RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 HYPKQ9NX55 129 aa20.57■□□□□ 0.88
LIMK1-203ENST00000435201 STAP2Q9UGK3 403 aa20.57■□□□□ 0.88
LIMK1-203ENST00000435201 CPDO75976 1380 aa20.57■□□□□ 0.88
LIMK1-203ENST00000435201 PKD1L3Q7Z443 1732 aa20.57■□□□□ 0.88
LIMK1-203ENST00000435201 MEGF6O75095 1541 aa20.56■□□□□ 0.88
LIMK1-203ENST00000435201 K7ELQ4 463 aaPredicted RBP20.56■□□□□ 0.88
LIMK1-203ENST00000435201 CIZ1Q9ULV3 898 aaPredicted RBP20.56■□□□□ 0.88
LIMK1-203ENST00000435201 KDM6AO15550 1401 aaPredicted RBP20.56■□□□□ 0.88
LIMK1-203ENST00000435201 ERC2O15083 957 aa20.56■□□□□ 0.88
LIMK1-203ENST00000435201 ALDH1L1O75891 902 aa20.56■□□□□ 0.88
LIMK1-203ENST00000435201 DDIT3P35638 169 aa20.56■□□□□ 0.88
LIMK1-203ENST00000435201 PPP1R42Q7Z4L9 355 aa20.56■□□□□ 0.88
LIMK1-203ENST00000435201 ANXA1P04083 346 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 CSB-PGBD3P0DP91 1061 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 PHKG2P15735 406 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 KSR2Q6VAB6 950 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 SLC52A2Q9HAB3 445 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 HDAC5Q9UQL6 1122 aa20.55■□□□□ 0.88
LIMK1-203ENST00000435201 MRC1P22897 1456 aa20.54■□□□□ 0.88
LIMK1-203ENST00000435201 NBPF7P0C2Y1 421 aaPredicted RBP20.54■□□□□ 0.88
LIMK1-203ENST00000435201 IFNL2Q8IZJ0 200 aa20.54■□□□□ 0.88
LIMK1-203ENST00000435201 SRGAP3O43295 1099 aa20.53■□□□□ 0.88
LIMK1-203ENST00000435201 HSP90AB4PQ58FF6 505 aa20.53■□□□□ 0.88
LIMK1-203ENST00000435201 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
LIMK1-203ENST00000435201 MAP3K2Q9Y2U5 619 aa20.53■□□□□ 0.88
LIMK1-203ENST00000435201 C5P01031 1676 aa20.53■□□□□ 0.88
LIMK1-203ENST00000435201 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
LIMK1-203ENST00000435201 DDX58O95786 925 aaKnown RBP20.52■□□□□ 0.88
LIMK1-203ENST00000435201 HSPA2P54652 639 aa20.52■□□□□ 0.88
LIMK1-203ENST00000435201 ZNF790Q6PG37 636 aa20.52■□□□□ 0.88
LIMK1-203ENST00000435201 MTX1Q13505 466 aa20.52■□□□□ 0.87
LIMK1-203ENST00000435201 PROSER3Q2NL68 480 aa20.52■□□□□ 0.87
LIMK1-203ENST00000435201 CABLES1Q8TDN4 633 aa20.52■□□□□ 0.87
LIMK1-203ENST00000435201 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.87
LIMK1-203ENST00000435201 CD2BP2O95400 341 aaKnown RBP20.51■□□□□ 0.87
LIMK1-203ENST00000435201 KIF1BPQ96EK5 621 aa20.51■□□□□ 0.87
LIMK1-203ENST00000435201 PARP4Q9UKK3 1724 aaKnown RBP20.51■□□□□ 0.87
LIMK1-203ENST00000435201 HSP90AA1P07900 732 aaKnown RBP20.5■□□□□ 0.87
LIMK1-203ENST00000435201 MCM4P33991 863 aa20.5■□□□□ 0.87
LIMK1-203ENST00000435201 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
LIMK1-203ENST00000435201 DCAF5Q96JK2 942 aa20.5■□□□□ 0.87
LIMK1-203ENST00000435201 PRAMEF22A3QJZ6 481 aa20.49■□□□□ 0.87
LIMK1-203ENST00000435201 CHRNA2Q15822 529 aa20.49■□□□□ 0.87
LIMK1-203ENST00000435201 TSHZ3Q63HK5 1081 aa20.49■□□□□ 0.87
LIMK1-203ENST00000435201 C9orf78Q9NZ63 289 aaPredicted RBP20.49■□□□□ 0.87
LIMK1-203ENST00000435201 BRINP3Q76B58 766 aa20.48■□□□□ 0.87
LIMK1-203ENST00000435201 LINS1Q8NG48 757 aa20.48■□□□□ 0.87
LIMK1-203ENST00000435201 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
LIMK1-203ENST00000435201 TRIM6-TRIM34B2RNG4 842 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 ESYT1Q9BSJ8 1104 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 IL1RAPL2Q9NP60 686 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 PDIA6Q15084 440 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 NFATC2IPQ8NCF5 419 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 AK9Q5TCS8 1911 aa20.47■□□□□ 0.87
LIMK1-203ENST00000435201 UTYO14607 1347 aa20.46■□□□□ 0.87
LIMK1-203ENST00000435201 ST18O60284 1047 aa20.46■□□□□ 0.87
LIMK1-203ENST00000435201 CHMLP26374 656 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 SLC39A6Q13433 755 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 RILPL2Q969X0 211 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 DDX11L8A8MPP1 907 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 CYP27B1O15528 508 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 TTC5Q8N0Z6 440 aa20.45■□□□□ 0.86
LIMK1-203ENST00000435201 EPB41L2O43491 1005 aaKnown RBP20.44■□□□□ 0.86
LIMK1-203ENST00000435201 MCCP23508 829 aa20.44■□□□□ 0.86
LIMK1-203ENST00000435201 RAB3GAP1Q15042 981 aa20.44■□□□□ 0.86
LIMK1-203ENST00000435201 LARP1Q6PKG0 1096 aaKnown RBP20.44■□□□□ 0.86
LIMK1-203ENST00000435201 NUTM1Q86Y26 1132 aa20.44■□□□□ 0.86
LIMK1-203ENST00000435201 LAMB4A4D0S4 1761 aa20.44■□□□□ 0.86
LIMK1-203ENST00000435201 GRM8O00222 908 aa20.43■□□□□ 0.86
LIMK1-203ENST00000435201 CWF19L2Q2TBE0 894 aaKnown RBP20.43■□□□□ 0.86
LIMK1-203ENST00000435201 ERC1Q8IUD2 1116 aa20.43■□□□□ 0.86
LIMK1-203ENST00000435201 SOS2Q07890 1332 aaPredicted RBP20.43■□□□□ 0.86
LIMK1-203ENST00000435201 USP42Q9H9J4 1324 aaKnown RBP20.43■□□□□ 0.86
LIMK1-203ENST00000435201 SNRPA1P09661 255 aaKnown RBP20.43■□□□□ 0.86
LIMK1-203ENST00000435201 OS9Q13438 667 aaPredicted RBP20.43■□□□□ 0.86
LIMK1-203ENST00000435201 TTC41PQ6P2S7 1318 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 PI4K2BQ8TCG2 481 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 ZNF496Q96IT1 587 aaPredicted RBP20.42■□□□□ 0.86
LIMK1-203ENST00000435201 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 FMNL2Q96PY5 1086 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 ABCA3Q99758 1704 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 WDR17Q8IZU2 1322 aa20.42■□□□□ 0.86
LIMK1-203ENST00000435201 NEXNQ0ZGT2 675 aa20.41■□□□□ 0.86
LIMK1-203ENST00000435201 AIMP1Q12904 312 aaKnown RBP20.41■□□□□ 0.86
LIMK1-203ENST00000435201 ANAPC15P60006 121 aa20.41■□□□□ 0.86
LIMK1-203ENST00000435201 TNPO1Q92973 898 aaKnown RBP20.41■□□□□ 0.86
LIMK1-203ENST00000435201 PRDM11Q9NQV5 511 aa20.41■□□□□ 0.86
LIMK1-203ENST00000435201 CABP4P57796 275 aa20.4■□□□□ 0.86
LIMK1-203ENST00000435201 PTMSP20962 102 aa20.39■□□□□ 0.86
LIMK1-203ENST00000435201 UNC5CLQ8IV45 518 aa20.39■□□□□ 0.86
LIMK1-203ENST00000435201 CNTROBQ8N137 903 aa20.39■□□□□ 0.86
LIMK1-203ENST00000435201 CLASRPQ8N2M8 674 aaKnown RBP20.39■□□□□ 0.86
LIMK1-203ENST00000435201 SLAIN2Q9P270 581 aa20.39■□□□□ 0.86
LIMK1-203ENST00000435201 GLI3P10071 1580 aa20.39■□□□□ 0.85
LIMK1-203ENST00000435201 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
LIMK1-203ENST00000435201 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
LIMK1-203ENST00000435201 MYL6BP14649 208 aa20.39■□□□□ 0.85
LIMK1-203ENST00000435201 XAGE3Q8WTP9 111 aa20.39■□□□□ 0.85
LIMK1-203ENST00000435201 ANO2Q9NQ90 1003 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms