RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 HDAC1Q13547 482 aaPredicted RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 CEP85Q6P2H3 762 aa12.29□□□□□ -0.44
SSPN-202ENST00000422622 GBP4Q96PP9 640 aa12.29□□□□□ -0.44
SSPN-202ENST00000422622 NAP1L2Q9ULW6 460 aaPredicted RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 HTATSF1O43719 755 aaKnown RBP12.29□□□□□ -0.44
SSPN-202ENST00000422622 ANO2Q9NQ90 1003 aa12.29□□□□□ -0.44
SSPN-202ENST00000422622 GPTP24298 496 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 G3BP1Q13283 466 aaKnown RBP eCLIP12.28□□□□□ -0.44
SSPN-202ENST00000422622 FMNL2Q96PY5 1086 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 LRRCC1Q9C099 1032 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 PNMA6EA0A0J9YXQ4 647 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 IFIT2P09913 472 aaKnown RBP12.28□□□□□ -0.44
SSPN-202ENST00000422622 NEUROD6Q96NK8 337 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 FOXD4L6Q3SYB3 417 aaPredicted RBP12.28□□□□□ -0.44
SSPN-202ENST00000422622 FOXD4L3Q6VB84 417 aaPredicted RBP12.28□□□□□ -0.44
SSPN-202ENST00000422622 SPATA31A3Q5VYP0 1347 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 A1BGP04217 495 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 NUCB1Q02818 461 aa12.28□□□□□ -0.44
SSPN-202ENST00000422622 EXOC5O00471 708 aa12.27□□□□□ -0.44
SSPN-202ENST00000422622 PHKG2P15735 406 aa12.27□□□□□ -0.44
SSPN-202ENST00000422622 NFKBIBQ15653 356 aa12.27□□□□□ -0.44
SSPN-202ENST00000422622 UBE3BQ7Z3V4 1068 aa12.27□□□□□ -0.44
SSPN-202ENST00000422622 KLHDC4Q8TBB5 520 aa12.27□□□□□ -0.44
SSPN-202ENST00000422622 FGD1P98174 961 aa12.27□□□□□ -0.45
SSPN-202ENST00000422622 GORABQ5T7V8 394 aa12.27□□□□□ -0.45
SSPN-202ENST00000422622 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.45
SSPN-202ENST00000422622 SIRT2Q8IXJ6 389 aa12.27□□□□□ -0.45
SSPN-202ENST00000422622 DRC7Q8IY82 874 aa12.27□□□□□ -0.45
SSPN-202ENST00000422622 CYP27B1O15528 508 aa12.26□□□□□ -0.45
SSPN-202ENST00000422622 SNRPA1P09661 255 aaKnown RBP12.26□□□□□ -0.45
SSPN-202ENST00000422622 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
SSPN-202ENST00000422622 ANKRD44Q8N8A2 993 aa12.26□□□□□ -0.45
SSPN-202ENST00000422622 SLC52A2Q9HAB3 445 aa12.26□□□□□ -0.45
SSPN-202ENST00000422622 FAM182BQ5T319 152 aa12.26□□□□□ -0.45
SSPN-202ENST00000422622 GIGYF1O75420 1035 aaPredicted RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 CHAF1AQ13111 956 aaPredicted RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 DCAF5Q96JK2 942 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 ABCC4O15439 1325 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 FRAT2O75474 233 aaPredicted RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 INTS3Q68E01 1043 aaKnown RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 CCDC8Q9H0W5 538 aaPredicted RBP12.25□□□□□ -0.45
SSPN-202ENST00000422622 A0A087WZG4 1122 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 CDC45O75419 566 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 ANKRD13DQ6ZTN6 518 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 KIAA1211Q6ZU35 1233 aa12.25□□□□□ -0.45
SSPN-202ENST00000422622 CLASRPQ8N2M8 674 aaKnown RBP12.24□□□□□ -0.45
SSPN-202ENST00000422622 HYPKQ9NX55 129 aa12.24□□□□□ -0.45
SSPN-202ENST00000422622 BICDL1Q6ZP65 573 aa12.24□□□□□ -0.45
SSPN-202ENST00000422622 AACSQ86V21 672 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 ITSN1Q15811 1721 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 TBC1D9Q6ZT07 1266 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 TOM1O60784 492 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 KCNQ4P56696 695 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 USP44Q9H0E7 712 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 SHPRHQ149N8 1683 aa12.23□□□□□ -0.45
SSPN-202ENST00000422622 DNAJC2Q99543 621 aaKnown RBP12.23□□□□□ -0.45
SSPN-202ENST00000422622 RGPD8O14715 1765 aaPredicted RBP12.22□□□□□ -0.45
SSPN-202ENST00000422622 KSR2Q6VAB6 950 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 MX1P20591 662 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 KIAA2012Q0VF49 1180 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 DCTPP1Q9H773 170 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 TBC1D2BQ9UPU7 963 aa12.22□□□□□ -0.45
SSPN-202ENST00000422622 DIAPH3Q9NSV4 1193 aa12.21□□□□□ -0.45
SSPN-202ENST00000422622 PRIM1P49642 420 aaKnown RBP12.21□□□□□ -0.45
SSPN-202ENST00000422622 GPATCH3Q96I76 525 aa12.21□□□□□ -0.45
SSPN-202ENST00000422622 ASAP1Q9ULH1 1129 aa12.21□□□□□ -0.45
SSPN-202ENST00000422622 SSH2Q76I76 1423 aa12.21□□□□□ -0.45
SSPN-202ENST00000422622 FAM98CQ17RN3 349 aaKnown RBP12.21□□□□□ -0.46
SSPN-202ENST00000422622 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
SSPN-202ENST00000422622 KIF6Q6ZMV9 814 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 DDX49Q9Y6V7 483 aaKnown RBP12.2□□□□□ -0.46
SSPN-202ENST00000422622 CRB1P82279 1406 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 SDSP20132 328 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 DDB1Q16531 1140 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 PLEKHM2Q8IWE5 1019 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 BOLA2Q9H3K6 86 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 DDX21Q9NR30 783 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSPN-202ENST00000422622 FAM13BQ9NYF5 915 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 KDRP35968 1356 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 GRM8O00222 908 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 TTLL7Q6ZT98 887 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 PCDH11XQ9BZA7 1347 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 PCDH11YQ9BZA8 1340 aa12.2□□□□□ -0.46
SSPN-202ENST00000422622 ATP8B2P98198 1209 aa12.19□□□□□ -0.46
SSPN-202ENST00000422622 BICC1Q9H694 974 aaKnown RBP12.19□□□□□ -0.46
SSPN-202ENST00000422622 MCCP23508 829 aa12.19□□□□□ -0.46
SSPN-202ENST00000422622 LARP6Q9BRS8 491 aaKnown RBP12.19□□□□□ -0.46
SSPN-202ENST00000422622 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
SSPN-202ENST00000422622 USP32Q8NFA0 1604 aa12.19□□□□□ -0.46
SSPN-202ENST00000422622 RHPN1Q8TCX5 695 aa12.18□□□□□ -0.46
SSPN-202ENST00000422622 STARD3NLO95772 234 aa12.18□□□□□ -0.46
SSPN-202ENST00000422622 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
SSPN-202ENST00000422622 MST1RQ04912 1400 aa12.18□□□□□ -0.46
SSPN-202ENST00000422622 PDE1AP54750 535 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms