RNA–Protein interactions for RNA: ENST00000424549.7

NPIPA1-202, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-202ENST00000424549 MPHOSPH9Q99550 1183 aa9.98□□□□□ -0.81
NPIPA1-202ENST00000424549 DICER1Q9UPY3 1922 aaKnown RBP9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 RASSF10A6NK89 507 aa9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 ITPK1Q13572 414 aa9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 DGKZQ13574 1117 aa9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 DEFB115Q30KQ5 88 aa9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 MPRIPQ6WCQ1 1025 aa9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 ZCRB1Q8TBF4 217 aaKnown RBP9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
NPIPA1-202ENST00000424549 DLL1O00548 723 aa9.96□□□□□ -0.82
NPIPA1-202ENST00000424549 ITGBL1O95965 494 aaPredicted RBP9.96□□□□□ -0.82
NPIPA1-202ENST00000424549 PPARGC1BQ86YN6 1023 aaKnown RBP9.96□□□□□ -0.82
NPIPA1-202ENST00000424549 NFKBIEO00221 500 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 CLCN6P51797 869 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 TMF1P82094 1093 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 HABP4Q5JVS0 413 aaKnown RBP9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 MON2Q7Z3U7 1717 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 ADAMTSL1Q8N6G6 1762 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 DLEC1Q9Y238 1755 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 A0A0C4DFX4 3053 aa9.95□□□□□ -0.82
NPIPA1-202ENST00000424549 GTPBP6O43824 516 aaPredicted RBP9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 GYS1P13807 737 aa9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 GRM1Q13255 1194 aa9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 RASEFQ8IZ41 740 aa9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 PARP3Q9Y6F1 533 aa9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 SZT2Q5T011 3432 aa9.94□□□□□ -0.82
NPIPA1-202ENST00000424549 TTC21AQ8NDW8 1320 aa9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 DDNO94850 711 aaPredicted RBP9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 BRPF1P55201 1214 aaPredicted RBP9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 DDR1Q08345 913 aa9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 NLGN1Q8N2Q7 840 aa9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 DCAF11Q8TEB1 546 aa9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 RNF25Q96BH1 459 aaPredicted RBP9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 ZBTB47Q9UFB7 747 aaPredicted RBP9.93□□□□□ -0.82
NPIPA1-202ENST00000424549 LOC102724428A0A0B4J2F2 783 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 GALR2O43603 387 aaPredicted RBP9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 SIK1P57059 783 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 CYP4F22Q6NT55 531 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 LDHDQ86WU2 507 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 CAPNS2Q96L46 248 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 BEGAINQ9BUH8 593 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 ABT1Q9ULW3 272 aaKnown RBP9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 ADAMTS7Q9UKP4 1686 aa9.92□□□□□ -0.82
NPIPA1-202ENST00000424549 AOC2O75106 756 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 FXR1P51114 621 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 DPY19L2Q6NUT2 758 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 NME9Q86XW9 330 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 PIGBQ92521 554 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 ARHGEF1Q92888 912 aaKnown RBP9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 MYH14Q7Z406 1995 aaKnown RBP9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 FER1L6Q2WGJ9 1857 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 SCN4AP35499 1836 aa9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 AFDNP55196 1824 aaKnown RBP9.91□□□□□ -0.82
NPIPA1-202ENST00000424549 USP31Q70CQ4 1352 aa9.9□□□□□ -0.82
NPIPA1-202ENST00000424549 FMR1Q06787 632 aaKnown RBP eCLIP9.9□□□□□ -0.82
NPIPA1-202ENST00000424549 USHBP1Q8N6Y0 703 aa9.9□□□□□ -0.82
NPIPA1-202ENST00000424549 SMARCC1Q92922 1105 aaPredicted RBP9.9□□□□□ -0.82
NPIPA1-202ENST00000424549 COL5A3P25940 1745 aaPredicted RBP9.9□□□□□ -0.83
NPIPA1-202ENST00000424549 NUBP1P53384 320 aa9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 NBPF1Q3BBV0 1214 aa9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 EAPPQ56P03 285 aaPredicted RBP9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 TRAPPC3LQ5T215 181 aa9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 GPR101Q96P66 508 aaPredicted RBP9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 TAF1DQ9H5J8 278 aaPredicted RBP9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 TRIOBPQ9H2D6 2365 aa9.89□□□□□ -0.83
NPIPA1-202ENST00000424549 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 CENPJQ9HC77 1338 aaPredicted RBP9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 ERFEQ4G0M1 354 aa9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 IP6K1Q92551 441 aa9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 GCC1Q96CN9 775 aa9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
NPIPA1-202ENST00000424549 CYP27B1O15528 508 aa9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 HMGB2P26583 209 aaKnown RBP9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 ATP6V1AP38606 617 aa9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 ASAP1Q9ULH1 1129 aa9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 RTCBQ9Y3I0 505 aaKnown RBP9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 TRPM7Q96QT4 1865 aa9.87□□□□□ -0.83
NPIPA1-202ENST00000424549 CACNA1SQ13698 1873 aa9.86□□□□□ -0.83
NPIPA1-202ENST00000424549 DCBLD2Q96PD2 775 aa9.86□□□□□ -0.83
NPIPA1-202ENST00000424549 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
NPIPA1-202ENST00000424549 TRIM26Q12899 539 aaPredicted RBP9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 NBPF6Q5VWK0 638 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 CNTROBQ8N137 903 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 NBPF4Q96M43 638 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 KDRP35968 1356 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 CD163L1Q9NR16 1453 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 COL11A2P13942 1736 aaPredicted RBP9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 NRXN2Q9P2S2 1712 aa9.85□□□□□ -0.83
NPIPA1-202ENST00000424549 CEP290O15078 2479 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 PCDH11XQ9BZA7 1347 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 PCDH11YQ9BZA8 1340 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 POLRMTO00411 1230 aaKnown RBP9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 FBLN1P23142 703 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 RFC4P35249 363 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 MS4A3Q96HJ5 214 aa9.84□□□□□ -0.83
NPIPA1-202ENST00000424549 CARMIL3Q8ND23 1372 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms