RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 AMOTL1Q8IY63 956 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC146Q8IYE0 955 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 MINK1Q8N4C8 1332 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 SLC3A2P08195 630 aaKnown RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 TRIM27P14373 513 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 TAF7Q15545 349 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 B4GALNT3Q6L9W6 998 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ATG3Q9NT62 314 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 CHL1O00533 1208 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 TPM1P09493 284 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 G3BP1Q13283 466 aaKnown RBP eCLIP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 C9orf78Q9NZ63 289 aaPredicted RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 WAPLQ7Z5K2 1190 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 LINS1Q8NG48 757 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ZMYM6O95789 1325 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 NRXN3Q9Y4C0 1643 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 IQCEQ6IPM2 695 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 ZNF853P0CG23 659 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 NACAP1Q9BZK3 213 aa4.49□□□□□ -1.69
SHPRH-205ENST00000433355 LUC7LQ9NQ29 371 aaKnown RBP4.49□□□□□ -1.69
SHPRH-205ENST00000433355 FYB1O15117 783 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 FGD1P98174 961 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 DCAF5Q96JK2 942 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 K7ELQ4 463 aaPredicted RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 KCNA6P17658 529 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 BRMS1Q9HCU9 246 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 DACH1Q9UI36 760 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 NPHP4O75161 1426 aaPredicted RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 RNF41Q9H4P4 317 aaPredicted RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 ZSCAN16Q9H4T2 348 aaPredicted RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 GPR108Q9NPR9 543 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 MAP3K15Q6ZN16 1313 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 IFIT2P09913 472 aaKnown RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 FKBP5Q13451 457 aaPredicted RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 NCOR1O75376 2440 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 VSIG10Q8N0Z9 540 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 A6NNZ2 444 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 RAPGEF3O95398 923 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 TMC4Q7Z404 712 aa4.48□□□□□ -1.69
SHPRH-205ENST00000433355 LLPHQ9BRT6 129 aaKnown RBP4.48□□□□□ -1.69
SHPRH-205ENST00000433355 PPP1R2P41236 205 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CABP1Q9NZU7 370 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 SSH1Q8WYL5 1049 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 PHF8Q9UPP1 1060 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC192P0DO97 292 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 GNAT2P19087 354 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 EHBP1Q8NDI1 1231 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ZBTB40Q9NUA8 1239 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 DDX19AQ9NUU7 478 aaKnown RBP4.47□□□□□ -1.69
SHPRH-205ENST00000433355 IL17RAQ96F46 866 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 STK24Q9Y6E0 443 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ELP1O95163 1332 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ADAMTS13Q76LX8 1427 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 GPS2Q13227 327 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 TMTC2Q8N394 836 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ANKRD24Q8TF21 1146 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ALS2Q96Q42 1657 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 TRDNQ13061 729 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 SAFBQ15424 915 aaKnown RBP eCLIP4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC73Q6ZRK6 1079 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC112Q8NEF3 446 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 RGPD1P0DJD0 1748 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 LAMB4A4D0S4 1761 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 TATP17735 454 aaPredicted RBP4.47□□□□□ -1.69
SHPRH-205ENST00000433355 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.47□□□□□ -1.69
SHPRH-205ENST00000433355 ZNF652Q9Y2D9 606 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 KIF20AO95235 890 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 HDGFL1Q5TGJ6 251 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CCDC70Q6NSX1 233 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 CYP46A1Q9Y6A2 500 aa4.47□□□□□ -1.69
SHPRH-205ENST00000433355 TNS3Q68CZ2 1445 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 TUBB2AQ13885 445 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 CEP57L1Q8IYX8 460 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 EVI5LQ96CN4 794 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 TUBB2BQ9BVA1 445 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 ZNHIT6Q9NWK9 470 aaKnown RBP4.46□□□□□ -1.69
SHPRH-205ENST00000433355 TBC1D2BQ9UPU7 963 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 LTN1O94822 1766 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 hCG_1984214I3L0E3 225 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 CDK11BP21127 795 aaKnown RBP4.46□□□□□ -1.69
SHPRH-205ENST00000433355 NLRP6P59044 892 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 KRT85P78386 507 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 ORC2Q13416 577 aaPredicted RBP4.46□□□□□ -1.69
SHPRH-205ENST00000433355 ZNF713Q8N859 430 aaPredicted RBP4.46□□□□□ -1.69
SHPRH-205ENST00000433355 EXOC6Q8TAG9 804 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 ACBD3Q9H3P7 528 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 CAMTA1Q9Y6Y1 1673 aa4.46□□□□□ -1.69
SHPRH-205ENST00000433355 IPO7O95373 1038 aaKnown RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MAP4K4O95819 1239 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 GSDMDP57764 484 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 SLF2Q8IX21 1173 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 SMARCC1Q92922 1105 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 ARXQ96QS3 562 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 SRRTQ9BXP5 876 aaKnown RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 MCM3P25205 808 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 FLIIQ13045 1269 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 TTC22Q5TAA0 569 aa4.46□□□□□ -1.7
SHPRH-205ENST00000433355 ALDH8A1Q9H2A2 487 aaPredicted RBP4.46□□□□□ -1.7
SHPRH-205ENST00000433355 TSPYL4Q9UJ04 414 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms