RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 NBPF7P0C2Y1 421 aaPredicted RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 PI4K2BQ8TCG2 481 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 SRCIN1Q9C0H9 1055 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 RPAP1Q9BWH6 1393 aaPredicted RBP17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 HSPA4P34932 840 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 NLRP6P59044 892 aa17.2■□□□□ 0.34
TPM3P9-201ENST00000424846 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 EIF2S2P20042 333 aaKnown RBP17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 SSH3Q8TE77 659 aa17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 TSPY26PQ9H489 355 aa17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 CNPY2Q9Y2B0 182 aa17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 AMOTL2Q9Y2J4 779 aa17.19■□□□□ 0.34
TPM3P9-201ENST00000424846 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
TPM3P9-201ENST00000424846 ZNF830Q96NB3 372 aaPredicted RBP17.18■□□□□ 0.34
TPM3P9-201ENST00000424846 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
TPM3P9-201ENST00000424846 SNX14Q9Y5W7 946 aa17.18■□□□□ 0.34
TPM3P9-201ENST00000424846 LARGE1O95461 756 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 HOXC9P31274 260 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 RHPN1Q8TCX5 695 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 PIK3C2AO00443 1686 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 KCNQ3O43525 872 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 LRRC37A3O60309 1634 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 SRGAP3O43295 1099 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 FAM13BQ9NYF5 915 aa17.17■□□□□ 0.34
TPM3P9-201ENST00000424846 TTC21AQ8NDW8 1320 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 NWD1Q149M9 1564 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 SGSM2O43147 1006 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 AK2P54819 239 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 TAF7Q15545 349 aaPredicted RBP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 JARID2Q92833 1246 aaPredicted RBP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 IL17RAQ96F46 866 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 TTC14Q96N46 770 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 LSG1Q9H089 658 aaKnown RBP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 ZMYND15Q9H091 742 aa17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
TPM3P9-201ENST00000424846 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
TPM3P9-201ENST00000424846 UQCRHLA0A096LP55 91 aa17.15■□□□□ 0.34
TPM3P9-201ENST00000424846 UQCRHP07919 91 aa17.15■□□□□ 0.34
TPM3P9-201ENST00000424846 LGR6Q9HBX8 967 aa17.15■□□□□ 0.34
TPM3P9-201ENST00000424846 RAD50Q92878 1312 aa17.15■□□□□ 0.34
TPM3P9-201ENST00000424846 POLA2Q14181 598 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 C17orf53Q8N3J3 647 aaPredicted RBP17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 ARID3AQ99856 593 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 USP25Q9UHP3 1055 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 WDR33Q9C0J8 1336 aaKnown RBP17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 GLIPR1L2Q4G1C9 344 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 CHPF2Q9P2E5 772 aa17.14■□□□□ 0.33
TPM3P9-201ENST00000424846 PLEKHG1Q9ULL1 1385 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 PLEKHG5O94827 1062 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 PTMAP06454 111 aaKnown RBP17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 SYT1P21579 422 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
TPM3P9-201ENST00000424846 HCLS1P14317 486 aaPredicted RBP17.12■□□□□ 0.33
TPM3P9-201ENST00000424846 PTH1RQ03431 593 aa17.12■□□□□ 0.33
TPM3P9-201ENST00000424846 FIBPO43427 364 aa17.12■□□□□ 0.33
TPM3P9-201ENST00000424846 AOX1Q06278 1338 aa17.11■□□□□ 0.33
TPM3P9-201ENST00000424846 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
TPM3P9-201ENST00000424846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.11■□□□□ 0.33
TPM3P9-201ENST00000424846 CASTP20810 708 aaKnown RBP17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 BEND3Q5T5X7 828 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 TSC1Q92574 1164 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 TTC12Q9H892 705 aaPredicted RBP17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 STX6O43752 255 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 ST3GAL1Q11201 340 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 C14orf37Q86TY3 774 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 CCDC83Q8IWF9 413 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
TPM3P9-201ENST00000424846 TERF1P54274 439 aa17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 ABTB2Q8N961 1025 aa17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 SYAP1Q96A49 352 aaPredicted RBP17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 KIF1BPQ96EK5 621 aa17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 RAB11FIP3O75154 756 aa17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 N4BP2Q86UW6 1770 aaPredicted RBP17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 MARF1Q9Y4F3 1742 aaKnown RBP17.09■□□□□ 0.33
TPM3P9-201ENST00000424846 PXDNLA1KZ92 1463 aa17.08■□□□□ 0.33
TPM3P9-201ENST00000424846 AP5Z1O43299 807 aa17.08■□□□□ 0.33
TPM3P9-201ENST00000424846 GIMAP6Q6P9H5 292 aa17.08■□□□□ 0.33
TPM3P9-201ENST00000424846 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.33
TPM3P9-201ENST00000424846 MCM5P33992 734 aa17.08■□□□□ 0.32
TPM3P9-201ENST00000424846 DNM1Q05193 864 aaKnown RBP17.08■□□□□ 0.32
TPM3P9-201ENST00000424846 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
TPM3P9-201ENST00000424846 F13A1P00488 732 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 CNTROBQ8N137 903 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 TMEM87AQ8NBN3 555 aa17.07■□□□□ 0.32
TPM3P9-201ENST00000424846 DNAAF4Q8WXU2 420 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms