RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-204ENST00000434728 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP1-204ENST00000434728 CC2D1BQ5T0F9 858 aaKnown RBP18.1■□□□□ 0.49
CDC42EP1-204ENST00000434728 MRC1P22897 1456 aa18.09■□□□□ 0.49
CDC42EP1-204ENST00000434728 RBM46Q8TBY0 533 aaKnown RBP18.09■□□□□ 0.49
CDC42EP1-204ENST00000434728 KCPQ6ZWJ8 1503 aa18.08■□□□□ 0.49
CDC42EP1-204ENST00000434728 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
CDC42EP1-204ENST00000434728 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
CDC42EP1-204ENST00000434728 TM4SF1P30408 202 aa18.08■□□□□ 0.48
CDC42EP1-204ENST00000434728 NARFQ9UHQ1 456 aa18.08■□□□□ 0.48
CDC42EP1-204ENST00000434728 ZBTB1Q9Y2K1 713 aa18.08■□□□□ 0.48
CDC42EP1-204ENST00000434728 AFDNP55196 1824 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 ADAMTS7Q9UKP4 1686 aa18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 U2SURPO15042 1029 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 STARD3NLO95772 234 aa18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 NFIXQ14938 502 aa18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 MTHFSDQ2M296 383 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 NPM2Q86SE8 214 aaKnown RBP18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 ZNF330Q9Y3S2 320 aaPredicted RBP18.07■□□□□ 0.48
CDC42EP1-204ENST00000434728 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CDC42EP1-204ENST00000434728 TEFQ10587 303 aa18.06■□□□□ 0.48
CDC42EP1-204ENST00000434728 BICDL1Q6ZP65 573 aa18.06■□□□□ 0.48
CDC42EP1-204ENST00000434728 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
CDC42EP1-204ENST00000434728 WDR90Q96KV7 1748 aa18.06■□□□□ 0.48
CDC42EP1-204ENST00000434728 SBF1O95248 1867 aa18.05■□□□□ 0.48
CDC42EP1-204ENST00000434728 SERPINB2P05120 415 aa18.05■□□□□ 0.48
CDC42EP1-204ENST00000434728 RASSF7Q02833 373 aa18.05■□□□□ 0.48
CDC42EP1-204ENST00000434728 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
CDC42EP1-204ENST00000434728 A0A087WZG4 1122 aa18.04■□□□□ 0.48
CDC42EP1-204ENST00000434728 NPHP1O15259 732 aa18.04■□□□□ 0.48
CDC42EP1-204ENST00000434728 FSTL1Q12841 308 aa18.04■□□□□ 0.48
CDC42EP1-204ENST00000434728 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
CDC42EP1-204ENST00000434728 TTLL6Q8N841 843 aa18.04■□□□□ 0.48
CDC42EP1-204ENST00000434728 H0YIN7 160 aa18.03■□□□□ 0.48
CDC42EP1-204ENST00000434728 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.48
CDC42EP1-204ENST00000434728 LMNB1P20700 586 aa18.02■□□□□ 0.48
CDC42EP1-204ENST00000434728 GAS2L2Q8NHY3 880 aa18.02■□□□□ 0.48
CDC42EP1-204ENST00000434728 DLEC1Q9Y238 1755 aa18.02■□□□□ 0.47
CDC42EP1-204ENST00000434728 ZC3H4Q9UPT8 1303 aaKnown RBP18.01■□□□□ 0.47
CDC42EP1-204ENST00000434728 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
CDC42EP1-204ENST00000434728 GNAT3A8MTJ3 354 aa18.01■□□□□ 0.47
CDC42EP1-204ENST00000434728 SMC1BQ8NDV3 1235 aa18.01■□□□□ 0.47
CDC42EP1-204ENST00000434728 ZNF622Q969S3 477 aaKnown RBP eCLIP18■□□□□ 0.47
CDC42EP1-204ENST00000434728 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
CDC42EP1-204ENST00000434728 CCDC88AQ3V6T2 1871 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 TIAM2Q8IVF5 1701 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 HTRA3P83110 453 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 ZNF790Q6PG37 636 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 DNAJC5GQ8N7S2 189 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
CDC42EP1-204ENST00000434728 PDE6BP35913 854 aa17.98■□□□□ 0.47
CDC42EP1-204ENST00000434728 ZNF496Q96IT1 587 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP1-204ENST00000434728 CFAP53Q96M91 514 aa17.98■□□□□ 0.47
CDC42EP1-204ENST00000434728 ZNF219Q9P2Y4 722 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP1-204ENST00000434728 HEG1Q9ULI3 1381 aa17.98■□□□□ 0.47
CDC42EP1-204ENST00000434728 CARMIL3Q8ND23 1372 aa17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 VEGFAP15692 232 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 EIF5P55010 431 aaKnown RBP17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 KLRG1Q96E93 195 aa17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 FMNL2Q96PY5 1086 aa17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
CDC42EP1-204ENST00000434728 SCN7AQ01118 1682 aa17.96■□□□□ 0.47
CDC42EP1-204ENST00000434728 GLTPD2A6NH11 291 aa17.96■□□□□ 0.47
CDC42EP1-204ENST00000434728 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
CDC42EP1-204ENST00000434728 DPY19L2Q6NUT2 758 aa17.95■□□□□ 0.46
CDC42EP1-204ENST00000434728 SETDB2Q96T68 719 aa17.95■□□□□ 0.46
CDC42EP1-204ENST00000434728 COL3A1P02461 1466 aaPredicted RBP17.95■□□□□ 0.46
CDC42EP1-204ENST00000434728 BTBD11A6QL63 1104 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 IL6STP40189 918 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 ST5P78524 1137 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 CNBD1Q8NA66 436 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 IL17REQ8NFR9 667 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 SIPA1L3O60292 1781 aaPredicted RBP17.94■□□□□ 0.46
CDC42EP1-204ENST00000434728 NPC1L1Q9UHC9 1359 aa17.93■□□□□ 0.46
CDC42EP1-204ENST00000434728 C21orf2O43822 256 aa17.93■□□□□ 0.46
CDC42EP1-204ENST00000434728 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
CDC42EP1-204ENST00000434728 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
CDC42EP1-204ENST00000434728 NUDCQ9Y266 331 aa17.93■□□□□ 0.46
CDC42EP1-204ENST00000434728 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 ANKRD31Q8N7Z5 1873 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 NFKBIEO00221 500 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 A1BGP04217 495 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 ERFEQ4G0M1 354 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 PRR5LQ6MZQ0 368 aa17.92■□□□□ 0.46
CDC42EP1-204ENST00000434728 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
CDC42EP1-204ENST00000434728 COL11A2P13942 1736 aaPredicted RBP17.9■□□□□ 0.46
CDC42EP1-204ENST00000434728 CNKSR1Q969H4 720 aa17.9■□□□□ 0.46
CDC42EP1-204ENST00000434728 TAOK3Q9H2K8 898 aa17.9■□□□□ 0.46
CDC42EP1-204ENST00000434728 PRELPP51888 382 aa17.89■□□□□ 0.45
CDC42EP1-204ENST00000434728 SOGA3Q5TF21 947 aa17.89■□□□□ 0.45
CDC42EP1-204ENST00000434728 JMYQ8N9B5 988 aa17.89■□□□□ 0.45
CDC42EP1-204ENST00000434728 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
CDC42EP1-204ENST00000434728 DICER1Q9UPY3 1922 aaKnown RBP17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 CAMTA2O94983 1202 aa17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 U2AF1L5P0DN76 240 aaPredicted RBP17.88■□□□□ 0.45
CDC42EP1-204ENST00000434728 U2AF1Q01081 240 aaKnown RBP eCLIP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1545.5 ms