RNA–Protein interactions for RNA: ENST00000421434.5

SCRN1-204, Transcript of secernin 1, humanhuman

TSL 3

Gene SCRN1, Length 1,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-204ENST00000421434 CANXP27824 592 aaKnown RBP12.7□□□□□ -0.38
SCRN1-204ENST00000421434 HTRA3P83110 453 aa12.7□□□□□ -0.38
SCRN1-204ENST00000421434 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
SCRN1-204ENST00000421434 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
SCRN1-204ENST00000421434 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
SCRN1-204ENST00000421434 BICDL1Q6ZP65 573 aa12.69□□□□□ -0.38
SCRN1-204ENST00000421434 BCL2L12Q9HB09 334 aa12.69□□□□□ -0.38
SCRN1-204ENST00000421434 KDM2BQ8NHM5 1336 aa12.68□□□□□ -0.38
SCRN1-204ENST00000421434 SERPINB2P05120 415 aa12.68□□□□□ -0.38
SCRN1-204ENST00000421434 RASSF7Q02833 373 aa12.68□□□□□ -0.38
SCRN1-204ENST00000421434 RBM46Q8TBY0 533 aaKnown RBP12.68□□□□□ -0.38
SCRN1-204ENST00000421434 U2SURPO15042 1029 aaKnown RBP12.67□□□□□ -0.38
SCRN1-204ENST00000421434 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
SCRN1-204ENST00000421434 ZNF330Q9Y3S2 320 aaPredicted RBP12.67□□□□□ -0.38
SCRN1-204ENST00000421434 TJP1Q07157 1748 aa12.67□□□□□ -0.38
SCRN1-204ENST00000421434 COL15A1P39059 1388 aa12.67□□□□□ -0.38
SCRN1-204ENST00000421434 KCPQ6ZWJ8 1503 aa12.67□□□□□ -0.38
SCRN1-204ENST00000421434 STARD3NLO95772 234 aa12.66□□□□□ -0.38
SCRN1-204ENST00000421434 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
SCRN1-204ENST00000421434 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
SCRN1-204ENST00000421434 IL17REQ8NFR9 667 aa12.66□□□□□ -0.38
SCRN1-204ENST00000421434 SCN11AQ9UI33 1791 aa12.66□□□□□ -0.38
SCRN1-204ENST00000421434 H0YIN7 160 aa12.65□□□□□ -0.38
SCRN1-204ENST00000421434 PRELPP51888 382 aa12.65□□□□□ -0.38
SCRN1-204ENST00000421434 TEFQ10587 303 aa12.65□□□□□ -0.38
SCRN1-204ENST00000421434 CCDC24Q8N4L8 307 aa12.65□□□□□ -0.38
SCRN1-204ENST00000421434 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
SCRN1-204ENST00000421434 ZNF496Q96IT1 587 aaPredicted RBP12.65□□□□□ -0.38
SCRN1-204ENST00000421434 BRCA1P38398 1863 aaKnown RBP12.65□□□□□ -0.38
SCRN1-204ENST00000421434 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
SCRN1-204ENST00000421434 FSTL1Q12841 308 aa12.64□□□□□ -0.39
SCRN1-204ENST00000421434 TBC1D9BQ66K14 1250 aa12.64□□□□□ -0.39
SCRN1-204ENST00000421434 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
SCRN1-204ENST00000421434 ZNF622Q969S3 477 aaKnown RBP eCLIP12.64□□□□□ -0.39
SCRN1-204ENST00000421434 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
SCRN1-204ENST00000421434 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
SCRN1-204ENST00000421434 A0A087WZG4 1122 aa12.63□□□□□ -0.39
SCRN1-204ENST00000421434 GNAT3A8MTJ3 354 aa12.63□□□□□ -0.39
SCRN1-204ENST00000421434 LMNB1P20700 586 aa12.63□□□□□ -0.39
SCRN1-204ENST00000421434 ADAMTS7Q9UKP4 1686 aa12.63□□□□□ -0.39
SCRN1-204ENST00000421434 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
SCRN1-204ENST00000421434 MRC1P22897 1456 aa12.62□□□□□ -0.39
SCRN1-204ENST00000421434 CARMIL3Q8ND23 1372 aa12.62□□□□□ -0.39
SCRN1-204ENST00000421434 A1BGP04217 495 aa12.62□□□□□ -0.39
SCRN1-204ENST00000421434 GAS2L2Q8NHY3 880 aa12.62□□□□□ -0.39
SCRN1-204ENST00000421434 TEX13AQ9BXU3 409 aaPredicted RBP12.62□□□□□ -0.39
SCRN1-204ENST00000421434 GLTPD2A6NH11 291 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 KCNQ3O43525 872 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 C21orf2O43822 256 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 VEGFAP15692 232 aaPredicted RBP12.61□□□□□ -0.39
SCRN1-204ENST00000421434 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
SCRN1-204ENST00000421434 SMC1BQ8NDV3 1235 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 KLRG1Q96E93 195 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 PHACTR3Q96KR7 559 aa12.61□□□□□ -0.39
SCRN1-204ENST00000421434 NFKBIEO00221 500 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 NPHP1O15259 732 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 PDE6BP35913 854 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 FMNL2Q96PY5 1086 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 BRIP1Q9BX63 1249 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 PCNTO95613 3336 aa12.6□□□□□ -0.39
SCRN1-204ENST00000421434 HEG1Q9ULI3 1381 aa12.59□□□□□ -0.39
SCRN1-204ENST00000421434 BTBD11A6QL63 1104 aa12.59□□□□□ -0.39
SCRN1-204ENST00000421434 PIP4K2AP48426 406 aaPredicted RBP12.59□□□□□ -0.39
SCRN1-204ENST00000421434 PRR5LQ6MZQ0 368 aa12.59□□□□□ -0.39
SCRN1-204ENST00000421434 SETDB2Q96T68 719 aa12.59□□□□□ -0.39
SCRN1-204ENST00000421434 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
SCRN1-204ENST00000421434 SBF1O95248 1867 aa12.59□□□□□ -0.39
SCRN1-204ENST00000421434 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
SCRN1-204ENST00000421434 IL6STP40189 918 aaPredicted RBP12.58□□□□□ -0.4
SCRN1-204ENST00000421434 DPY19L2Q6NUT2 758 aa12.58□□□□□ -0.4
SCRN1-204ENST00000421434 USP16Q9Y5T5 823 aa12.58□□□□□ -0.4
SCRN1-204ENST00000421434 ZC3H4Q9UPT8 1303 aaKnown RBP12.58□□□□□ -0.4
SCRN1-204ENST00000421434 PRAMEF22A3QJZ6 481 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 POTECB2RU33 542 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 CAMTA2O94983 1202 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 ERFEQ4G0M1 354 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 COL13A1Q5TAT6 717 aaPredicted RBP12.57□□□□□ -0.4
SCRN1-204ENST00000421434 DZIP3Q86Y13 1208 aaKnown RBP12.57□□□□□ -0.4
SCRN1-204ENST00000421434 JMYQ8N9B5 988 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 CNBD1Q8NA66 436 aa12.57□□□□□ -0.4
SCRN1-204ENST00000421434 U2AF1L5P0DN76 240 aaPredicted RBP12.56□□□□□ -0.4
SCRN1-204ENST00000421434 U2AF1Q01081 240 aaKnown RBP eCLIP12.56□□□□□ -0.4
SCRN1-204ENST00000421434 MCM10Q7L590 875 aa12.56□□□□□ -0.4
SCRN1-204ENST00000421434 CFAP53Q96M91 514 aa12.56□□□□□ -0.4
SCRN1-204ENST00000421434 RSPH6AQ9H0K4 717 aa12.56□□□□□ -0.4
SCRN1-204ENST00000421434 PDZRN3Q9UPQ7 1066 aa12.56□□□□□ -0.4
SCRN1-204ENST00000421434 COL3A1P02461 1466 aaPredicted RBP12.55□□□□□ -0.4
SCRN1-204ENST00000421434 NRXN2Q9P2S2 1712 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 ST5P78524 1137 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 RTF1Q92541 710 aaKnown RBP12.55□□□□□ -0.4
SCRN1-204ENST00000421434 CNKSR1Q969H4 720 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 NUDCQ9Y266 331 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 VIRMAQ69YN4 1812 aaKnown RBP12.55□□□□□ -0.4
SCRN1-204ENST00000421434 NPC1L1Q9UHC9 1359 aa12.55□□□□□ -0.4
SCRN1-204ENST00000421434 WDR90Q96KV7 1748 aa12.54□□□□□ -0.4
SCRN1-204ENST00000421434 SRGNP10124 158 aa12.54□□□□□ -0.4
SCRN1-204ENST00000421434 PRPF40BQ6NWY9 871 aaKnown RBP12.54□□□□□ -0.4
SCRN1-204ENST00000421434 TAOK3Q9H2K8 898 aa12.54□□□□□ -0.4
SCRN1-204ENST00000421434 CEMIPQ8WUJ3 1361 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms