RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 EIF5BO60841 1220 aaKnown RBP20.01■□□□□ 0.79
MBD4-203ENST00000429544 NBPF7P0C2Y1 421 aaPredicted RBP20.01■□□□□ 0.79
MBD4-203ENST00000429544 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 SSH3Q8TE77 659 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 CASC1Q6TDU7 716 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 PPP1R42Q7Z4L9 355 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 SLC52A2Q9HAB3 445 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
MBD4-203ENST00000429544 CPDO75976 1380 aa20■□□□□ 0.79
MBD4-203ENST00000429544 MAP3K2Q9Y2U5 619 aa20■□□□□ 0.79
MBD4-203ENST00000429544 IFNL2Q8IZJ0 200 aa19.99■□□□□ 0.79
MBD4-203ENST00000429544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.99■□□□□ 0.792e-6■■■□□ 15.3
MBD4-203ENST00000429544 MX1P20591 662 aa19.99■□□□□ 0.79
MBD4-203ENST00000429544 POLA2Q14181 598 aa19.99■□□□□ 0.79
MBD4-203ENST00000429544 ZNF790Q6PG37 636 aa19.99■□□□□ 0.79
MBD4-203ENST00000429544 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
MBD4-203ENST00000429544 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
MBD4-203ENST00000429544 NFATC2IPQ8NCF5 419 aa19.98■□□□□ 0.79
MBD4-203ENST00000429544 HYPKQ9NX55 129 aa19.98■□□□□ 0.79
MBD4-203ENST00000429544 SRGAP3O43295 1099 aa19.97■□□□□ 0.79
MBD4-203ENST00000429544 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
MBD4-203ENST00000429544 USP26Q9BXU7 913 aa19.97■□□□□ 0.79
MBD4-203ENST00000429544 SURF6O75683 361 aaKnown RBP19.97■□□□□ 0.79
MBD4-203ENST00000429544 CD2BP2O95400 341 aaKnown RBP19.97■□□□□ 0.79
MBD4-203ENST00000429544 ZNF335Q9H4Z2 1342 aaPredicted RBP19.97■□□□□ 0.79
MBD4-203ENST00000429544 IL1RAPL2Q9NP60 686 aa19.97■□□□□ 0.79
MBD4-203ENST00000429544 CYP27B1O15528 508 aa19.96■□□□□ 0.79
MBD4-203ENST00000429544 DDX21Q9NR30 783 aaKnown RBP eCLIP19.96■□□□□ 0.79
MBD4-203ENST00000429544 CHMP5Q9NZZ3 219 aa19.96■□□□□ 0.79
MBD4-203ENST00000429544 MRC1P22897 1456 aa19.95■□□□□ 0.78
MBD4-203ENST00000429544 AIMP1Q12904 312 aaKnown RBP19.95■□□□□ 0.78
MBD4-203ENST00000429544 RAB11FIP3O75154 756 aa19.95■□□□□ 0.78
MBD4-203ENST00000429544 ALDH1L1O75891 902 aa19.95■□□□□ 0.78
MBD4-203ENST00000429544 KDM4FA0A1W2PPD8 638 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 PDIA6Q15084 440 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 CWF19L2Q2TBE0 894 aaKnown RBP19.94■□□□□ 0.78
MBD4-203ENST00000429544 DCAF5Q96JK2 942 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 C9orf78Q9NZ63 289 aaPredicted RBP19.94■□□□□ 0.78
MBD4-203ENST00000429544 STAP2Q9UGK3 403 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 PLEKHG2Q9H7P9 1386 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 ERC2O15083 957 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 PRDM11Q9NQV5 511 aa19.94■□□□□ 0.78
MBD4-203ENST00000429544 DDX58O95786 925 aaKnown RBP19.93■□□□□ 0.78
MBD4-203ENST00000429544 SLAIN2Q9P270 581 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 PARP4Q9UKK3 1724 aaKnown RBP19.93■□□□□ 0.78
MBD4-203ENST00000429544 REC8O95072 547 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 GSE1Q14687 1217 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 NUTM1Q86Y26 1132 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 RHPN1Q8TCX5 695 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 ZNF496Q96IT1 587 aaPredicted RBP19.93■□□□□ 0.78
MBD4-203ENST00000429544 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
MBD4-203ENST00000429544 TRIM6-TRIM34B2RNG4 842 aa19.92■□□□□ 0.78
MBD4-203ENST00000429544 K7ELQ4 463 aaPredicted RBP19.92■□□□□ 0.78
MBD4-203ENST00000429544 SOS2Q07890 1332 aaPredicted RBP19.92■□□□□ 0.78
MBD4-203ENST00000429544 MYL6BP14649 208 aa19.92■□□□□ 0.78
MBD4-203ENST00000429544 RILPL2Q969X0 211 aa19.92■□□□□ 0.78
MBD4-203ENST00000429544 AK9Q5TCS8 1911 aa19.91■□□□□ 0.78
MBD4-203ENST00000429544 RABEP1Q15276 862 aa19.91■□□□□ 0.78
MBD4-203ENST00000429544 TTC5Q8N0Z6 440 aa19.91■□□□□ 0.78
MBD4-203ENST00000429544 AOX1Q06278 1338 aa19.91■□□□□ 0.78
MBD4-203ENST00000429544 KIF1BPQ96EK5 621 aa19.91■□□□□ 0.78
MBD4-203ENST00000429544 LINS1Q8NG48 757 aa19.9■□□□□ 0.78
MBD4-203ENST00000429544 WDR17Q8IZU2 1322 aa19.9■□□□□ 0.78
MBD4-203ENST00000429544 DDIT3P35638 169 aa19.9■□□□□ 0.78
MBD4-203ENST00000429544 CABP4P57796 275 aa19.89■□□□□ 0.77
MBD4-203ENST00000429544 MTX1Q13505 466 aa19.89■□□□□ 0.77
MBD4-203ENST00000429544 TOM1L2Q6ZVM7 507 aa19.89■□□□□ 0.77
MBD4-203ENST00000429544 RIC3Q7Z5B4 369 aa19.89■□□□□ 0.77
MBD4-203ENST00000429544 FOXD4L1Q9NU39 408 aa19.89■□□□□ 0.77
MBD4-203ENST00000429544 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
MBD4-203ENST00000429544 OS9Q13438 667 aaPredicted RBP19.88■□□□□ 0.77
MBD4-203ENST00000429544 UNC5CLQ8IV45 518 aa19.88■□□□□ 0.77
MBD4-203ENST00000429544 XAGE3Q8WTP9 111 aa19.88■□□□□ 0.77
MBD4-203ENST00000429544 ESYT1Q9BSJ8 1104 aa19.88■□□□□ 0.77
MBD4-203ENST00000429544 COL5A2P05997 1499 aaPredicted RBP19.88■□□□□ 0.77
MBD4-203ENST00000429544 HSP90AB4PQ58FF6 505 aa19.88■□□□□ 0.77
MBD4-203ENST00000429544 GRM8O00222 908 aa19.87■□□□□ 0.77
MBD4-203ENST00000429544 SNRPA1P09661 255 aaKnown RBP19.87■□□□□ 0.77
MBD4-203ENST00000429544 FMNL2Q96PY5 1086 aa19.87■□□□□ 0.77
MBD4-203ENST00000429544 CHMLP26374 656 aa19.87■□□□□ 0.77
MBD4-203ENST00000429544 USP16Q9Y5T5 823 aa19.87■□□□□ 0.77
MBD4-203ENST00000429544 LAMB4A4D0S4 1761 aa19.87■□□□□ 0.77
MBD4-203ENST00000429544 PIP4K2AP48426 406 aaPredicted RBP19.86■□□□□ 0.77
MBD4-203ENST00000429544 SUCLG2Q96I99 432 aa19.86■□□□□ 0.77
MBD4-203ENST00000429544 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
MBD4-203ENST00000429544 GLI3P10071 1580 aa19.86■□□□□ 0.77
MBD4-203ENST00000429544 LARP1Q6PKG0 1096 aaKnown RBP19.86■□□□□ 0.77
MBD4-203ENST00000429544 COPS6Q7L5N1 327 aa19.86■□□□□ 0.77
MBD4-203ENST00000429544 IGKV5-2P06315 115 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 PA2G4Q9UQ80 394 aaKnown RBP19.85■□□□□ 0.77
MBD4-203ENST00000429544 MAP4K4O95819 1239 aaPredicted RBP19.85■□□□□ 0.77
MBD4-203ENST00000429544 MCM4P33991 863 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 ZCRB1Q8TBF4 217 aaKnown RBP19.85■□□□□ 0.77
MBD4-203ENST00000429544 PI4K2BQ8TCG2 481 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 UTYO14607 1347 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 PCDH11XQ9BZA7 1347 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 PCDH11YQ9BZA8 1340 aa19.85■□□□□ 0.77
MBD4-203ENST00000429544 CIZ1Q9ULV3 898 aaPredicted RBP19.84■□□□□ 0.77
MBD4-203ENST00000429544 AFDNP55196 1824 aaKnown RBP19.84■□□□□ 0.77
MBD4-203ENST00000429544 NEXNQ0ZGT2 675 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms