP1Q9BX63 1249 aa20.82■□□□□ 0.92
PTPA-220ENST00000436883 PRELPP51888 382 aa20.81■□□□□ 0.92
PTPA-220ENST00000436883 HTRA3P83110 453 aa20.81■□□□□ 0.92
PTPA-220ENST00000436883 PRR5LQ6MZQ0 368 aa20.81■□□□□ 0.92
PTPA-220ENST00000436883 PDZRN3Q9UPQ7 1066 aa20.81■□□□□ 0.92
PTPA-220ENST00000436883 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
PTPA-220ENST00000436883 ZC3H4Q9UPT8 1303 aaKnown RBP20.8■□□□□ 0.92
PTPA-220ENST00000436883 PPP2R1AP30153 589 aa20.8■□□□□ 0.92
PTPA-220ENST00000436883 PIP4K2AP48426 406 aaPredicted RBP20.8■□□□□ 0.92
PTPA-220ENST00000436883 MCM10Q7L590 875 aa20.8■□□□□ 0.92
PTPA-220ENST00000436883 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
PTPA-220ENST00000436883 USP16Q9Y5T5 823 aa20.8■□□□□ 0.92
PTPA-220ENST00000436883 GLTPD2A6NH11 291 aa20.79■□□□□ 0.92
PTPA-220ENST00000436883 C21orf2O43822 256 aa20.79■□□□□ 0.92
PTPA-220ENST00000436883 CAMTA2O94983 1202 aa20.79■□□□□ 0.92
PTPA-220ENST00000436883 CNBD1Q8NA66 436 aa20.79■□□□□ 0.92
PTPA-220ENST00000436883 SIPA1L3O60292 1781 aaPredicted RBP20.79■□□□□ 0.92
PTPA-220ENST00000436883 NFKBIEO00221 500 aa20.78■□□□□ 0.92
PTPA-220ENST00000436883 VEGFAP15692 232 aaPredicted RBP20.78■□□□□ 0.92
PTPA-220ENST00000436883 SMC1BQ8NDV3 1235 aa20.78■□□□□ 0.92
PTPA-220ENST00000436883 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.92
PTPA-220ENST00000436883 PRAMEF22A3QJZ6 481 aa20.77■□□□□ 0.92
PTPA-220ENST00000436883 ST5P78524 1137 aa20.77■□□□□ 0.92
PTPA-220ENST00000436883 CCDC88AQ3V6T2 1871 aa20.76■□□□□ 0.91
PTPA-220ENST00000436883 SNRPA1P09661 255 aaKnown RBP20.76■□□□□ 0.91
PTPA-220ENST00000436883 DCTN1Q14203 1278 aa20.76■□□□□ 0.91
PTPA-220ENST00000436883 DPY19L2Q6NUT2 758 aa20.76■□□□□ 0.91
PTPA-220ENST00000436883 TNRC6CQ9HCJ0 1690 aaKnown RBP20.75■□□□□ 0.91
PTPA-220ENST00000436883 ERFEQ4G0M1 354 aa20.74■□□□□ 0.91
PTPA-220ENST00000436883 NBPF5PQ86XG9 351 aaPredicted RBP20.74■□□□□ 0.91
PTPA-220ENST00000436883 ANKRD31Q8N7Z5 1873 aa20.74■□□□□ 0.91
PTPA-220ENST00000436883 CNKSR1Q969H4 720 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms