RNA–Protein interactions for RNA: ENST00000421339.3

TBC1D1-207, Transcript of TBC1 domain family member 1, humanhuman

TSL 5

Gene TBC1D1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-207ENST00000421339 PXDNLA1KZ92 1463 aa11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 CAPN15O75808 1086 aa11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 HMGB2P26583 209 aaKnown RBP11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 HTRA3P83110 453 aa11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 MVPQ14764 893 aaKnown RBP11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 RBM46Q8TBY0 533 aaKnown RBP11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 NMRK2Q9NPI5 230 aa11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 PALLDQ8WX93 1383 aa11.28□□□□□ -0.6
TBC1D1-207ENST00000421339 HOXC9P31274 260 aa11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 PRKAR2BP31323 418 aa11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 IL13P35225 146 aa11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 SMIM5Q71RC9 77 aa11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 TNRC6CQ9HCJ0 1690 aaKnown RBP11.27□□□□□ -0.61
TBC1D1-207ENST00000421339 RGS3P49796 1198 aa11.26□□□□□ -0.61
TBC1D1-207ENST00000421339 NFE2L2Q16236 605 aa11.26□□□□□ -0.61
TBC1D1-207ENST00000421339 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
TBC1D1-207ENST00000421339 TNS4Q8IZW8 715 aa11.26□□□□□ -0.61
TBC1D1-207ENST00000421339 PCDHB15Q9Y5E8 787 aa11.26□□□□□ -0.61
TBC1D1-207ENST00000421339 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 ALDH1L2Q3SY69 923 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 SSH1Q8WYL5 1049 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 COG3Q96JB2 828 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 SMC4Q9NTJ3 1288 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 MAP3K19Q56UN5 1328 aa11.25□□□□□ -0.61
TBC1D1-207ENST00000421339 NEFMP07197 916 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 SSFA2P28290 1259 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 BRPF1P55201 1214 aaPredicted RBP11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 CALD1Q05682 793 aaKnown RBP11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 FSTL1Q12841 308 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 NBPF6Q5VWK0 638 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 ZNF428Q96B54 188 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 NBPF4Q96M43 638 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 C10orf71Q711Q0 1435 aa11.24□□□□□ -0.61
TBC1D1-207ENST00000421339 TRIM27P14373 513 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 FBLN1P23142 703 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 TGFB2P61812 414 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 ATF7IPQ6VMQ6 1270 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 FTSJ3Q8IY81 847 aaKnown RBP11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 AK7Q96M32 723 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 KIF16BQ96L93 1317 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
TBC1D1-207ENST00000421339 PPM1GO15355 546 aaPredicted RBP11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 PHF14O94880 888 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 MPRIPQ6WCQ1 1025 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 KCPQ6ZWJ8 1503 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 PHACTR3Q96KR7 559 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 IFT57Q9NWB7 429 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 DDX19BQ9UMR2 479 aa11.22□□□□□ -0.61
TBC1D1-207ENST00000421339 DLG5Q8TDM6 1919 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 CCDC88AQ3V6T2 1871 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 COL5A3P25940 1745 aaPredicted RBP11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 ZNF831Q5JPB2 1677 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 RTL1A6NKG5 1358 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 PLEKHG2Q9H7P9 1386 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 CYP27B1O15528 508 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 ZNF853P0CG23 659 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 LMOD3Q0VAK6 560 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 HDAC1Q13547 482 aaPredicted RBP11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 LINC00116Q8NCU8 138 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 SMARCC1Q92922 1105 aaPredicted RBP11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 PDZRN3Q9UPQ7 1066 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
TBC1D1-207ENST00000421339 PCDH11XQ9BZA7 1347 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 PCDH11YQ9BZA8 1340 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 HMOX1P09601 288 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 AMPHP49418 695 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 GNAI1P63096 354 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 ARHGAP27Q6ZUM4 889 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 USHBP1Q8N6Y0 703 aa11.2□□□□□ -0.62
TBC1D1-207ENST00000421339 MYH14Q7Z406 1995 aaKnown RBP11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 A0A0G2JLW4 131 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 SLC34A2O95436 690 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 MMP10P09238 476 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 KCNA3P22001 575 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 RAPGEF4Q8WZA2 1011 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 PIGBQ92521 554 aa11.19□□□□□ -0.62
TBC1D1-207ENST00000421339 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 VAMP4O75379 141 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 DPEP1P16444 411 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 TATP17735 454 aaPredicted RBP11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 SIK1P57059 783 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 ITPK1Q13572 414 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 NBR1Q14596 966 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 RRS1Q15050 365 aaKnown RBP11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 NKX1-1Q15270 411 aaPredicted RBP11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 ITPRIPQ8IWB1 547 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 TMEM57Q8N5G2 664 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 MRPL50Q8N5N7 158 aaKnown RBP11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 ARHGAP45Q92619 1136 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 ZBTB40Q9NUA8 1239 aa11.18□□□□□ -0.62
TBC1D1-207ENST00000421339 HSPA1AP0DMV8 641 aaKnown RBP11.17□□□□□ -0.62
TBC1D1-207ENST00000421339 HSPA1BP0DMV9 641 aaKnown RBP11.17□□□□□ -0.62
TBC1D1-207ENST00000421339 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms