RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 HAND2P61296 217 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 FILIP1LQ4L180 1135 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 TNMDQ9H2S6 317 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 TSPY26PQ9H489 355 aa11.47□□□□□ -0.57
SNX13-203ENST00000428135 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
SNX13-203ENST00000428135 CAMK4Q16566 473 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 LDHAL6AQ6ZMR3 332 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 ZCRB1Q8TBF4 217 aaKnown RBP11.46□□□□□ -0.57
SNX13-203ENST00000428135 SCLT1Q96NL6 688 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 AKAP2Q9Y2D5 859 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 PI4KAP2A4QPH2 592 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 GOLIM4O00461 696 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 SLC5A1P13866 664 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 ANKRD1Q15327 319 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 PI4KAP1Q8N8J0 262 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 RUFY1Q96T51 708 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 CTNNA3Q9UI47 895 aa11.46□□□□□ -0.57
SNX13-203ENST00000428135 CCT2P78371 535 aaKnown RBP11.46□□□□□ -0.57
SNX13-203ENST00000428135 RARSP54136 660 aaKnown RBP11.46□□□□□ -0.58
SNX13-203ENST00000428135 SLAIN2Q9P270 581 aa11.46□□□□□ -0.58
SNX13-203ENST00000428135 ATP10AO60312 1499 aa11.46□□□□□ -0.58
SNX13-203ENST00000428135 PPIP5K1Q6PFW1 1433 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 FLIIQ13045 1269 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 NOL7Q9UMY1 257 aaKnown RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 SPATA32Q96LK8 384 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 DISP3Q9P2K9 1392 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 TTC21BQ7Z4L5 1316 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 LTKP29376 864 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 NBPF6Q5VWK0 638 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 NBPF5PQ86XG9 351 aaPredicted RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 RPAP2Q8IXW5 612 aaPredicted RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 NBPF4Q96M43 638 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 DBF4Q9UBU7 674 aaPredicted RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 GPS2Q13227 327 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 DDX46Q7L014 1031 aaKnown RBP11.45□□□□□ -0.58
SNX13-203ENST00000428135 AEBP1Q8IUX7 1158 aa11.45□□□□□ -0.58
SNX13-203ENST00000428135 MCM2P49736 904 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 FAM182BQ5T319 152 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 UBA5Q9GZZ9 404 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 SEC63Q9UGP8 760 aaKnown RBP11.44□□□□□ -0.58
SNX13-203ENST00000428135 USP21Q9UK80 565 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 JAG2Q9Y219 1238 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 MAP3K12Q12852 859 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 DEF6Q9H4E7 631 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 DUOX2Q9NRD8 1548 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 HYPKQ9NX55 129 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 CHPF2Q9P2E5 772 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 ZNF771Q7L3S4 317 aaPredicted RBP11.44□□□□□ -0.58
SNX13-203ENST00000428135 JMYQ8N9B5 988 aa11.44□□□□□ -0.58
SNX13-203ENST00000428135 KRT85P78386 507 aa11.43□□□□□ -0.58
SNX13-203ENST00000428135 HSP90AA2PQ14568 343 aaPredicted RBP11.43□□□□□ -0.58
SNX13-203ENST00000428135 CT47B1P0C2W7 299 aaPredicted RBP11.43□□□□□ -0.58
SNX13-203ENST00000428135 GCP02774 474 aa11.43□□□□□ -0.58
SNX13-203ENST00000428135 RBM26Q5T8P6 1007 aaKnown RBP11.43□□□□□ -0.58
SNX13-203ENST00000428135 FEZ1Q99689 392 aa11.43□□□□□ -0.58
SNX13-203ENST00000428135 CWC25Q9NXE8 425 aaPredicted RBP11.43□□□□□ -0.58
SNX13-203ENST00000428135 GLRX3O76003 335 aaKnown RBP11.42□□□□□ -0.58
SNX13-203ENST00000428135 CDKL5O76039 1030 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 NOM1Q5C9Z4 860 aaKnown RBP11.42□□□□□ -0.58
SNX13-203ENST00000428135 ZNF213O14771 459 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 TRIM27P14373 513 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 KLHL10Q6JEL2 608 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 SMARCE1Q969G3 411 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 CHD1O14646 1710 aa11.42□□□□□ -0.58
SNX13-203ENST00000428135 WDR33Q9C0J8 1336 aaKnown RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 ENOX2Q16206 610 aaKnown RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 HSP90AB3PQ58FF7 597 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 CLEC11AQ9Y240 323 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 SSR1P43307 286 aaKnown RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 STIM1Q13586 685 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 IFIT3O14879 490 aaKnown RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 FAM43AQ8N2R8 423 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 XAGE3Q8WTP9 111 aa11.41□□□□□ -0.58
SNX13-203ENST00000428135 ZNF335Q9H4Z2 1342 aaPredicted RBP11.41□□□□□ -0.58
SNX13-203ENST00000428135 PICALMQ13492 652 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 CEP57L1Q8IYX8 460 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 IL2RBP14784 551 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 ST5P78524 1137 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 COPS6Q7L5N1 327 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 PPP1R42Q7Z4L9 355 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 BMP2KQ9NSY1 1161 aaPredicted RBP11.4□□□□□ -0.58
SNX13-203ENST00000428135 SNRPA1P09661 255 aaKnown RBP11.4□□□□□ -0.58
SNX13-203ENST00000428135 PPFIBP1Q86W92 1011 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 SETDB2Q96T68 719 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 BACH2Q9BYV9 841 aa11.4□□□□□ -0.58
SNX13-203ENST00000428135 RIMBP2O15034 1052 aa11.4□□□□□ -0.59
SNX13-203ENST00000428135 NFATC2IPQ8NCF5 419 aa11.4□□□□□ -0.59
SNX13-203ENST00000428135 SLC12A7Q9Y666 1083 aa11.4□□□□□ -0.59
SNX13-203ENST00000428135 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 MBD3O95983 291 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 HELBQ8NG08 1087 aaPredicted RBP11.39□□□□□ -0.59
SNX13-203ENST00000428135 ZNHIT6Q9NWK9 470 aaKnown RBP11.39□□□□□ -0.59
SNX13-203ENST00000428135 NIP7Q9Y221 180 aaKnown RBP eCLIP11.39□□□□□ -0.59
SNX13-203ENST00000428135 ANKRD13DQ6ZTN6 518 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
SNX13-203ENST00000428135 PANK2Q9BZ23 570 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms