RNA–Protein interactions for RNA: ENST00000428969.1

PCCA-206, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-206ENST00000428969 DNAJC10Q8IXB1 793 aa17.68■□□□□ 0.42
PCCA-206ENST00000428969 JMYQ8N9B5 988 aa17.68■□□□□ 0.42
PCCA-206ENST00000428969 NRXN2Q9P2S2 1712 aa17.68■□□□□ 0.42
PCCA-206ENST00000428969 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
PCCA-206ENST00000428969 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
PCCA-206ENST00000428969 SMC1BQ8NDV3 1235 aa17.67■□□□□ 0.42
PCCA-206ENST00000428969 COL15A1P39059 1388 aa17.66■□□□□ 0.42
PCCA-206ENST00000428969 DLEC1Q9Y238 1755 aa17.66■□□□□ 0.42
PCCA-206ENST00000428969 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
PCCA-206ENST00000428969 RRAGCQ9HB90 399 aa17.66■□□□□ 0.42
PCCA-206ENST00000428969 RNMTO43148 476 aaKnown RBP17.65■□□□□ 0.42
PCCA-206ENST00000428969 NFIXQ14938 502 aa17.65■□□□□ 0.42
PCCA-206ENST00000428969 VIRMAQ69YN4 1812 aaKnown RBP17.64■□□□□ 0.41
PCCA-206ENST00000428969 LMNB1P20700 586 aa17.64■□□□□ 0.41
PCCA-206ENST00000428969 LGR6Q9HBX8 967 aa17.64■□□□□ 0.41
PCCA-206ENST00000428969 PCNTO95613 3336 aa17.64■□□□□ 0.41
PCCA-206ENST00000428969 AMER1Q5JTC6 1135 aaPredicted RBP17.63■□□□□ 0.41
PCCA-206ENST00000428969 TTLL6Q8N841 843 aa17.63■□□□□ 0.41
PCCA-206ENST00000428969 ZBTB1Q9Y2K1 713 aa17.63■□□□□ 0.41
PCCA-206ENST00000428969 SERPINB2P05120 415 aa17.62■□□□□ 0.41
PCCA-206ENST00000428969 SLC39A6Q13433 755 aa17.62■□□□□ 0.41
PCCA-206ENST00000428969 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 GLTPD2A6NH11 291 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 VEGFAP15692 232 aaPredicted RBP17.61■□□□□ 0.41
PCCA-206ENST00000428969 HTRA3P83110 453 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 RASSF7Q02833 373 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 BCL2L12Q9HB09 334 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 PDZRN3Q9UPQ7 1066 aa17.61■□□□□ 0.41
PCCA-206ENST00000428969 A0A087WZG4 1122 aa17.6■□□□□ 0.41
PCCA-206ENST00000428969 H0YIN7 160 aa17.6■□□□□ 0.41
PCCA-206ENST00000428969 STARD3NLO95772 234 aa17.6■□□□□ 0.41
PCCA-206ENST00000428969 HMOX1P09601 288 aa17.59■□□□□ 0.41
PCCA-206ENST00000428969 MTHFSDQ2M296 383 aaKnown RBP17.59■□□□□ 0.41
PCCA-206ENST00000428969 C2CD5Q86YS7 1000 aa17.59■□□□□ 0.41
PCCA-206ENST00000428969 PCGF6Q9BYE7 350 aa17.59■□□□□ 0.41
PCCA-206ENST00000428969 TIAM2Q8IVF5 1701 aa17.58■□□□□ 0.41
PCCA-206ENST00000428969 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
PCCA-206ENST00000428969 TTC5Q8N0Z6 440 aa17.58■□□□□ 0.4
PCCA-206ENST00000428969 DIAPH1O60610 1272 aaKnown RBP17.57■□□□□ 0.4
PCCA-206ENST00000428969 CCDC88AQ3V6T2 1871 aa17.56■□□□□ 0.4
PCCA-206ENST00000428969 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
PCCA-206ENST00000428969 NFKBIEO00221 500 aa17.56■□□□□ 0.4
PCCA-206ENST00000428969 CANXP27824 592 aaKnown RBP17.56■□□□□ 0.4
PCCA-206ENST00000428969 PRELPP51888 382 aa17.56■□□□□ 0.4
PCCA-206ENST00000428969 COL13A1Q5TAT6 717 aaPredicted RBP17.56■□□□□ 0.4
PCCA-206ENST00000428969 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
PCCA-206ENST00000428969 PDE6BP35913 854 aa17.55■□□□□ 0.4
PCCA-206ENST00000428969 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
PCCA-206ENST00000428969 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
PCCA-206ENST00000428969 SCN7AQ01118 1682 aa17.55■□□□□ 0.4
PCCA-206ENST00000428969 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
PCCA-206ENST00000428969 ANKRD31Q8N7Z5 1873 aa17.53■□□□□ 0.4
PCCA-206ENST00000428969 TEFQ10587 303 aa17.53■□□□□ 0.4
PCCA-206ENST00000428969 ZNF790Q6PG37 636 aa17.53■□□□□ 0.4
PCCA-206ENST00000428969 BICDL1Q6ZP65 573 aa17.53■□□□□ 0.4
PCCA-206ENST00000428969 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
PCCA-206ENST00000428969 FER1L6Q2WGJ9 1857 aa17.52■□□□□ 0.4
PCCA-206ENST00000428969 LTBP3Q9NS15 1303 aa17.52■□□□□ 0.4
PCCA-206ENST00000428969 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
PCCA-206ENST00000428969 TBC1D9BQ66K14 1250 aa17.52■□□□□ 0.4
PCCA-206ENST00000428969 GAS2L2Q8NHY3 880 aa17.52■□□□□ 0.4
PCCA-206ENST00000428969 KIF7Q2M1P5 1343 aa17.51■□□□□ 0.39
PCCA-206ENST00000428969 GNAT3A8MTJ3 354 aa17.51■□□□□ 0.39
PCCA-206ENST00000428969 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
PCCA-206ENST00000428969 PRR5LQ6MZQ0 368 aa17.51■□□□□ 0.39
PCCA-206ENST00000428969 TNS4Q8IZW8 715 aa17.51■□□□□ 0.39
PCCA-206ENST00000428969 ZNF622Q969S3 477 aaKnown RBP eCLIP17.51■□□□□ 0.39
PCCA-206ENST00000428969 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
PCCA-206ENST00000428969 SIPA1L3O60292 1781 aaPredicted RBP17.51■□□□□ 0.39
PCCA-206ENST00000428969 POTECB2RU33 542 aa17.5■□□□□ 0.39
PCCA-206ENST00000428969 ERFEQ4G0M1 354 aa17.5■□□□□ 0.39
PCCA-206ENST00000428969 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
PCCA-206ENST00000428969 NPM2Q86SE8 214 aaKnown RBP17.5■□□□□ 0.39
PCCA-206ENST00000428969 NPC1L1Q9UHC9 1359 aa17.5■□□□□ 0.39
PCCA-206ENST00000428969 COL11A2P13942 1736 aaPredicted RBP17.5■□□□□ 0.39
PCCA-206ENST00000428969 C21orf2O43822 256 aa17.49■□□□□ 0.39
PCCA-206ENST00000428969 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
PCCA-206ENST00000428969 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
PCCA-206ENST00000428969 FMNL2Q96PY5 1086 aa17.49■□□□□ 0.39
PCCA-206ENST00000428969 SETDB2Q96T68 719 aa17.49■□□□□ 0.39
PCCA-206ENST00000428969 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
PCCA-206ENST00000428969 HSPA1AP0DMV8 641 aaKnown RBP17.48■□□□□ 0.39
PCCA-206ENST00000428969 HSPA1BP0DMV9 641 aaKnown RBP17.48■□□□□ 0.39
PCCA-206ENST00000428969 CC2D1BQ5T0F9 858 aaKnown RBP17.48■□□□□ 0.39
PCCA-206ENST00000428969 STYK1Q6J9G0 422 aa17.48■□□□□ 0.39
PCCA-206ENST00000428969 CNBD1Q8NA66 436 aa17.48■□□□□ 0.39
PCCA-206ENST00000428969 TAOK3Q9H2K8 898 aa17.48■□□□□ 0.39
PCCA-206ENST00000428969 TBC1D2BQ9UPU7 963 aa17.48■□□□□ 0.39
PCCA-206ENST00000428969 CEMIPQ8WUJ3 1361 aa17.48■□□□□ 0.39
PCCA-206ENST00000428969 ST5P78524 1137 aa17.47■□□□□ 0.39
PCCA-206ENST00000428969 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
PCCA-206ENST00000428969 ARFGEF2Q9Y6D5 1785 aa17.46■□□□□ 0.39
PCCA-206ENST00000428969 U2SURPO15042 1029 aaKnown RBP17.46■□□□□ 0.39
PCCA-206ENST00000428969 NPHP1O15259 732 aa17.46■□□□□ 0.39
PCCA-206ENST00000428969 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
PCCA-206ENST00000428969 SRGNP10124 158 aa17.46■□□□□ 0.39
PCCA-206ENST00000428969 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
PCCA-206ENST00000428969 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
PCCA-206ENST00000428969 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
PCCA-206ENST00000428969 CCER1Q8TC90 406 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms