RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
TNFAIP3-202ENST00000420009 HTRA3P83110 453 aa14.06□□□□□ -0.16
TNFAIP3-202ENST00000420009 C16orf71Q8IYS4 520 aaPredicted RBP14.06□□□□□ -0.16
TNFAIP3-202ENST00000420009 MTHFSP49914 203 aa14.05□□□□□ -0.16
TNFAIP3-202ENST00000420009 AEBP1Q8IUX7 1158 aa14.05□□□□□ -0.16
TNFAIP3-202ENST00000420009 RNF181Q9P0P0 153 aa14.05□□□□□ -0.16
TNFAIP3-202ENST00000420009 POLRMTO00411 1230 aaKnown RBP14.04□□□□□ -0.16
TNFAIP3-202ENST00000420009 CHRNA5P30532 468 aa14.04□□□□□ -0.16
TNFAIP3-202ENST00000420009 INTS5Q6P9B9 1019 aaKnown RBP14.04□□□□□ -0.16
TNFAIP3-202ENST00000420009 ZC3H4Q9UPT8 1303 aaKnown RBP14.04□□□□□ -0.16
TNFAIP3-202ENST00000420009 MRC1P22897 1456 aa14.04□□□□□ -0.16
TNFAIP3-202ENST00000420009 TM4SF1P30408 202 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 C1orf141Q5JVX7 400 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 NRXN2Q9P2S2 1712 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 SCN11AQ9UI33 1791 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 SBF1O95248 1867 aa14.03□□□□□ -0.16
TNFAIP3-202ENST00000420009 SOS1Q07889 1333 aaPredicted RBP14.02□□□□□ -0.17
TNFAIP3-202ENST00000420009 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
TNFAIP3-202ENST00000420009 COL13A1Q5TAT6 717 aaPredicted RBP14.01□□□□□ -0.17
TNFAIP3-202ENST00000420009 RRAGCQ9HB90 399 aa14.01□□□□□ -0.17
TNFAIP3-202ENST00000420009 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
TNFAIP3-202ENST00000420009 PITPNM1O00562 1244 aa14□□□□□ -0.17
TNFAIP3-202ENST00000420009 SULT6B1Q6IMI4 303 aa14□□□□□ -0.17
TNFAIP3-202ENST00000420009 DNAJC10Q8IXB1 793 aa14□□□□□ -0.17
TNFAIP3-202ENST00000420009 SMC1BQ8NDV3 1235 aa14□□□□□ -0.17
TNFAIP3-202ENST00000420009 POLR3GLQ9BT43 218 aa14□□□□□ -0.17
TNFAIP3-202ENST00000420009 FXR2P51116 673 aaKnown RBP eCLIP13.99□□□□□ -0.17
TNFAIP3-202ENST00000420009 RASSF7Q02833 373 aa13.99□□□□□ -0.17
TNFAIP3-202ENST00000420009 USPL1Q5W0Q7 1092 aa13.99□□□□□ -0.17
TNFAIP3-202ENST00000420009 PANK3Q9H999 370 aa13.99□□□□□ -0.17
TNFAIP3-202ENST00000420009 AFDNP55196 1824 aaKnown RBP13.99□□□□□ -0.17
TNFAIP3-202ENST00000420009 COL15A1P39059 1388 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 ZPR1O75312 459 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 CYP19A1P11511 503 aaPredicted RBP13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 IL13P35225 146 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 PRELPP51888 382 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 NFIXQ14938 502 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 AKAP4Q5JQC9 854 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 SLC52A2Q9HAB3 445 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 TIAM2Q8IVF5 1701 aa13.98□□□□□ -0.17
TNFAIP3-202ENST00000420009 LMNB1P20700 586 aa13.97□□□□□ -0.17
TNFAIP3-202ENST00000420009 BCL2L12Q9HB09 334 aa13.97□□□□□ -0.17
TNFAIP3-202ENST00000420009 NARFQ9UHQ1 456 aa13.97□□□□□ -0.17
TNFAIP3-202ENST00000420009 CARMIL3Q8ND23 1372 aa13.96□□□□□ -0.17
TNFAIP3-202ENST00000420009 GLTPD2A6NH11 291 aa13.96□□□□□ -0.17
TNFAIP3-202ENST00000420009 MORC1Q86VD1 984 aa13.96□□□□□ -0.17
TNFAIP3-202ENST00000420009 ZBTB1Q9Y2K1 713 aa13.96□□□□□ -0.17
TNFAIP3-202ENST00000420009 NFKBIEO00221 500 aa13.95□□□□□ -0.18
TNFAIP3-202ENST00000420009 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
TNFAIP3-202ENST00000420009 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
TNFAIP3-202ENST00000420009 TNS4Q8IZW8 715 aa13.94□□□□□ -0.18
TNFAIP3-202ENST00000420009 TTLL6Q8N841 843 aa13.94□□□□□ -0.18
TNFAIP3-202ENST00000420009 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
TNFAIP3-202ENST00000420009 RNMTO43148 476 aaKnown RBP13.93□□□□□ -0.18
TNFAIP3-202ENST00000420009 SERPINB2P05120 415 aa13.93□□□□□ -0.18
TNFAIP3-202ENST00000420009 SLC39A6Q13433 755 aa13.93□□□□□ -0.18
TNFAIP3-202ENST00000420009 VSIG10Q8N0Z9 540 aa13.93□□□□□ -0.18
TNFAIP3-202ENST00000420009 CLSPNQ9HAW4 1339 aa13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 SCN7AQ01118 1682 aa13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 HSPA1AP0DMV8 641 aaKnown RBP13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 HSPA1BP0DMV9 641 aaKnown RBP13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 HSPA5P11021 654 aaKnown RBP13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.183e-7■■■■■ 30.4
TNFAIP3-202ENST00000420009 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
TNFAIP3-202ENST00000420009 COL11A2P13942 1736 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP3-202ENST00000420009 POTECB2RU33 542 aa13.91□□□□□ -0.18
TNFAIP3-202ENST00000420009 TRIM26Q12899 539 aaPredicted RBP13.91□□□□□ -0.18
TNFAIP3-202ENST00000420009 VIRMAQ69YN4 1812 aaKnown RBP13.91□□□□□ -0.18
TNFAIP3-202ENST00000420009 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
TNFAIP3-202ENST00000420009 H0YIN7 160 aa13.9□□□□□ -0.18
TNFAIP3-202ENST00000420009 EIF5P55010 431 aaKnown RBP13.9□□□□□ -0.18
TNFAIP3-202ENST00000420009 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-202ENST00000420009 MTHFSDQ2M296 383 aaKnown RBP13.89□□□□□ -0.19
TNFAIP3-202ENST00000420009 KNSTRNQ9Y448 316 aa13.89□□□□□ -0.19
TNFAIP3-202ENST00000420009 HMOX1P09601 288 aa13.88□□□□□ -0.19
TNFAIP3-202ENST00000420009 CANXP27824 592 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-202ENST00000420009 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
TNFAIP3-202ENST00000420009 CCDC88AQ3V6T2 1871 aa13.88□□□□□ -0.19
TNFAIP3-202ENST00000420009 LTBP3Q9NS15 1303 aa13.88□□□□□ -0.19
TNFAIP3-202ENST00000420009 HAX1O00165 279 aa13.87□□□□□ -0.19
TNFAIP3-202ENST00000420009 TBC1D9BQ66K14 1250 aa13.87□□□□□ -0.19
TNFAIP3-202ENST00000420009 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
TNFAIP3-202ENST00000420009 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
TNFAIP3-202ENST00000420009 DICER1Q9UPY3 1922 aaKnown RBP13.87□□□□□ -0.19
TNFAIP3-202ENST00000420009 A0A087WZG4 1122 aa13.86□□□□□ -0.19
TNFAIP3-202ENST00000420009 STARD3NLO95772 234 aa13.86□□□□□ -0.19
TNFAIP3-202ENST00000420009 PRR5LQ6MZQ0 368 aa13.86□□□□□ -0.19
TNFAIP3-202ENST00000420009 DPY19L2Q6NUT2 758 aa13.86□□□□□ -0.19
TNFAIP3-202ENST00000420009 BICDL1Q6ZP65 573 aa13.86□□□□□ -0.19
TNFAIP3-202ENST00000420009 HEG1Q9ULI3 1381 aa13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 C21orf2O43822 256 aa13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 PDE6BP35913 854 aa13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 ERFEQ4G0M1 354 aa13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 ZNF622Q969S3 477 aaKnown RBP eCLIP13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 ZNF496Q96IT1 587 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 CREBZFQ9NS37 354 aa13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 SIPA1L3O60292 1781 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 COL3A1P02461 1466 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-202ENST00000420009 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms