RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 KLRG1Q96E93 195 aa16.01■□□□□ 0.15
CHCHD4-203ENST00000420103 SLC52A2Q9HAB3 445 aa16.01■□□□□ 0.15
CHCHD4-203ENST00000420103 ZBTB1Q9Y2K1 713 aa16.01■□□□□ 0.15
CHCHD4-203ENST00000420103 WDR90Q96KV7 1748 aa16.01■□□□□ 0.15
CHCHD4-203ENST00000420103 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
CHCHD4-203ENST00000420103 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
CHCHD4-203ENST00000420103 HMOX1P09601 288 aa15.99■□□□□ 0.15
CHCHD4-203ENST00000420103 AKAP4Q5JQC9 854 aa15.99■□□□□ 0.15
CHCHD4-203ENST00000420103 SCN11AQ9UI33 1791 aa15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 SBF1O95248 1867 aa15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 FSTL1Q12841 308 aa15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 C16orf71Q8IYS4 520 aaPredicted RBP15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 JMYQ8N9B5 988 aa15.98■□□□□ 0.15
CHCHD4-203ENST00000420103 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 VIRMAQ69YN4 1812 aaKnown RBP15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 ZPR1O75312 459 aa15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 MTHFSDQ2M296 383 aaKnown RBP15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 NARFQ9UHQ1 456 aa15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 KNSTRNQ9Y448 316 aa15.97■□□□□ 0.15
CHCHD4-203ENST00000420103 NFKBIEO00221 500 aa15.96■□□□□ 0.15
CHCHD4-203ENST00000420103 SERPINB2P05120 415 aa15.96■□□□□ 0.15
CHCHD4-203ENST00000420103 COL15A1P39059 1388 aa15.96■□□□□ 0.15
CHCHD4-203ENST00000420103 MRC1P22897 1456 aa15.96■□□□□ 0.14
CHCHD4-203ENST00000420103 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
CHCHD4-203ENST00000420103 POTECB2RU33 542 aa15.95■□□□□ 0.14
CHCHD4-203ENST00000420103 CCDC24Q8N4L8 307 aa15.95■□□□□ 0.14
CHCHD4-203ENST00000420103 NRXN2Q9P2S2 1712 aa15.94■□□□□ 0.14
CHCHD4-203ENST00000420103 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
CHCHD4-203ENST00000420103 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
CHCHD4-203ENST00000420103 C2CD5Q86YS7 1000 aa15.93■□□□□ 0.14
CHCHD4-203ENST00000420103 GLTPD2A6NH11 291 aa15.92■□□□□ 0.14
CHCHD4-203ENST00000420103 LMNB1P20700 586 aa15.92■□□□□ 0.14
CHCHD4-203ENST00000420103 TBC1D9BQ66K14 1250 aa15.92■□□□□ 0.14
CHCHD4-203ENST00000420103 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 EIF5P55010 431 aaKnown RBP15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 CC2D1BQ5T0F9 858 aaKnown RBP15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 TTLL6Q8N841 843 aa15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 SMC1BQ8NDV3 1235 aa15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 ZNF219Q9P2Y4 722 aaPredicted RBP15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
CHCHD4-203ENST00000420103 TNRC6CQ9HCJ0 1690 aaKnown RBP15.9■□□□□ 0.14
CHCHD4-203ENST00000420103 CAPN15O75808 1086 aa15.9■□□□□ 0.14
CHCHD4-203ENST00000420103 CNGB1Q14028 1251 aaPredicted RBP15.9■□□□□ 0.14
CHCHD4-203ENST00000420103 IL17REQ8NFR9 667 aa15.9■□□□□ 0.14
CHCHD4-203ENST00000420103 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
CHCHD4-203ENST00000420103 VEGFAP15692 232 aaPredicted RBP15.89■□□□□ 0.13
CHCHD4-203ENST00000420103 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
CHCHD4-203ENST00000420103 DLEC1Q9Y238 1755 aa15.88■□□□□ 0.13
CHCHD4-203ENST00000420103 H0YIN7 160 aa15.88■□□□□ 0.13
CHCHD4-203ENST00000420103 KCNQ3O43525 872 aa15.88■□□□□ 0.13
CHCHD4-203ENST00000420103 TBC1D2BQ9UPU7 963 aa15.88■□□□□ 0.13
CHCHD4-203ENST00000420103 ANKRD31Q8N7Z5 1873 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 C21orf2O43822 256 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 POTEIP0CG38 1075 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 POTEJP0CG39 1038 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 PRR5LQ6MZQ0 368 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 ZC3H4Q9UPT8 1303 aaKnown RBP15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 UBR2Q8IWV8 1755 aa15.87■□□□□ 0.13
CHCHD4-203ENST00000420103 DIAPH1O60610 1272 aaKnown RBP15.86■□□□□ 0.13
CHCHD4-203ENST00000420103 A1BGP04217 495 aa15.86■□□□□ 0.13
CHCHD4-203ENST00000420103 ZNF622Q969S3 477 aaKnown RBP eCLIP15.86■□□□□ 0.13
CHCHD4-203ENST00000420103 HSPA1AP0DMV8 641 aaKnown RBP15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 HSPA1BP0DMV9 641 aaKnown RBP15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 PIP4K2AP48426 406 aaPredicted RBP15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 HEG1Q9ULI3 1381 aa15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 COL11A2P13942 1736 aaPredicted RBP15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
CHCHD4-203ENST00000420103 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
CHCHD4-203ENST00000420103 STARD3NLO95772 234 aa15.84■□□□□ 0.13
CHCHD4-203ENST00000420103 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
CHCHD4-203ENST00000420103 TNS4Q8IZW8 715 aa15.84■□□□□ 0.13
CHCHD4-203ENST00000420103 ZNF330Q9Y3S2 320 aaPredicted RBP15.84■□□□□ 0.13
CHCHD4-203ENST00000420103 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
CHCHD4-203ENST00000420103 CAMTA2O94983 1202 aa15.83■□□□□ 0.12
CHCHD4-203ENST00000420103 BRIP1Q9BX63 1249 aa15.83■□□□□ 0.12
CHCHD4-203ENST00000420103 DDNO94850 711 aaPredicted RBP15.82■□□□□ 0.12
CHCHD4-203ENST00000420103 ERFEQ4G0M1 354 aa15.82■□□□□ 0.12
CHCHD4-203ENST00000420103 TTC5Q8N0Z6 440 aa15.82■□□□□ 0.12
CHCHD4-203ENST00000420103 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
CHCHD4-203ENST00000420103 NPC1L1Q9UHC9 1359 aa15.82■□□□□ 0.12
CHCHD4-203ENST00000420103 SIPA1L3O60292 1781 aaPredicted RBP15.81■□□□□ 0.12
CHCHD4-203ENST00000420103 USP16Q9Y5T5 823 aa15.81■□□□□ 0.12
CHCHD4-203ENST00000420103 SCN7AQ01118 1682 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 A0A087WZG4 1122 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 GNAT3A8MTJ3 354 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 U2SURPO15042 1029 aaKnown RBP15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 OLFM4Q6UX06 510 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 FER1L6Q2WGJ9 1857 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 SLX4Q8IY92 1834 aa15.8■□□□□ 0.12
CHCHD4-203ENST00000420103 SRGNP10124 158 aa15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 PDE6BP35913 854 aa15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 TEFQ10587 303 aa15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 PRPF40BQ6NWY9 871 aaKnown RBP15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 C7orf43Q8WVR3 580 aa15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 MKRN1Q9UHC7 482 aaKnown RBP15.79■□□□□ 0.12
CHCHD4-203ENST00000420103 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
CHCHD4-203ENST00000420103 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
CHCHD4-203ENST00000420103 LTBP3Q9NS15 1303 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms