RNA–Protein interactions for RNA: ENST00000435290.1

CX3CR1-204, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 4

Gene CX3CR1, Length 699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-204ENST00000435290 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
CX3CR1-204ENST00000435290 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.4
CX3CR1-204ENST00000435290 TM4SF1P30408 202 aa17.52■□□□□ 0.4
CX3CR1-204ENST00000435290 DNAJC10Q8IXB1 793 aa17.52■□□□□ 0.4
CX3CR1-204ENST00000435290 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.4
CX3CR1-204ENST00000435290 PANK3Q9H999 370 aa17.51■□□□□ 0.39
CX3CR1-204ENST00000435290 COL15A1P39059 1388 aa17.51■□□□□ 0.39
CX3CR1-204ENST00000435290 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
CX3CR1-204ENST00000435290 MORC1Q86VD1 984 aa17.5■□□□□ 0.39
CX3CR1-204ENST00000435290 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
CX3CR1-204ENST00000435290 FER1L6Q2WGJ9 1857 aa17.5■□□□□ 0.39
CX3CR1-204ENST00000435290 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
CX3CR1-204ENST00000435290 MRC1P22897 1456 aa17.49■□□□□ 0.39
CX3CR1-204ENST00000435290 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
CX3CR1-204ENST00000435290 LMNB1P20700 586 aa17.48■□□□□ 0.39
CX3CR1-204ENST00000435290 SLC39A6Q13433 755 aa17.48■□□□□ 0.39
CX3CR1-204ENST00000435290 NFIXQ14938 502 aa17.48■□□□□ 0.39
CX3CR1-204ENST00000435290 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
CX3CR1-204ENST00000435290 PRELPP51888 382 aa17.47■□□□□ 0.39
CX3CR1-204ENST00000435290 AKAP4Q5JQC9 854 aa17.47■□□□□ 0.39
CX3CR1-204ENST00000435290 ZBTB1Q9Y2K1 713 aa17.47■□□□□ 0.39
CX3CR1-204ENST00000435290 SCN7AQ01118 1682 aa17.47■□□□□ 0.39
CX3CR1-204ENST00000435290 CARMIL3Q8ND23 1372 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 SERPINB2P05120 415 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 CYP19A1P11511 503 aaPredicted RBP17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 VEGFAP15692 232 aaPredicted RBP17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 TTLL6Q8N841 843 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 NARFQ9UHQ1 456 aa17.46■□□□□ 0.39
CX3CR1-204ENST00000435290 C2CD5Q86YS7 1000 aa17.45■□□□□ 0.38
CX3CR1-204ENST00000435290 ARFGEF2Q9Y6D5 1785 aa17.44■□□□□ 0.38
CX3CR1-204ENST00000435290 HSPA1AP0DMV8 641 aaKnown RBP17.44■□□□□ 0.38
CX3CR1-204ENST00000435290 HSPA1BP0DMV9 641 aaKnown RBP17.44■□□□□ 0.38
CX3CR1-204ENST00000435290 IL13P35225 146 aa17.44■□□□□ 0.38
CX3CR1-204ENST00000435290 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
CX3CR1-204ENST00000435290 H0YIN7 160 aa17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 RNMTO43148 476 aaKnown RBP17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 HSPA5P11021 654 aaKnown RBP17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 EIF4G2P78344 907 aaKnown RBP eCLIP17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 PCGF6Q9BYE7 350 aa17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 BCL2L12Q9HB09 334 aa17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 SIPA1L3O60292 1781 aaPredicted RBP17.43■□□□□ 0.38
CX3CR1-204ENST00000435290 NFKBIEO00221 500 aa17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 HMOX1P09601 288 aa17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 CANXP27824 592 aaKnown RBP17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 SLX4Q8IY92 1834 aa17.42■□□□□ 0.38
CX3CR1-204ENST00000435290 BCORQ6W2J9 1755 aa17.41■□□□□ 0.38
CX3CR1-204ENST00000435290 ZNF622Q969S3 477 aaKnown RBP eCLIP17.4■□□□□ 0.38
CX3CR1-204ENST00000435290 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
CX3CR1-204ENST00000435290 DPY19L2Q6NUT2 758 aa17.39■□□□□ 0.37
CX3CR1-204ENST00000435290 ZNF330Q9Y3S2 320 aaPredicted RBP17.39■□□□□ 0.37
CX3CR1-204ENST00000435290 TTC5Q8N0Z6 440 aa17.38■□□□□ 0.37
CX3CR1-204ENST00000435290 CCDC24Q8N4L8 307 aa17.38■□□□□ 0.37
CX3CR1-204ENST00000435290 POTECB2RU33 542 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 C21orf2O43822 256 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 MTHFSDQ2M296 383 aaKnown RBP17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 ERFEQ4G0M1 354 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 TBC1D9BQ66K14 1250 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 VSIG10Q8N0Z9 540 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 SCN4AP35499 1836 aa17.37■□□□□ 0.37
CX3CR1-204ENST00000435290 STARD3NLO95772 234 aa17.36■□□□□ 0.37
CX3CR1-204ENST00000435290 NPHP1O15259 732 aa17.35■□□□□ 0.37
CX3CR1-204ENST00000435290 A0A087WZG4 1122 aa17.34■□□□□ 0.37
CX3CR1-204ENST00000435290 PDE6BP35913 854 aa17.34■□□□□ 0.37
CX3CR1-204ENST00000435290 EIF5P55010 431 aaKnown RBP17.34■□□□□ 0.37
CX3CR1-204ENST00000435290 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
CX3CR1-204ENST00000435290 TBC1D2BQ9UPU7 963 aa17.34■□□□□ 0.37
CX3CR1-204ENST00000435290 PRR5LQ6MZQ0 368 aa17.33■□□□□ 0.36
CX3CR1-204ENST00000435290 HEG1Q9ULI3 1381 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 POTEIP0CG38 1075 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 POTEJP0CG39 1038 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 CHADLQ6NUI6 762 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 BRIP1Q9BX63 1249 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 TAOK3Q9H2K8 898 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 PDZRN3Q9UPQ7 1066 aa17.32■□□□□ 0.36
CX3CR1-204ENST00000435290 CLSPNQ9HAW4 1339 aa17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 DDNO94850 711 aaPredicted RBP17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 TEFQ10587 303 aa17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 ZNF496Q96IT1 587 aaPredicted RBP17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 CREBZFQ9NS37 354 aa17.31■□□□□ 0.36
CX3CR1-204ENST00000435290 NPM2Q86SE8 214 aaKnown RBP17.3■□□□□ 0.36
CX3CR1-204ENST00000435290 CNBD1Q8NA66 436 aa17.3■□□□□ 0.36
CX3CR1-204ENST00000435290 LTBP3Q9NS15 1303 aa17.29■□□□□ 0.36
CX3CR1-204ENST00000435290 ST5P78524 1137 aa17.29■□□□□ 0.36
CX3CR1-204ENST00000435290 ZNF790Q6PG37 636 aa17.29■□□□□ 0.36
CX3CR1-204ENST00000435290 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
CX3CR1-204ENST00000435290 IL6STP40189 918 aaPredicted RBP17.28■□□□□ 0.36
CX3CR1-204ENST00000435290 CC2D1BQ5T0F9 858 aaKnown RBP17.28■□□□□ 0.36
CX3CR1-204ENST00000435290 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
CX3CR1-204ENST00000435290 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
CX3CR1-204ENST00000435290 TEX13AQ9BXU3 409 aaPredicted RBP17.28■□□□□ 0.36
CX3CR1-204ENST00000435290 U2SURPO15042 1029 aaKnown RBP17.27■□□□□ 0.36
CX3CR1-204ENST00000435290 A1BGP04217 495 aa17.27■□□□□ 0.36
CX3CR1-204ENST00000435290 GNAT3A8MTJ3 354 aa17.26■□□□□ 0.35
CX3CR1-204ENST00000435290 FOXN1O15353 648 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms