RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 COL5A3P25940 1745 aaPredicted RBP15.84■□□□□ 0.13
LINC00271-202ENST00000436554 SOS1Q07889 1333 aaPredicted RBP15.84■□□□□ 0.13
LINC00271-202ENST00000436554 ARFGEF1Q9Y6D6 1849 aa15.83■□□□□ 0.12
LINC00271-202ENST00000436554 SERPINB2P05120 415 aa15.83■□□□□ 0.12
LINC00271-202ENST00000436554 SLC39A6Q13433 755 aa15.83■□□□□ 0.12
LINC00271-202ENST00000436554 TTLL6Q8N841 843 aa15.83■□□□□ 0.12
LINC00271-202ENST00000436554 NARFQ9UHQ1 456 aa15.83■□□□□ 0.12
LINC00271-202ENST00000436554 IL13P35225 146 aa15.82■□□□□ 0.12
LINC00271-202ENST00000436554 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
LINC00271-202ENST00000436554 SLC52A2Q9HAB3 445 aa15.82■□□□□ 0.12
LINC00271-202ENST00000436554 ZC3H4Q9UPT8 1303 aaKnown RBP15.82■□□□□ 0.12
LINC00271-202ENST00000436554 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
LINC00271-202ENST00000436554 BCL2L12Q9HB09 334 aa15.81■□□□□ 0.12
LINC00271-202ENST00000436554 HSPA1AP0DMV8 641 aaKnown RBP15.8■□□□□ 0.12
LINC00271-202ENST00000436554 HSPA1BP0DMV9 641 aaKnown RBP15.8■□□□□ 0.12
LINC00271-202ENST00000436554 ZBTB1Q9Y2K1 713 aa15.8■□□□□ 0.12
LINC00271-202ENST00000436554 POTECB2RU33 542 aa15.79■□□□□ 0.12
LINC00271-202ENST00000436554 H0YIN7 160 aa15.79■□□□□ 0.12
LINC00271-202ENST00000436554 RNMTO43148 476 aaKnown RBP15.79■□□□□ 0.12
LINC00271-202ENST00000436554 TIMELESSQ9UNS1 1208 aa15.79■□□□□ 0.12
LINC00271-202ENST00000436554 SBF1O95248 1867 aa15.78■□□□□ 0.12
LINC00271-202ENST00000436554 NFKBIEO00221 500 aa15.78■□□□□ 0.12
LINC00271-202ENST00000436554 CANXP27824 592 aaKnown RBP15.78■□□□□ 0.12
LINC00271-202ENST00000436554 BICDL1Q6ZP65 573 aa15.78■□□□□ 0.12
LINC00271-202ENST00000436554 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
LINC00271-202ENST00000436554 COL15A1P39059 1388 aa15.76■□□□□ 0.11
LINC00271-202ENST00000436554 ZNF622Q969S3 477 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00271-202ENST00000436554 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
LINC00271-202ENST00000436554 TJP1Q07157 1748 aa15.75■□□□□ 0.11
LINC00271-202ENST00000436554 HMOX1P09601 288 aa15.75■□□□□ 0.11
LINC00271-202ENST00000436554 HSPA5P11021 654 aaKnown RBP15.75■□□□□ 0.11
LINC00271-202ENST00000436554 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
LINC00271-202ENST00000436554 PCGF6Q9BYE7 350 aa15.75■□□□□ 0.11
LINC00271-202ENST00000436554 TNRC6CQ9HCJ0 1690 aaKnown RBP15.74■□□□□ 0.11
LINC00271-202ENST00000436554 ADAMTS7Q9UKP4 1686 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 C21orf2O43822 256 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 EIF5P55010 431 aaKnown RBP15.74■□□□□ 0.11
LINC00271-202ENST00000436554 EIF4G2P78344 907 aaKnown RBP eCLIP15.74■□□□□ 0.11
LINC00271-202ENST00000436554 MTHFSDQ2M296 383 aaKnown RBP15.74■□□□□ 0.11
LINC00271-202ENST00000436554 ERFEQ4G0M1 354 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 CCDC24Q8N4L8 307 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 KNSTRNQ9Y448 316 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 CARMIL3Q8ND23 1372 aa15.74■□□□□ 0.11
LINC00271-202ENST00000436554 STARD3NLO95772 234 aa15.73■□□□□ 0.11
LINC00271-202ENST00000436554 TBC1D9BQ66K14 1250 aa15.73■□□□□ 0.11
LINC00271-202ENST00000436554 A0A087WZG4 1122 aa15.72■□□□□ 0.11
LINC00271-202ENST00000436554 PDE6BP35913 854 aa15.72■□□□□ 0.11
LINC00271-202ENST00000436554 BRIP1Q9BX63 1249 aa15.72■□□□□ 0.11
LINC00271-202ENST00000436554 MKRN1Q9UHC7 482 aaKnown RBP15.71■□□□□ 0.11
LINC00271-202ENST00000436554 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.11
LINC00271-202ENST00000436554 DDNO94850 711 aaPredicted RBP15.7■□□□□ 0.1
LINC00271-202ENST00000436554 CHADLQ6NUI6 762 aa15.7■□□□□ 0.1
LINC00271-202ENST00000436554 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
LINC00271-202ENST00000436554 PDZRN3Q9UPQ7 1066 aa15.7■□□□□ 0.1
LINC00271-202ENST00000436554 AFDNP55196 1824 aaKnown RBP15.7■□□□□ 0.1
LINC00271-202ENST00000436554 SCN11AQ9UI33 1791 aa15.7■□□□□ 0.1
LINC00271-202ENST00000436554 POTEIP0CG38 1075 aa15.69■□□□□ 0.1
LINC00271-202ENST00000436554 POTEJP0CG39 1038 aa15.69■□□□□ 0.1
LINC00271-202ENST00000436554 AMER1Q5JTC6 1135 aaPredicted RBP15.69■□□□□ 0.1
LINC00271-202ENST00000436554 PRR5LQ6MZQ0 368 aa15.69■□□□□ 0.1
LINC00271-202ENST00000436554 TTC5Q8N0Z6 440 aa15.69■□□□□ 0.1
LINC00271-202ENST00000436554 ZNF330Q9Y3S2 320 aaPredicted RBP15.69■□□□□ 0.1
LINC00271-202ENST00000436554 ZNF496Q96IT1 587 aaPredicted RBP15.68■□□□□ 0.1
LINC00271-202ENST00000436554 TAOK3Q9H2K8 898 aa15.68■□□□□ 0.1
LINC00271-202ENST00000436554 NRXN2Q9P2S2 1712 aa15.68■□□□□ 0.1
LINC00271-202ENST00000436554 CNKSR1Q969H4 720 aa15.67■□□□□ 0.1
LINC00271-202ENST00000436554 SETDB2Q96T68 719 aa15.67■□□□□ 0.1
LINC00271-202ENST00000436554 TEX13AQ9BXU3 409 aaPredicted RBP15.67■□□□□ 0.1
LINC00271-202ENST00000436554 DIAPH1O60610 1272 aaKnown RBP15.66■□□□□ 0.1
LINC00271-202ENST00000436554 A1BGP04217 495 aa15.66■□□□□ 0.1
LINC00271-202ENST00000436554 IL17REQ8NFR9 667 aa15.66■□□□□ 0.1
LINC00271-202ENST00000436554 LTBP3Q9NS15 1303 aa15.66■□□□□ 0.1
LINC00271-202ENST00000436554 MRC1P22897 1456 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 CCDC88AQ3V6T2 1871 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 NPHP1O15259 732 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 FOXN1O15353 648 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 SRGNP10124 158 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 IL6STP40189 918 aaPredicted RBP15.65■□□□□ 0.1
LINC00271-202ENST00000436554 STYK1Q6J9G0 422 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 ZNF790Q6PG37 636 aa15.65■□□□□ 0.1
LINC00271-202ENST00000436554 CAMTA2O94983 1202 aa15.64■□□□□ 0.09
LINC00271-202ENST00000436554 TEFQ10587 303 aa15.64■□□□□ 0.09
LINC00271-202ENST00000436554 PRPF40BQ6NWY9 871 aaKnown RBP15.64■□□□□ 0.09
LINC00271-202ENST00000436554 NPM2Q86SE8 214 aaKnown RBP15.64■□□□□ 0.09
LINC00271-202ENST00000436554 CNBD1Q8NA66 436 aa15.64■□□□□ 0.09
LINC00271-202ENST00000436554 HEG1Q9ULI3 1381 aa15.63■□□□□ 0.09
LINC00271-202ENST00000436554 MASTLQ96GX5 879 aa15.63■□□□□ 0.09
LINC00271-202ENST00000436554 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 IQCA1LA6NCM1 817 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 GNAT3A8MTJ3 354 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 KCNQ3O43525 872 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 ST5P78524 1137 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 LDHDQ86WU2 507 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 C7orf43Q8WVR3 580 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 FMNL2Q96PY5 1086 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 TAF1DQ9H5J8 278 aaPredicted RBP15.62■□□□□ 0.09
LINC00271-202ENST00000436554 PRDM10Q9NQV6 1147 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 PASKQ96RG2 1323 aa15.62■□□□□ 0.09
LINC00271-202ENST00000436554 CNTNAP1P78357 1384 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms