RNA–Protein interactions for RNA: ENST00000433454.3

NEFM-202, Transcript of neurofilament medium, humanhuman

TSL 2 BASIC

Gene NEFM, Length 2,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-202ENST00000433454 RWDD1Q9H446 243 aaPredicted RBP13.36□□□□□ -0.27
NEFM-202ENST00000433454 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
NEFM-202ENST00000433454 HYPKQ9NX55 129 aa13.35□□□□□ -0.27
NEFM-202ENST00000433454 USP21Q9UK80 565 aa13.35□□□□□ -0.27
NEFM-202ENST00000433454 DOT1LQ8TEK3 1739 aa13.34□□□□□ -0.27
NEFM-202ENST00000433454 DDX21Q9NR30 783 aaKnown RBP eCLIP13.34□□□□□ -0.27
NEFM-202ENST00000433454 ANXA1P04083 346 aa13.34□□□□□ -0.27
NEFM-202ENST00000433454 BCL9O00512 1426 aa13.33□□□□□ -0.28
NEFM-202ENST00000433454 HDAC1Q13547 482 aaPredicted RBP13.33□□□□□ -0.28
NEFM-202ENST00000433454 FAM98CQ17RN3 349 aaKnown RBP13.33□□□□□ -0.28
NEFM-202ENST00000433454 PIGBQ92521 554 aa13.33□□□□□ -0.28
NEFM-202ENST00000433454 KAT6BQ8WYB5 2073 aa13.33□□□□□ -0.28
NEFM-202ENST00000433454 PROSER3Q2NL68 480 aa13.33□□□□□ -0.28
NEFM-202ENST00000433454 PTCD1O75127 700 aaKnown RBP13.32□□□□□ -0.28
NEFM-202ENST00000433454 PDIA6Q15084 440 aa13.32□□□□□ -0.28
NEFM-202ENST00000433454 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
NEFM-202ENST00000433454 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
NEFM-202ENST00000433454 DNAAF4Q8WXU2 420 aa13.31□□□□□ -0.28
NEFM-202ENST00000433454 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
NEFM-202ENST00000433454 PI4KAP2A4QPH2 592 aa13.31□□□□□ -0.28
NEFM-202ENST00000433454 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
NEFM-202ENST00000433454 PI4KAP1Q8N8J0 262 aa13.31□□□□□ -0.28
NEFM-202ENST00000433454 MARCH10Q8NA82 808 aaPredicted RBP13.31□□□□□ -0.28
NEFM-202ENST00000433454 SYTL4Q96C24 671 aaPredicted RBP13.31□□□□□ -0.28
NEFM-202ENST00000433454 MEIS3Q99687 375 aa13.31□□□□□ -0.28
NEFM-202ENST00000433454 AFF2P51816 1311 aa13.3□□□□□ -0.28
NEFM-202ENST00000433454 ADCY9O60503 1353 aa13.3□□□□□ -0.28
NEFM-202ENST00000433454 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
NEFM-202ENST00000433454 THSD7AQ9UPZ6 1657 aa13.3□□□□□ -0.28
NEFM-202ENST00000433454 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
NEFM-202ENST00000433454 MYL6BP14649 208 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 PRIM1P49642 420 aaKnown RBP13.29□□□□□ -0.28
NEFM-202ENST00000433454 KSR2Q6VAB6 950 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 VSIG10Q8N0Z9 540 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 SRCIN1Q9C0H9 1055 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 ATG3Q9NT62 314 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 A0A0G2JS52 829 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 MYT1Q01538 1121 aa13.29□□□□□ -0.28
NEFM-202ENST00000433454 GNAI3P08754 354 aa13.28□□□□□ -0.28
NEFM-202ENST00000433454 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
NEFM-202ENST00000433454 AIMP1Q12904 312 aaKnown RBP13.28□□□□□ -0.28
NEFM-202ENST00000433454 ATRNO75882 1429 aa13.27□□□□□ -0.28
NEFM-202ENST00000433454 BEND3Q5T5X7 828 aa13.27□□□□□ -0.29
NEFM-202ENST00000433454 LRP10Q7Z4F1 713 aa13.27□□□□□ -0.29
NEFM-202ENST00000433454 XAGE3Q8WTP9 111 aa13.27□□□□□ -0.29
NEFM-202ENST00000433454 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
NEFM-202ENST00000433454 TEX13AQ9BXU3 409 aaPredicted RBP13.27□□□□□ -0.29
NEFM-202ENST00000433454 SKAP1Q86WV1 359 aa13.27□□□□□ -0.29
NEFM-202ENST00000433454 SMC5Q8IY18 1101 aa13.27□□□□□ -0.29
NEFM-202ENST00000433454 TRPC5Q9UL62 973 aaPredicted RBP13.27□□□□□ -0.29
NEFM-202ENST00000433454 GNAI2P04899 355 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 COPS6Q7L5N1 327 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
NEFM-202ENST00000433454 RBM42Q9BTD8 480 aaKnown RBP13.26□□□□□ -0.29
NEFM-202ENST00000433454 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
NEFM-202ENST00000433454 CEP85Q6P2H3 762 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 RIC3Q7Z5B4 369 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 SIRT2Q8IXJ6 389 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 ANKRD44Q8N8A2 993 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 ACSBG1Q96GR2 724 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 TSHZ2Q9NRE2 1034 aa13.26□□□□□ -0.29
NEFM-202ENST00000433454 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
NEFM-202ENST00000433454 GCC1Q96CN9 775 aa13.25□□□□□ -0.29
NEFM-202ENST00000433454 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 ALDH1L1O75891 902 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 STARD3NLO95772 234 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
NEFM-202ENST00000433454 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 USP44Q9H0E7 712 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 PDZRN3Q9UPQ7 1066 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 A1BGP04217 495 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 RGS3P49796 1198 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 NEXNQ0ZGT2 675 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 DNAJC10Q8IXB1 793 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 LINS1Q8NG48 757 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
NEFM-202ENST00000433454 ANKRD13DQ6ZTN6 518 aa13.23□□□□□ -0.29
NEFM-202ENST00000433454 TJP1Q07157 1748 aa13.23□□□□□ -0.29
NEFM-202ENST00000433454 HMMRO75330 724 aa13.23□□□□□ -0.29
NEFM-202ENST00000433454 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
NEFM-202ENST00000433454 PLBD2Q8NHP8 589 aa13.22□□□□□ -0.29
NEFM-202ENST00000433454 METTL22Q9BUU2 404 aaPredicted RBP13.22□□□□□ -0.29
NEFM-202ENST00000433454 LRRFIP2Q9Y608 721 aaKnown RBP13.22□□□□□ -0.29
NEFM-202ENST00000433454 CWF19L2Q2TBE0 894 aaKnown RBP13.21□□□□□ -0.29
NEFM-202ENST00000433454 SLC4A9Q96Q91 983 aa13.21□□□□□ -0.29
NEFM-202ENST00000433454 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
NEFM-202ENST00000433454 NUP188Q5SRE5 1749 aa13.21□□□□□ -0.29
NEFM-202ENST00000433454 ONECUT3O60422 494 aaPredicted RBP13.21□□□□□ -0.29
NEFM-202ENST00000433454 NUCB1Q02818 461 aa13.21□□□□□ -0.29
NEFM-202ENST00000433454 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
NEFM-202ENST00000433454 C9orf78Q9NZ63 289 aaPredicted RBP13.21□□□□□ -0.29
NEFM-202ENST00000433454 PALLDQ8WX93 1383 aa13.21□□□□□ -0.29
NEFM-202ENST00000433454 NBPF7P0C2Y1 421 aaPredicted RBP13.2□□□□□ -0.3
NEFM-202ENST00000433454 QTRT2Q9H974 415 aaKnown RBP13.2□□□□□ -0.3
NEFM-202ENST00000433454 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
NEFM-202ENST00000433454 NHSQ6T4R5 1651 aa13.2□□□□□ -0.3
NEFM-202ENST00000433454 KCNQ2O43526 872 aa13.2□□□□□ -0.3
NEFM-202ENST00000433454 CYP19A1P11511 503 aaPredicted RBP13.2□□□□□ -0.3
NEFM-202ENST00000433454 MYD88Q99836 296 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms