RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 AEBP1Q8IUX7 1158 aa11.93□□□□□ -0.5
TPM3P4-201ENST00000425942 IFNL2Q8IZJ0 200 aa11.93□□□□□ -0.5
TPM3P4-201ENST00000425942 PLSCR2Q9NRY7 297 aa11.93□□□□□ -0.5
TPM3P4-201ENST00000425942 NEFMP07197 916 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 BAG6P46379 1132 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 NKX1-1Q15270 411 aaPredicted RBP11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 C1orf141Q5JVX7 400 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 GAS2L2Q8NHY3 880 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 RSPH6AQ9H0K4 717 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 MAP3K5Q99683 1374 aa11.92□□□□□ -0.5
TPM3P4-201ENST00000425942 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 CYP27B1O15528 508 aa11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 PPP1R37O75864 691 aa11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 U2AF1L5P0DN76 240 aaPredicted RBP11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 PHKG2P15735 406 aa11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 U2AF1Q01081 240 aaKnown RBP eCLIP11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
TPM3P4-201ENST00000425942 LAMB4A4D0S4 1761 aa11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 HMOX1P09601 288 aa11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 AKAP4Q5JQC9 854 aa11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 ZNF530Q6P9A1 599 aaPredicted RBP11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 DDX54Q8TDD1 881 aaKnown RBP11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 MARVELD3Q96A59 401 aa11.9□□□□□ -0.5
TPM3P4-201ENST00000425942 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
TPM3P4-201ENST00000425942 HMGB2P26583 209 aaKnown RBP11.89□□□□□ -0.51
TPM3P4-201ENST00000425942 PRKAR2BP31323 418 aa11.89□□□□□ -0.51
TPM3P4-201ENST00000425942 DCAF5Q96JK2 942 aa11.89□□□□□ -0.51
TPM3P4-201ENST00000425942 TUBGCP6Q96RT7 1819 aa11.88□□□□□ -0.51
TPM3P4-201ENST00000425942 TRIM37O94972 964 aa11.88□□□□□ -0.51
TPM3P4-201ENST00000425942 FAM182BQ5T319 152 aa11.88□□□□□ -0.51
TPM3P4-201ENST00000425942 TJP1Q07157 1748 aa11.88□□□□□ -0.51
TPM3P4-201ENST00000425942 ERVV-2B6SEH9 535 aa11.87□□□□□ -0.51
TPM3P4-201ENST00000425942 PLSCR1O15162 318 aa11.87□□□□□ -0.51
TPM3P4-201ENST00000425942 CEMIPQ8WUJ3 1361 aa11.86□□□□□ -0.51
TPM3P4-201ENST00000425942 HTATSF1O43719 755 aaKnown RBP11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 MTHFSDQ2M296 383 aaKnown RBP11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 TMOD3Q9NYL9 352 aa11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 PCDH10Q9P2E7 1040 aa11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 C4BP0C0L5 1744 aa11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
TPM3P4-201ENST00000425942 GNAT3A8MTJ3 354 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 APBA3O96018 575 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 LMOD3Q0VAK6 560 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 SMARCC1Q92922 1105 aaPredicted RBP11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 PLEKHF1Q96S99 279 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 MRS2Q9HD23 443 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 CASZ1Q86V15 1759 aa11.84□□□□□ -0.51
TPM3P4-201ENST00000425942 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 KCPQ6ZWJ8 1503 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 CCER2I3L3R5 266 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 SLC27A3Q5K4L6 730 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 RUNDC1Q96C34 613 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 ACSBG1Q96GR2 724 aa11.83□□□□□ -0.52
TPM3P4-201ENST00000425942 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 EMP3P54852 163 aa11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 NFE2L2Q16236 605 aa11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 CDAN1Q8IWY9 1227 aa11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 RTF1Q92541 710 aaKnown RBP11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 SYTL4Q96C24 671 aaPredicted RBP11.82□□□□□ -0.52
TPM3P4-201ENST00000425942 C2orf72A6NCS6 295 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 KIF3CO14782 793 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 RNMTO43148 476 aaKnown RBP11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 KCNQ2O43526 872 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 DIEXFQ68CQ4 756 aaKnown RBP11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 CAMKK2Q96RR4 588 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 SLC52A2Q9HAB3 445 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 LRP5O75197 1615 aa11.81□□□□□ -0.52
TPM3P4-201ENST00000425942 C4AP0C0L4 1744 aa11.8□□□□□ -0.52
TPM3P4-201ENST00000425942 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
TPM3P4-201ENST00000425942 CABP4P57796 275 aa11.8□□□□□ -0.52
TPM3P4-201ENST00000425942 TEFQ10587 303 aa11.8□□□□□ -0.52
TPM3P4-201ENST00000425942 PHACTR3Q96KR7 559 aa11.8□□□□□ -0.52
TPM3P4-201ENST00000425942 EN1Q05925 392 aaPredicted RBP11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 MPRIPQ6WCQ1 1025 aa11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 DEFB132Q7Z7B7 95 aa11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 NGEFQ8N5V2 710 aa11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 PNISRQ8TF01 805 aaKnown RBP11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 ADAMTS8Q9UP79 889 aa11.79□□□□□ -0.52
TPM3P4-201ENST00000425942 EZH2Q15910 746 aaKnown RBP11.78□□□□□ -0.52
TPM3P4-201ENST00000425942 PIGBQ92521 554 aa11.78□□□□□ -0.52
TPM3P4-201ENST00000425942 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
TPM3P4-201ENST00000425942 TMPOP42166 694 aaKnown RBP11.77□□□□□ -0.53
TPM3P4-201ENST00000425942 TXNRD1Q16881 649 aa11.77□□□□□ -0.53
TPM3P4-201ENST00000425942 SCN7AQ01118 1682 aa11.77□□□□□ -0.53
TPM3P4-201ENST00000425942 BCORQ6W2J9 1755 aa11.77□□□□□ -0.53
TPM3P4-201ENST00000425942 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 POTEB3A0JP26 581 aa11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 CALD1Q05682 793 aaKnown RBP11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 POTEBQ6S5H4 581 aa11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 PTF1AQ7RTS3 328 aa11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 BABAM1Q9NWV8 329 aa11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
TPM3P4-201ENST00000425942 FAM205CA6NFA0 338 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 RIMBP2O15034 1052 aa11.75□□□□□ -0.53
TPM3P4-201ENST00000425942 CCDC184Q52MB2 194 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms