RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 ZKSCAN5Q9Y2L8 839 aa18.23■□□□□ 0.51
LINC00839-202ENST00000429940 FAM208AQ9UK61 1670 aaKnown RBP18.23■□□□□ 0.51
LINC00839-202ENST00000429940 SRCIN1Q9C0H9 1055 aa18.22■□□□□ 0.51
LINC00839-202ENST00000429940 STAP2Q9UGK3 403 aa18.22■□□□□ 0.51
LINC00839-202ENST00000429940 CCDC30Q5VVM6 783 aa18.21■□□□□ 0.51
LINC00839-202ENST00000429940 RNF214Q8ND24 703 aa18.21■□□□□ 0.51
LINC00839-202ENST00000429940 CCDC39Q9UFE4 941 aa18.21■□□□□ 0.51
LINC00839-202ENST00000429940 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
LINC00839-202ENST00000429940 KDRP35968 1356 aa18.21■□□□□ 0.51
LINC00839-202ENST00000429940 SBNO1A3KN83 1393 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 FLT4P35916 1363 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 MCM5P33992 734 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 PSME1Q06323 249 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 NECTIN2Q92692 538 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
LINC00839-202ENST00000429940 UPF3BQ9BZI7 483 aaKnown RBP18.2■□□□□ 0.5
LINC00839-202ENST00000429940 PDCL3Q9H2J4 239 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 LRRFIP2Q9Y608 721 aaKnown RBP18.2■□□□□ 0.5
LINC00839-202ENST00000429940 UNC5CLQ8IV45 518 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 VSIG10Q8N0Z9 540 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 TSPY26PQ9H489 355 aa18.2■□□□□ 0.5
LINC00839-202ENST00000429940 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
LINC00839-202ENST00000429940 LRRC37A3O60309 1634 aa18.19■□□□□ 0.5
LINC00839-202ENST00000429940 EYA1Q99502 592 aa18.19■□□□□ 0.5
LINC00839-202ENST00000429940 C1orf167Q5SNV9 1468 aa18.19■□□□□ 0.5
LINC00839-202ENST00000429940 AOX1Q06278 1338 aa18.18■□□□□ 0.5
LINC00839-202ENST00000429940 IGSF1Q8N6C5 1336 aa18.18■□□□□ 0.5
LINC00839-202ENST00000429940 CSPP1Q1MSJ5 1256 aa18.18■□□□□ 0.5
LINC00839-202ENST00000429940 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
LINC00839-202ENST00000429940 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
LINC00839-202ENST00000429940 TTC21AQ8NDW8 1320 aa18.17■□□□□ 0.5
LINC00839-202ENST00000429940 HTATSF1O43719 755 aaKnown RBP18.17■□□□□ 0.5
LINC00839-202ENST00000429940 AMPHP49418 695 aa18.17■□□□□ 0.5
LINC00839-202ENST00000429940 N4BP2Q86UW6 1770 aaPredicted RBP18.17■□□□□ 0.5
LINC00839-202ENST00000429940 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 WDR33Q9C0J8 1336 aaKnown RBP18.16■□□□□ 0.5
LINC00839-202ENST00000429940 MST1RQ04912 1400 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 PHF14O94880 888 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 NLRP6P59044 892 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 CADPS2Q86UW7 1296 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 GDPD2Q9HCC8 539 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 IL1RAPL2Q9NP60 686 aa18.16■□□□□ 0.5
LINC00839-202ENST00000429940 GNAT3A8MTJ3 354 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 EPB41L2O43491 1005 aaKnown RBP18.15■□□□□ 0.5
LINC00839-202ENST00000429940 GADD45BO75293 160 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-202ENST00000429940 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-202ENST00000429940 HSPA4P34932 840 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 IL25Q9H293 177 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 PXDNLA1KZ92 1463 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 SOS1Q07889 1333 aaPredicted RBP18.15■□□□□ 0.5
LINC00839-202ENST00000429940 USP48Q86UV5 1035 aa18.15■□□□□ 0.5
LINC00839-202ENST00000429940 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
LINC00839-202ENST00000429940 NUTM1Q86Y26 1132 aa18.14■□□□□ 0.49
LINC00839-202ENST00000429940 PTMAP06454 111 aaKnown RBP18.14■□□□□ 0.49
LINC00839-202ENST00000429940 SSH3Q8TE77 659 aa18.13■□□□□ 0.49
LINC00839-202ENST00000429940 CACNA1FO60840 1977 aa18.13■□□□□ 0.49
LINC00839-202ENST00000429940 UQCRHLA0A096LP55 91 aa18.12■□□□□ 0.49
LINC00839-202ENST00000429940 MAP4K4O95819 1239 aaPredicted RBP18.12■□□□□ 0.49
LINC00839-202ENST00000429940 UQCRHP07919 91 aa18.12■□□□□ 0.49
LINC00839-202ENST00000429940 PIK3C2AO00443 1686 aa18.12■□□□□ 0.49
LINC00839-202ENST00000429940 KRT28Q7Z3Y7 464 aa18.12■□□□□ 0.49
LINC00839-202ENST00000429940 SLAIN2Q9P270 581 aa18.12■□□□□ 0.49
LINC00839-202ENST00000429940 RPAP1Q9BWH6 1393 aaPredicted RBP18.12■□□□□ 0.49
LINC00839-202ENST00000429940 RAB11FIP3O75154 756 aa18.11■□□□□ 0.49
LINC00839-202ENST00000429940 RAD50Q92878 1312 aa18.11■□□□□ 0.49
LINC00839-202ENST00000429940 SURF6O75683 361 aaKnown RBP18.11■□□□□ 0.49
LINC00839-202ENST00000429940 MAP3K5Q99683 1374 aa18.11■□□□□ 0.49
LINC00839-202ENST00000429940 TAF7Q15545 349 aaPredicted RBP18.1■□□□□ 0.49
LINC00839-202ENST00000429940 PPP1R42Q7Z4L9 355 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 FAM13BQ9NYF5 915 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 SGSM2O43147 1006 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 TMEM87AQ8NBN3 555 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 IL17REQ8NFR9 667 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 PI4K2BQ8TCG2 481 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 ZMYND15Q9H091 742 aa18.1■□□□□ 0.49
LINC00839-202ENST00000429940 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 FAM184AQ8NB25 1140 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 RHPN1Q8TCX5 695 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 SNX14Q9Y5W7 946 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 DCCP43146 1447 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 KIAA2012Q0VF49 1180 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 POLA2Q14181 598 aa18.09■□□□□ 0.49
LINC00839-202ENST00000429940 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
LINC00839-202ENST00000429940 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC00839-202ENST00000429940 CCDC183Q5T5S1 534 aa18.08■□□□□ 0.48
LINC00839-202ENST00000429940 SASS6Q6UVJ0 657 aa18.08■□□□□ 0.48
LINC00839-202ENST00000429940 BABAM1Q9NWV8 329 aa18.08■□□□□ 0.48
LINC00839-202ENST00000429940 CNPY2Q9Y2B0 182 aa18.08■□□□□ 0.48
LINC00839-202ENST00000429940 ZSCAN22P10073 491 aaPredicted RBP18.07■□□□□ 0.48
LINC00839-202ENST00000429940 AK2P54819 239 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 UVSSAQ2YD98 709 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 CNTROBQ8N137 903 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 TTC14Q96N46 770 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 SRGAP3O43295 1099 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 KIF1BPQ96EK5 621 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 MAP7D2Q96T17 732 aa18.07■□□□□ 0.48
LINC00839-202ENST00000429940 LSG1Q9H089 658 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms