RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 AMOTQ4VCS5 1084 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 PLEKHO1Q53GL0 409 aaPredicted RBP9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 UNC5CLQ8IV45 518 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 PARP9Q8IXQ6 854 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 TRMT2AQ8IZ69 625 aaKnown RBP9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 DDX12PQ92771 950 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 THUMPD2Q9BTF0 503 aaKnown RBP9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 USP35Q9P2H5 1018 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 MEGF6O75095 1541 aa9.2□□□□□ -0.94
LSM3P3-201ENST00000436601 IL2RBP14784 551 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 DCTN1Q14203 1278 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 TMEM92Q6UXU6 159 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 GOPCQ9HD26 462 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 SPATA31A1Q5TZJ5 1347 aa9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 FAM208AQ9UK61 1670 aaKnown RBP9.19□□□□□ -0.94
LSM3P3-201ENST00000436601 GNAT3A8MTJ3 354 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 EVI5O60447 810 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 VPS72Q15906 364 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 MEX3CQ5U5Q3 659 aaKnown RBP9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 SPATA31A5Q5VU36 1347 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 DUSP27Q5VZP5 1158 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 ZNF530Q6P9A1 599 aaPredicted RBP9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 MCM10Q7L590 875 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 SPATA31A7Q8IWB4 1347 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 IL17REQ8NFR9 667 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 PLEKHG2Q9H7P9 1386 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 USP21Q9UK80 565 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 SPG7Q9UQ90 795 aa9.18□□□□□ -0.94
LSM3P3-201ENST00000436601 OVOS2A0A0G2JMS6 1433 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 MAP3K5Q99683 1374 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 IL16Q14005 1332 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 E9PSI1 815 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 PTGDRQ13258 359 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 AKAP4Q5JQC9 854 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 PTCD2Q8WV60 388 aaKnown RBP9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 LGR6Q9HBX8 967 aa9.17□□□□□ -0.94
LSM3P3-201ENST00000436601 DISP2A7MBM2 1401 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 AFF2P51816 1311 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 CYP27B1O15528 508 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 ZNF853P0CG23 659 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 PHKG2P15735 406 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 ZCRB1Q8TBF4 217 aaKnown RBP9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 RTF1Q92541 710 aaKnown RBP9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 THRAP3Q9Y2W1 955 aaKnown RBP9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 RGPD2P0DJD1 1756 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 PLCH1Q4KWH8 1693 aa9.16□□□□□ -0.94
LSM3P3-201ENST00000436601 NRAPQ86VF7 1730 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 SEC24BO95487 1268 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 FECHP22830 423 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 CALD1Q05682 793 aaKnown RBP9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 C1orf141Q5JVX7 400 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 MPRIPQ6WCQ1 1025 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 IFNL2Q8IZJ0 200 aa9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 TSR2Q969E8 191 aaKnown RBP9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 CCDC9Q9Y3X0 531 aaKnown RBP9.15□□□□□ -0.94
LSM3P3-201ENST00000436601 CEMIPQ8WUJ3 1361 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 FANCIQ9NVI1 1328 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 CHL1O00533 1208 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 RNMTO43148 476 aaKnown RBP9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 SLC34A2O95436 690 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 EVX2Q03828 476 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 FLIIQ13045 1269 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 CDCA7Q9BWT1 371 aaPredicted RBP9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 MYH16Q9H6N6 1097 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 ANO8Q9HCE9 1232 aaPredicted RBP9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 IFT57Q9NWB7 429 aa9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 LAS1LQ9Y4W2 734 aaKnown RBP9.14□□□□□ -0.95
LSM3P3-201ENST00000436601 PCDH11XQ9BZA7 1347 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 PCDH11YQ9BZA8 1340 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 EXOC5O00471 708 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 GNAI1P63096 354 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 DDX54Q8TDD1 881 aaKnown RBP9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 GJD4Q96KN9 370 aaPredicted RBP9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 MBIPQ9NS73 344 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 MIS18AQ9NYP9 233 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 NWD2Q9ULI1 1742 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 KDM6AO15550 1401 aaPredicted RBP9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 ATRNO75882 1429 aa9.13□□□□□ -0.95
LSM3P3-201ENST00000436601 PRIM1P49642 420 aaKnown RBP9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 TAF7Q15545 349 aaPredicted RBP9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 FAM98CQ17RN3 349 aaKnown RBP9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 DCAF5Q96JK2 942 aa9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 EPAS1Q99814 870 aa9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 QTRT2Q9H974 415 aaKnown RBP9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 TRPC5Q9UL62 973 aaPredicted RBP9.12□□□□□ -0.95
LSM3P3-201ENST00000436601 ONECUT3O60422 494 aaPredicted RBP9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 PHF14O94880 888 aa9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 HSP90AB1P08238 724 aaKnown RBP9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 EXOSC9Q06265 439 aaKnown RBP9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 DDB1Q16531 1140 aa9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 BABAM1Q9NWV8 329 aa9.11□□□□□ -0.95
LSM3P3-201ENST00000436601 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 TEFQ10587 303 aa9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 GIGYF2Q6Y7W6 1299 aaKnown RBP9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 MARCH10Q8NA82 808 aaPredicted RBP9.1□□□□□ -0.95
LSM3P3-201ENST00000436601 C8orf58Q8NAV2 365 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms