RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 SLC12A7Q9Y666 1083 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 CASTP20810 708 aaKnown RBP12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 MCM10Q7L590 875 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 ARAP1Q96P48 1450 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 ABCC11Q96J66 1382 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 PDE4BQ07343 736 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 KIAA1328Q86T90 577 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 ZNF213O14771 459 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 POLD1P28340 1107 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 KIF5BP33176 963 aa12.41□□□□□ -0.42
LDLRAD4-204ENST00000435606 TRAK2O60296 914 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 TEX14Q8IWB6 1497 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 FKBP15Q5T1M5 1219 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 CCDC112Q8NEF3 446 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 TTC21AQ8NDW8 1320 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 CDK13Q14004 1512 aaKnown RBP12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 CWC25Q9NXE8 425 aaPredicted RBP12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 USHBP1Q8N6Y0 703 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 CAMSAP2Q08AD1 1489 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 MIS18AQ9NYP9 233 aa12.4□□□□□ -0.42
LDLRAD4-204ENST00000435606 FANCIQ9NVI1 1328 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NF2P35240 595 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NBPF8Q3BBV2 869 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NBPF14Q5TI25 921 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NBPF6Q5VWK0 638 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 STXBP4Q6ZWJ1 553 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NBPF5PQ86XG9 351 aaPredicted RBP12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 NBPF4Q96M43 638 aa12.4□□□□□ -0.43
LDLRAD4-204ENST00000435606 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 TRAF1Q13077 416 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 GOLGA6L7A0A1B0GV03 622 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 CETN1Q12798 172 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 ZGPATQ8N5A5 531 aaKnown RBP12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 FERMT2Q96AC1 680 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 SSRP1Q08945 709 aaKnown RBP12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 CCDC152Q4G0S7 254 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 NUTM1Q86Y26 1132 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 NAIPQ13075 1403 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 SMARCC1Q92922 1105 aaPredicted RBP12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
LDLRAD4-204ENST00000435606 ERLIN1O75477 346 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 ALDH1L2Q3SY69 923 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 UPF3BQ9BZI7 483 aaKnown RBP12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 CCDC194A0A1B0GVG4 234 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 OGFOD1Q8N543 542 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 UBA5Q9GZZ9 404 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 DNAAF4Q8WXU2 420 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 MX1P20591 662 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 GPTP24298 496 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 NFKBIBQ15653 356 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 MTERF4Q7Z6M4 381 aaKnown RBP12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 SPC24Q8NBT2 197 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 SETDB2Q96T68 719 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 NUP62CLQ9H1M0 184 aa12.38□□□□□ -0.43
LDLRAD4-204ENST00000435606 CCDC91Q7Z6B0 441 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 BOLA2Q9H3K6 86 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 PTPN23Q9H3S7 1636 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 NLRP5P59047 1200 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 SPA17Q15506 151 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 LEKR1Q6ZMV7 388 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 TSPYL1Q9H0U9 437 aa12.37□□□□□ -0.43
LDLRAD4-204ENST00000435606 B4DLN1 442 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 MRPL12P52815 198 aaKnown RBP12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 TAX1BP1Q86VP1 789 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 PTPRCP08575 1304 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 CALRP27797 417 aaKnown RBP12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 AMPD3Q01432 767 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 KAT14Q9H8E8 782 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 IFIT3O14879 490 aaKnown RBP12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 EIF3JO75822 258 aaKnown RBP12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 CCDC178Q5BJE1 867 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 CACNA2D4Q7Z3S7 1137 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 CALML4Q96GE6 196 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 TNRQ92752 1358 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 FANCAO15360 1455 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 CRNKL1Q9BZJ0 848 aaKnown RBP12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 EXOC6BQ9Y2D4 811 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 NPHP3Q7Z494 1330 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 C8orf76Q96K31 380 aa12.36□□□□□ -0.43
LDLRAD4-204ENST00000435606 NME9Q86XW9 330 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 NYXQ9GZU5 481 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 CEBPAP49715 358 aaPredicted RBP12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 PLB1Q6P1J6 1458 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 HMGN5P82970 282 aaKnown RBP12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 LDHAL6AQ6ZMR3 332 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 FERMT1Q9BQL6 677 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 DDX11Q96FC9 970 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 PYM1Q9BRP8 204 aaKnown RBP12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 ANKRD24Q8TF21 1146 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 CENPHQ9H3R5 247 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 SAMM50Q9Y512 469 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 NSD2O96028 1365 aa12.35□□□□□ -0.43
LDLRAD4-204ENST00000435606 ZBTB3Q9H5J0 574 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 CA8P35219 290 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
LDLRAD4-204ENST00000435606 C8orf37Q96NL8 207 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms