RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CD163L1Q9NR16 1453 aa9.65□□□□□ -0.87
COL17A1-204ENST00000433822 FAM135BQ49AJ0 1406 aa9.65□□□□□ -0.87
COL17A1-204ENST00000433822 A0A1W2PP64 1363 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 PNPLA6Q8IY17 1366 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 KIF20BQ96Q89 1820 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 MORN1Q5T089 497 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 TMEM132EQ6IEE7 984 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 WWC1Q8IX03 1113 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 CYP4X1Q8N118 509 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL17A1-204ENST00000433822 RTN4Q9NQC3 1192 aaKnown RBP9.64□□□□□ -0.87
COL17A1-204ENST00000433822 FCF1Q9Y324 198 aaKnown RBP9.64□□□□□ -0.87
COL17A1-204ENST00000433822 LRRC7Q96NW7 1537 aa9.64□□□□□ -0.87
COL17A1-204ENST00000433822 ANP32AP39687 249 aaKnown RBP9.63□□□□□ -0.87
COL17A1-204ENST00000433822 CTC1Q2NKJ3 1217 aa9.63□□□□□ -0.87
COL17A1-204ENST00000433822 THAP11Q96EK4 314 aa9.63□□□□□ -0.87
COL17A1-204ENST00000433822 CRBNQ96SW2 442 aa9.63□□□□□ -0.87
COL17A1-204ENST00000433822 DAXXQ9UER7 740 aaPredicted RBP9.63□□□□□ -0.87
COL17A1-204ENST00000433822 SALL2Q9Y467 1007 aaPredicted RBP9.63□□□□□ -0.87
COL17A1-204ENST00000433822 RIMS2Q9UQ26 1411 aa9.63□□□□□ -0.87
COL17A1-204ENST00000433822 IL16Q14005 1332 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 SEMA3EO15041 775 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 AXIN1O15169 862 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
COL17A1-204ENST00000433822 ATP6V1AP38606 617 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 RDH13Q8NBN7 331 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 PNNQ9H307 717 aaKnown RBP9.62□□□□□ -0.87
COL17A1-204ENST00000433822 NRXN3Q9Y4C0 1643 aa9.62□□□□□ -0.87
COL17A1-204ENST00000433822 MTHFSP49914 203 aa9.61□□□□□ -0.87
COL17A1-204ENST00000433822 FUT2Q10981 343 aa9.61□□□□□ -0.87
COL17A1-204ENST00000433822 IPO9Q96P70 1041 aaKnown RBP9.61□□□□□ -0.87
COL17A1-204ENST00000433822 BACH2Q9BYV9 841 aa9.61□□□□□ -0.87
COL17A1-204ENST00000433822 DACH1Q9UI36 760 aa9.61□□□□□ -0.87
COL17A1-204ENST00000433822 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
COL17A1-204ENST00000433822 HDGFL2Q7Z4V5 671 aaPredicted RBP9.6□□□□□ -0.87
COL17A1-204ENST00000433822 FAM160A2Q8N612 972 aaPredicted RBP9.6□□□□□ -0.87
COL17A1-204ENST00000433822 MYH16Q9H6N6 1097 aa9.6□□□□□ -0.87
COL17A1-204ENST00000433822 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
COL17A1-204ENST00000433822 CPSF1Q10570 1443 aaKnown RBP9.59□□□□□ -0.87
COL17A1-204ENST00000433822 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
COL17A1-204ENST00000433822 CCDC146Q8IYE0 955 aa9.59□□□□□ -0.87
COL17A1-204ENST00000433822 TCP11L2Q8N4U5 519 aa9.59□□□□□ -0.87
COL17A1-204ENST00000433822 GMPR2Q9P2T1 348 aaKnown RBP9.59□□□□□ -0.87
COL17A1-204ENST00000433822 AATKQ6ZMQ8 1374 aa9.59□□□□□ -0.87
COL17A1-204ENST00000433822 ROBO1Q9Y6N7 1651 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 EDC4Q6P2E9 1401 aaKnown RBP9.58□□□□□ -0.88
COL17A1-204ENST00000433822 DDX11L8A8MPP1 907 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 ZBTB24O43167 697 aaPredicted RBP9.58□□□□□ -0.88
COL17A1-204ENST00000433822 PLIN1O60240 522 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 WFS1O76024 890 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 POGKQ9P215 609 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 SLC27A5Q9Y2P5 690 aa9.58□□□□□ -0.88
COL17A1-204ENST00000433822 NPHP4O75161 1426 aaPredicted RBP9.57□□□□□ -0.88
COL17A1-204ENST00000433822 PPIP5K1Q6PFW1 1433 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 MON2Q7Z3U7 1717 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 VIRMAQ69YN4 1812 aaKnown RBP9.57□□□□□ -0.88
COL17A1-204ENST00000433822 FYB1O15117 783 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 GNPATO15228 680 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 SRPK2P78362 688 aaKnown RBP9.57□□□□□ -0.88
COL17A1-204ENST00000433822 FBXO31Q5XUX0 539 aaPredicted RBP9.57□□□□□ -0.88
COL17A1-204ENST00000433822 SULF1Q8IWU6 871 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 ZNF428Q96B54 188 aa9.57□□□□□ -0.88
COL17A1-204ENST00000433822 UBR1Q8IWV7 1749 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 AKAP12Q02952 1782 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 CDK12Q9NYV4 1490 aaPredicted RBP9.56□□□□□ -0.88
COL17A1-204ENST00000433822 TTC24A2A3L6 582 aaPredicted RBP9.56□□□□□ -0.88
COL17A1-204ENST00000433822 GCGRP47871 477 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 RARSP54136 660 aaKnown RBP9.56□□□□□ -0.88
COL17A1-204ENST00000433822 C20orf194Q5TEA3 1177 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 SMYD5Q6GMV2 418 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 DDRGK1Q96HY6 314 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 PLEKHF1Q96S99 279 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 MAPK8IP3Q9UPT6 1336 aa9.56□□□□□ -0.88
COL17A1-204ENST00000433822 TNRQ92752 1358 aa9.55□□□□□ -0.88
COL17A1-204ENST00000433822 SENP3-EIF4A1A0A087X0R7 540 aa9.55□□□□□ -0.88
COL17A1-204ENST00000433822 BRICD5Q6PL45 260 aa9.55□□□□□ -0.88
COL17A1-204ENST00000433822 CDK19Q9BWU1 502 aa9.55□□□□□ -0.88
COL17A1-204ENST00000433822 FECHP22830 423 aa9.54□□□□□ -0.88
COL17A1-204ENST00000433822 BRPF1P55201 1214 aaPredicted RBP9.54□□□□□ -0.88
COL17A1-204ENST00000433822 MSS51Q4VC12 460 aa9.54□□□□□ -0.88
COL17A1-204ENST00000433822 RBM26Q5T8P6 1007 aaKnown RBP9.54□□□□□ -0.88
COL17A1-204ENST00000433822 PMFBP1Q8TBY8 1022 aa9.54□□□□□ -0.88
COL17A1-204ENST00000433822 CLUAP1Q96AJ1 413 aa9.54□□□□□ -0.88
COL17A1-204ENST00000433822 DIP2AQ14689 1571 aa9.54□□□□□ -0.88
COL17A1-204ENST00000433822 PHLPP1O60346 1717 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 TMEM2Q9UHN6 1383 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 PLEKHG1Q9ULL1 1385 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 U2AF1L5P0DN76 240 aaPredicted RBP9.53□□□□□ -0.88
COL17A1-204ENST00000433822 TMPOP42166 694 aaKnown RBP9.53□□□□□ -0.88
COL17A1-204ENST00000433822 U2AF1Q01081 240 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL17A1-204ENST00000433822 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 PRDM9Q9NQV7 894 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 MINK1Q8N4C8 1332 aaPredicted RBP9.53□□□□□ -0.88
COL17A1-204ENST00000433822 LRP6O75581 1613 aa9.53□□□□□ -0.88
COL17A1-204ENST00000433822 SLIT1O75093 1534 aa9.52□□□□□ -0.88
COL17A1-204ENST00000433822 TOPAZ1Q8N9V7 1692 aa9.52□□□□□ -0.89
COL17A1-204ENST00000433822 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
COL17A1-204ENST00000433822 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms