RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 BMP2KQ9NSY1 1161 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-207ENST00000426142 CCDC144CPQ8IYA2 1237 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 ZNF213O14771 459 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 CDR1P51861 262 aa9.29□□□□□ -0.92
CTNND1-207ENST00000426142 CWC25Q9NXE8 425 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-207ENST00000426142 CCT2P78371 535 aaKnown RBP9.28□□□□□ -0.92
CTNND1-207ENST00000426142 SLC39A6Q13433 755 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 LDHAL6AQ6ZMR3 332 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 ZNF444Q8N0Y2 327 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-207ENST00000426142 CABLES1Q8TDN4 633 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 ZRANB1Q9UGI0 708 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 TTLL12Q14166 644 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-207ENST00000426142 GPATCH8Q9UKJ3 1502 aaKnown RBP9.28□□□□□ -0.92
CTNND1-207ENST00000426142 RPRD2Q5VT52 1461 aaKnown RBP9.28□□□□□ -0.92
CTNND1-207ENST00000426142 RAB11FIP4Q86YS3 637 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 ZNF287Q9HBT7 754 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 ZNF622Q969S3 477 aaKnown RBP eCLIP9.28□□□□□ -0.923e-7■□□□□ 10.1
CTNND1-207ENST00000426142 PTPRCP08575 1304 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 RAPGEF6Q8TEU7 1601 aa9.28□□□□□ -0.92
CTNND1-207ENST00000426142 RFC4P35249 363 aa9.27□□□□□ -0.92
CTNND1-207ENST00000426142 ASXL2Q76L83 1435 aa9.27□□□□□ -0.92
CTNND1-207ENST00000426142 HAND2P61296 217 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 CADPS2Q86UW7 1296 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 SLC12A7Q9Y666 1083 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 SYCE3A1L190 88 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 WDR78Q5VTH9 848 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 PPP1R42Q7Z4L9 355 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 GRPEL1Q9HAV7 217 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 CHPF2Q9P2E5 772 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 PPIP5K1Q6PFW1 1433 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 CCP110O43303 1012 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 FILIP1Q7Z7B0 1213 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 MSH6P52701 1360 aa9.27□□□□□ -0.93
CTNND1-207ENST00000426142 IFIT3O14879 490 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 RDXP35241 583 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 CTCFLQ8NI51 663 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 SYCP2Q9BX26 1530 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 TRMT1LQ7Z2T5 733 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 LRRC59Q96AG4 307 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 CEP131Q9UPN4 1083 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 GOLGA8BA8MQT2 603 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 MYCNP04198 464 aaPredicted RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 MCM4P33991 863 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 DDX46Q7L014 1031 aaKnown RBP9.26□□□□□ -0.93
CTNND1-207ENST00000426142 C8orf76Q96K31 380 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 C8orf37Q96NL8 207 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 GRM1Q13255 1194 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 CCDC181Q5TID7 509 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 KLHL10Q6JEL2 608 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 MYO6Q9UM54 1294 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 NSD2O96028 1365 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 BIVM-ERCC5R4GMW8 1640 aa9.26□□□□□ -0.93
CTNND1-207ENST00000426142 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 CBFA2T2O43439 604 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 IQCA1Q86XH1 822 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 DMRT2Q9Y5R5 561 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 UBAP1LF5GYI3 381 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 UBA5Q9GZZ9 404 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 VAT1LQ9HCJ6 419 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 PIK3R4Q99570 1358 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 EIF5P55010 431 aaKnown RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ZCRB1Q8TBF4 217 aaKnown RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 WWC3Q9ULE0 1092 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 IQSEC3Q9UPP2 1182 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ANKRD36BQ8N2N9 1353 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ATP10BO94823 1461 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 NBPF6Q5VWK0 638 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ANKRD13DQ6ZTN6 518 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 NBPF5PQ86XG9 351 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 EVI5LQ96CN4 794 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 NBPF4Q96M43 638 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 RBM10P98175 930 aaKnown RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 SSRP1Q08945 709 aaKnown RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 MAP3K11Q16584 847 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 SCLT1Q96NL6 688 aa9.25□□□□□ -0.93
CTNND1-207ENST00000426142 CDC5LQ99459 802 aaKnown RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 TEX13AQ9BXU3 409 aaPredicted RBP9.25□□□□□ -0.93
CTNND1-207ENST00000426142 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 IGHDP01880 384 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 XAGE3Q8WTP9 111 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 ERCC4Q92889 916 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-207ENST00000426142 NLRP5P59047 1200 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 CFAP100Q494V2 611 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 RIMS2Q9UQ26 1411 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 HSPA2P54652 639 aa9.24□□□□□ -0.93
CTNND1-207ENST00000426142 AXDND1Q5T1B0 1012 aaPredicted RBP9.24□□□□□ -0.93
CTNND1-207ENST00000426142 SPDYE4A6NLX3 237 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 PLCH2O75038 1416 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 UHRF1BP1LA0JNW5 1464 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 SSR1P43307 286 aaKnown RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 TNIP1Q15025 636 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 LUC7LQ9NQ29 371 aaKnown RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 CIZ1Q9ULV3 898 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 CCDC196A0A1B0GTZ2 297 aa9.23□□□□□ -0.93
CTNND1-207ENST00000426142 F8W031 263 aaPredicted RBP9.23□□□□□ -0.93
CTNND1-207ENST00000426142 LIG1P18858 919 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms