RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 TCEANC2Q96MN5 208 aa18.99■□□□□ 0.63
SCARF1-203ENST00000434376 KIAA0232Q92628 1395 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
SCARF1-203ENST00000434376 PPFIA3O75145 1194 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 REC8O95072 547 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 MRE11P49959 708 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 ARHGEF25Q86VW2 580 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 MYD88Q99836 296 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 ITSN1Q15811 1721 aa18.98■□□□□ 0.63
SCARF1-203ENST00000434376 RHPN1Q8TCX5 695 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 EDC3Q96F86 508 aaKnown RBP18.97■□□□□ 0.63
SCARF1-203ENST00000434376 USP16Q9Y5T5 823 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 ST18O60284 1047 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 ESPNB1AK53 854 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 COPS6Q7L5N1 327 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 TTC5Q8N0Z6 440 aa18.97■□□□□ 0.63
SCARF1-203ENST00000434376 SYTL4Q96C24 671 aaPredicted RBP18.97■□□□□ 0.63
SCARF1-203ENST00000434376 ANKRD26Q9UPS8 1709 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 TOM1L2Q6ZVM7 507 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 ZMYND15Q9H091 742 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 AACSQ86V21 672 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 MPNDQ8N594 471 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 BOLA2Q9H3K6 86 aa18.96■□□□□ 0.63
SCARF1-203ENST00000434376 PRPF40AO75400 957 aaKnown RBP18.95■□□□□ 0.62
SCARF1-203ENST00000434376 AKAP4Q5JQC9 854 aa18.95■□□□□ 0.62
SCARF1-203ENST00000434376 XAGE3Q8WTP9 111 aa18.95■□□□□ 0.62
SCARF1-203ENST00000434376 GBP4Q96PP9 640 aa18.95■□□□□ 0.62
SCARF1-203ENST00000434376 PRDM11Q9NQV5 511 aa18.95■□□□□ 0.62
SCARF1-203ENST00000434376 SSH2Q76I76 1423 aa18.95■□□□□ 0.62
SCARF1-203ENST00000434376 ZNF496Q96IT1 587 aaPredicted RBP18.95■□□□□ 0.62
SCARF1-203ENST00000434376 IFIT2P09913 472 aaKnown RBP18.95■□□□□ 0.62
SCARF1-203ENST00000434376 TATP17735 454 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-203ENST00000434376 CLCN1P35523 988 aa18.94■□□□□ 0.62
SCARF1-203ENST00000434376 CAVIN1Q6NZI2 390 aaKnown RBP18.94■□□□□ 0.62
SCARF1-203ENST00000434376 RBM27Q9P2N5 1060 aaKnown RBP18.94■□□□□ 0.62
SCARF1-203ENST00000434376 DBF4Q9UBU7 674 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-203ENST00000434376 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.94■□□□□ 0.62
SCARF1-203ENST00000434376 KDRP35968 1356 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 REREQ9P2R6 1566 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-203ENST00000434376 CHGBP05060 677 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 RABEP1Q15276 862 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 C19orf44Q9H6X5 657 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 GOLGB1Q14789 3259 aaKnown RBP18.93■□□□□ 0.62
SCARF1-203ENST00000434376 DDX11L8A8MPP1 907 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 GIGYF1O75420 1035 aaPredicted RBP18.93■□□□□ 0.62
SCARF1-203ENST00000434376 AK9Q5TCS8 1911 aa18.93■□□□□ 0.62
SCARF1-203ENST00000434376 KIAA1211Q6ZU35 1233 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 C3P01024 1663 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 UBE3BQ7Z3V4 1068 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 ESYT1Q9BSJ8 1104 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 ZBTB3Q9H5J0 574 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 CHMLP26374 656 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 ANP32BQ92688 251 aaKnown RBP18.92■□□□□ 0.62
SCARF1-203ENST00000434376 BICC1Q9H694 974 aaKnown RBP18.92■□□□□ 0.62
SCARF1-203ENST00000434376 DIAPH3Q9NSV4 1193 aa18.92■□□□□ 0.62
SCARF1-203ENST00000434376 FAM177BA6PVY3 158 aa18.91■□□□□ 0.62
SCARF1-203ENST00000434376 GOLGA6L22H0YM25 854 aa18.91■□□□□ 0.62
SCARF1-203ENST00000434376 BEND3Q5T5X7 828 aa18.91■□□□□ 0.62
SCARF1-203ENST00000434376 CLASRPQ8N2M8 674 aaKnown RBP18.91■□□□□ 0.62
SCARF1-203ENST00000434376 ERBB4Q15303 1308 aa18.91■□□□□ 0.62
SCARF1-203ENST00000434376 CABP4P57796 275 aa18.91■□□□□ 0.62
SCARF1-203ENST00000434376 NAP1L2Q9ULW6 460 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-203ENST00000434376 FSD2A1L4K1 749 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 FOSBP53539 338 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 SUCLG2Q96I99 432 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 TLR7Q9NYK1 1049 aaKnown RBP18.9■□□□□ 0.62
SCARF1-203ENST00000434376 TMEM94Q12767 1356 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 EVA1CP58658 441 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 GAS2L3Q86XJ1 694 aa18.9■□□□□ 0.62
SCARF1-203ENST00000434376 DNAJC2Q99543 621 aaKnown RBP18.9■□□□□ 0.62
SCARF1-203ENST00000434376 G3BP1Q13283 466 aaKnown RBP eCLIP18.89■□□□□ 0.62
SCARF1-203ENST00000434376 RNF214Q8ND24 703 aa18.89■□□□□ 0.62
SCARF1-203ENST00000434376 MCCP23508 829 aa18.89■□□□□ 0.61
SCARF1-203ENST00000434376 NEUROD6Q96NK8 337 aa18.89■□□□□ 0.61
SCARF1-203ENST00000434376 RBM10P98175 930 aaKnown RBP18.89■□□□□ 0.61
SCARF1-203ENST00000434376 ZNF790Q6PG37 636 aa18.89■□□□□ 0.61
SCARF1-203ENST00000434376 MON2Q7Z3U7 1717 aa18.88■□□□□ 0.61
SCARF1-203ENST00000434376 TMX3Q96JJ7 454 aa18.88■□□□□ 0.61
SCARF1-203ENST00000434376 HTATSF1O43719 755 aaKnown RBP18.88■□□□□ 0.61
SCARF1-203ENST00000434376 SLFNL1Q499Z3 407 aa18.88■□□□□ 0.61
SCARF1-203ENST00000434376 BAG4O95429 457 aaKnown RBP18.87■□□□□ 0.61
SCARF1-203ENST00000434376 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
SCARF1-203ENST00000434376 AMOTQ4VCS5 1084 aa18.87■□□□□ 0.61
SCARF1-203ENST00000434376 SNX21Q969T3 373 aa18.87■□□□□ 0.61
SCARF1-203ENST00000434376 KIF1BPQ96EK5 621 aa18.87■□□□□ 0.61
SCARF1-203ENST00000434376 PRPF40BQ6NWY9 871 aaKnown RBP18.87■□□□□ 0.61
SCARF1-203ENST00000434376 PXDNQ92626 1479 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 A1BGP04217 495 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
SCARF1-203ENST00000434376 ERBB3P21860 1342 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 STK3Q13188 491 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 EPHA10Q5JZY3 1008 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 FER1L4A9Z1Z3 1794 aa18.86■□□□□ 0.61
SCARF1-203ENST00000434376 KSR2Q6VAB6 950 aa18.85■□□□□ 0.61
SCARF1-203ENST00000434376 PLCB2Q00722 1185 aa18.85■□□□□ 0.61
SCARF1-203ENST00000434376 RAB3GAP1Q15042 981 aa18.85■□□□□ 0.61
SCARF1-203ENST00000434376 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
SCARF1-203ENST00000434376 KNDC1Q76NI1 1749 aa18.85■□□□□ 0.61
SCARF1-203ENST00000434376 CYP27B1O15528 508 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms