RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 PARP3Q9Y6F1 533 aa13.61□□□□□ -0.23
GACAT3-201ENST00000426539 KCPQ6ZWJ8 1503 aa13.6□□□□□ -0.23
GACAT3-201ENST00000426539 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
GACAT3-201ENST00000426539 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
GACAT3-201ENST00000426539 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
GACAT3-201ENST00000426539 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
GACAT3-201ENST00000426539 GPBP1L1Q9HC44 474 aaPredicted RBP13.6□□□□□ -0.23
GACAT3-201ENST00000426539 BCS1LQ9Y276 419 aa13.6□□□□□ -0.23
GACAT3-201ENST00000426539 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
GACAT3-201ENST00000426539 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.23
GACAT3-201ENST00000426539 POLRMTO00411 1230 aaKnown RBP13.58□□□□□ -0.24
GACAT3-201ENST00000426539 TM4SF1P30408 202 aa13.58□□□□□ -0.24
GACAT3-201ENST00000426539 ABCB7O75027 752 aa13.57□□□□□ -0.24
GACAT3-201ENST00000426539 POLA2Q14181 598 aa13.57□□□□□ -0.24
GACAT3-201ENST00000426539 USPL1Q5W0Q7 1092 aa13.57□□□□□ -0.24
GACAT3-201ENST00000426539 IL17REQ8NFR9 667 aa13.57□□□□□ -0.24
GACAT3-201ENST00000426539 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
GACAT3-201ENST00000426539 KIF3CO14782 793 aa13.56□□□□□ -0.24
GACAT3-201ENST00000426539 U2SURPO15042 1029 aaKnown RBP13.56□□□□□ -0.24
GACAT3-201ENST00000426539 FCHSD2O94868 740 aa13.56□□□□□ -0.24
GACAT3-201ENST00000426539 VSIG10Q8N0Z9 540 aa13.56□□□□□ -0.24
GACAT3-201ENST00000426539 BCL2L12Q9HB09 334 aa13.56□□□□□ -0.24
GACAT3-201ENST00000426539 CHRNA5P30532 468 aa13.55□□□□□ -0.24
GACAT3-201ENST00000426539 NFIXQ14938 502 aa13.55□□□□□ -0.24
GACAT3-201ENST00000426539 ARHGAP27Q6ZUM4 889 aa13.55□□□□□ -0.24
GACAT3-201ENST00000426539 NARFQ9UHQ1 456 aa13.55□□□□□ -0.24
GACAT3-201ENST00000426539 COL15A1P39059 1388 aa13.55□□□□□ -0.24
GACAT3-201ENST00000426539 ZPR1O75312 459 aa13.54□□□□□ -0.24
GACAT3-201ENST00000426539 ZNF496Q96IT1 587 aaPredicted RBP13.54□□□□□ -0.24
GACAT3-201ENST00000426539 PHACTR3Q96KR7 559 aa13.54□□□□□ -0.24
GACAT3-201ENST00000426539 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
GACAT3-201ENST00000426539 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
GACAT3-201ENST00000426539 GNAT3A8MTJ3 354 aa13.53□□□□□ -0.24
GACAT3-201ENST00000426539 GAS2L2Q8NHY3 880 aa13.53□□□□□ -0.24
GACAT3-201ENST00000426539 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
GACAT3-201ENST00000426539 UBR2Q8IWV8 1755 aa13.53□□□□□ -0.24
GACAT3-201ENST00000426539 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.25
GACAT3-201ENST00000426539 EIF5P55010 431 aaKnown RBP13.52□□□□□ -0.25
GACAT3-201ENST00000426539 ZNF790Q6PG37 636 aa13.52□□□□□ -0.25
GACAT3-201ENST00000426539 CEMIPQ8WUJ3 1361 aa13.52□□□□□ -0.25
GACAT3-201ENST00000426539 HEG1Q9ULI3 1381 aa13.51□□□□□ -0.25
GACAT3-201ENST00000426539 KCNQ3O43525 872 aa13.51□□□□□ -0.25
GACAT3-201ENST00000426539 PRKAR2BP31323 418 aa13.51□□□□□ -0.25
GACAT3-201ENST00000426539 DALRD3Q5D0E6 543 aaKnown RBP13.51□□□□□ -0.25
GACAT3-201ENST00000426539 C9orf131Q5VYM1 1079 aa13.51□□□□□ -0.25
GACAT3-201ENST00000426539 TTC5Q8N0Z6 440 aa13.51□□□□□ -0.25
GACAT3-201ENST00000426539 VIRMAQ69YN4 1812 aaKnown RBP13.5□□□□□ -0.25
GACAT3-201ENST00000426539 SERPINB2P05120 415 aa13.5□□□□□ -0.25
GACAT3-201ENST00000426539 HSPA6P17066 643 aa13.5□□□□□ -0.25
GACAT3-201ENST00000426539 PPP2R1AP30153 589 aa13.5□□□□□ -0.25
GACAT3-201ENST00000426539 TEFQ10587 303 aa13.5□□□□□ -0.25
GACAT3-201ENST00000426539 CARMIL3Q8ND23 1372 aa13.49□□□□□ -0.25
GACAT3-201ENST00000426539 STARD3NLO95772 234 aa13.49□□□□□ -0.25
GACAT3-201ENST00000426539 NMRK2Q9NPI5 230 aa13.49□□□□□ -0.25
GACAT3-201ENST00000426539 NRXN2Q9P2S2 1712 aa13.48□□□□□ -0.25
GACAT3-201ENST00000426539 CFAP53Q96M91 514 aa13.48□□□□□ -0.25
GACAT3-201ENST00000426539 ARFGEF1Q9Y6D6 1849 aa13.48□□□□□ -0.25
GACAT3-201ENST00000426539 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
GACAT3-201ENST00000426539 A1BGP04217 495 aa13.47□□□□□ -0.25
GACAT3-201ENST00000426539 TBC1D9BQ66K14 1250 aa13.47□□□□□ -0.25
GACAT3-201ENST00000426539 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
GACAT3-201ENST00000426539 FMNL2Q96PY5 1086 aa13.47□□□□□ -0.25
GACAT3-201ENST00000426539 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
GACAT3-201ENST00000426539 ZBTB12Q9Y330 459 aaPredicted RBP13.47□□□□□ -0.25
GACAT3-201ENST00000426539 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
GACAT3-201ENST00000426539 A0A087WZG4 1122 aa13.46□□□□□ -0.25
GACAT3-201ENST00000426539 PRAMEF22A3QJZ6 481 aa13.46□□□□□ -0.25
GACAT3-201ENST00000426539 BTBD11A6QL63 1104 aa13.46□□□□□ -0.25
GACAT3-201ENST00000426539 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.25
GACAT3-201ENST00000426539 IL6STP40189 918 aaPredicted RBP13.46□□□□□ -0.25
GACAT3-201ENST00000426539 PRELPP51888 382 aa13.46□□□□□ -0.25
GACAT3-201ENST00000426539 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.25
GACAT3-201ENST00000426539 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
GACAT3-201ENST00000426539 RNF181Q9P0P0 153 aa13.46□□□□□ -0.25
GACAT3-201ENST00000426539 TOMM70O94826 608 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 RASSF7Q02833 373 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 MCM10Q7L590 875 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 USP16Q9Y5T5 823 aa13.45□□□□□ -0.26
GACAT3-201ENST00000426539 CAMTA2O94983 1202 aa13.44□□□□□ -0.26
GACAT3-201ENST00000426539 PIP4K2AP48426 406 aaPredicted RBP13.44□□□□□ -0.26
GACAT3-201ENST00000426539 DCTN1Q14203 1278 aa13.44□□□□□ -0.26
GACAT3-201ENST00000426539 CCDC24Q8N4L8 307 aa13.44□□□□□ -0.26
GACAT3-201ENST00000426539 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
GACAT3-201ENST00000426539 PRR5LQ6MZQ0 368 aa13.43□□□□□ -0.26
GACAT3-201ENST00000426539 TTLL6Q8N841 843 aa13.43□□□□□ -0.26
GACAT3-201ENST00000426539 SCN7AQ01118 1682 aa13.43□□□□□ -0.26
GACAT3-201ENST00000426539 CEP350Q5VT06 3117 aa13.42□□□□□ -0.26
GACAT3-201ENST00000426539 H0YIN7 160 aa13.42□□□□□ -0.26
GACAT3-201ENST00000426539 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
GACAT3-201ENST00000426539 DLEC1Q9Y238 1755 aa13.41□□□□□ -0.26
GACAT3-201ENST00000426539 NFKBIEO00221 500 aa13.41□□□□□ -0.26
GACAT3-201ENST00000426539 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
GACAT3-201ENST00000426539 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
GACAT3-201ENST00000426539 HTATSF1O43719 755 aaKnown RBP13.4□□□□□ -0.26
GACAT3-201ENST00000426539 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
GACAT3-201ENST00000426539 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
GACAT3-201ENST00000426539 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
GACAT3-201ENST00000426539 RBM46Q8TBY0 533 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms