RNA–Protein interactions for RNA: ENST00000419314.5

CCT6P3-201, Transcript of chaperonin containing TCP1 subunit 6 pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CCT6P3, Length 3,702 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT6P3-201ENST00000419314 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 ZCRB1Q8TBF4 217 aaKnown RBP16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 FMNL2Q96PY5 1086 aa16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 ST18O60284 1047 aa16.92■□□□□ 0.3
CCT6P3-201ENST00000419314 SLC52A2Q9HAB3 445 aa16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 NUTM2BA6NNL0 878 aaPredicted RBP16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 NUTM2EB1AL46 878 aaPredicted RBP16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 PHKG2P15735 406 aa16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 NUTM2AQ8IVF1 878 aaPredicted RBP16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 USP16Q9Y5T5 823 aa16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 AKAP12Q02952 1782 aa16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
CCT6P3-201ENST00000419314 ADAMTS2O95450 1211 aa16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 SNRPA1P09661 255 aaKnown RBP16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 LARP1Q6PKG0 1096 aaKnown RBP16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 KIF1BPQ96EK5 621 aa16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 DIAPH3Q9NSV4 1193 aa16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
CCT6P3-201ENST00000419314 NEK4P51957 841 aa16.89■□□□□ 0.29
CCT6P3-201ENST00000419314 GSE1Q14687 1217 aa16.89■□□□□ 0.29
CCT6P3-201ENST00000419314 AACSQ86V21 672 aa16.89■□□□□ 0.29
CCT6P3-201ENST00000419314 DDX21Q9NR30 783 aaKnown RBP eCLIP16.89■□□□□ 0.29
CCT6P3-201ENST00000419314 PEAK1Q9H792 1746 aa16.89■□□□□ 0.29
CCT6P3-201ENST00000419314 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
CCT6P3-201ENST00000419314 CCDC8Q9H0W5 538 aaPredicted RBP16.88■□□□□ 0.29
CCT6P3-201ENST00000419314 HOXB7P09629 217 aa16.88■□□□□ 0.29
CCT6P3-201ENST00000419314 PIP4K2BP78356 416 aa16.88■□□□□ 0.29
CCT6P3-201ENST00000419314 ZBTB3Q9H5J0 574 aa16.88■□□□□ 0.29
CCT6P3-201ENST00000419314 GOLGA6L22H0YM25 854 aa16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 BEND3Q5T5X7 828 aa16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 UBE3BQ7Z3V4 1068 aa16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 CCDC85AQ96PX6 553 aaPredicted RBP16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 GRM8O00222 908 aa16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 CWC27Q6UX04 472 aaKnown RBP16.87■□□□□ 0.29
CCT6P3-201ENST00000419314 CYP27B1O15528 508 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 FOXD4L6Q3SYB3 417 aaPredicted RBP16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 FOXD4L3Q6VB84 417 aaPredicted RBP16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 KLHDC4Q8TBB5 520 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 K7ELQ4 463 aaPredicted RBP16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 RABEP1Q15276 862 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 LINS1Q8NG48 757 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 A0A087WZG4 1122 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 CNTROBQ8N137 903 aa16.86■□□□□ 0.29
CCT6P3-201ENST00000419314 RAB11FIP3O75154 756 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 TAF7LQ5H9L4 462 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 PIK3C2AO00443 1686 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 IL2RBP14784 551 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 UPF3BQ9BZI7 483 aaKnown RBP16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 BTG4Q9NY30 223 aa16.85■□□□□ 0.29
CCT6P3-201ENST00000419314 TMOD3Q9NYL9 352 aa16.84■□□□□ 0.29
CCT6P3-201ENST00000419314 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
CCT6P3-201ENST00000419314 RTN4Q9NQC3 1192 aaKnown RBP16.84■□□□□ 0.29
CCT6P3-201ENST00000419314 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
CCT6P3-201ENST00000419314 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
CCT6P3-201ENST00000419314 ALDH1L1O75891 902 aa16.83■□□□□ 0.29
CCT6P3-201ENST00000419314 NRKQ7Z2Y5 1582 aa16.83■□□□□ 0.29
CCT6P3-201ENST00000419314 A1BGP04217 495 aa16.83■□□□□ 0.28
CCT6P3-201ENST00000419314 RBM25P49756 843 aaKnown RBP16.83■□□□□ 0.28
CCT6P3-201ENST00000419314 BOLA2Q9H3K6 86 aa16.83■□□□□ 0.28
CCT6P3-201ENST00000419314 SUCLG2Q96I99 432 aa16.83■□□□□ 0.28
CCT6P3-201ENST00000419314 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 GORABQ5T7V8 394 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 SSH3Q8TE77 659 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 USP26Q9BXU7 913 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 ERC1Q8IUD2 1116 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
CCT6P3-201ENST00000419314 RGS12O14924 1447 aa16.81■□□□□ 0.28
CCT6P3-201ENST00000419314 ATP10DQ9P241 1426 aa16.81■□□□□ 0.28
CCT6P3-201ENST00000419314 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
CCT6P3-201ENST00000419314 DNAJC2Q99543 621 aaKnown RBP16.8■□□□□ 0.28
CCT6P3-201ENST00000419314 UNC5CLQ8IV45 518 aa16.8■□□□□ 0.28
CCT6P3-201ENST00000419314 CD2BP2O95400 341 aaKnown RBP16.8■□□□□ 0.28
CCT6P3-201ENST00000419314 LARP6Q9BRS8 491 aaKnown RBP16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 ESYT1Q9BSJ8 1104 aa16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 GLRX3O76003 335 aaKnown RBP16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 MCM4P33991 863 aa16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 FMN2Q9NZ56 1722 aa16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 FGD1P98174 961 aa16.79■□□□□ 0.28
CCT6P3-201ENST00000419314 TOPAZ1Q8N9V7 1692 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 MST1RQ04912 1400 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 PXDNQ92626 1479 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 CHMLP26374 656 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 ECHDC1Q9NTX5 307 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 NAP1L2Q9ULW6 460 aaPredicted RBP16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 KDM4FA0A1W2PPD8 638 aa16.78■□□□□ 0.28
CCT6P3-201ENST00000419314 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.28
CCT6P3-201ENST00000419314 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.28
CCT6P3-201ENST00000419314 TNS3Q68CZ2 1445 aa16.77■□□□□ 0.28
CCT6P3-201ENST00000419314 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
CCT6P3-201ENST00000419314 GPTP24298 496 aa16.77■□□□□ 0.27
CCT6P3-201ENST00000419314 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.279e-7■■□□□ 12.3
CCT6P3-201ENST00000419314 TAOK2Q9UL54 1235 aa16.77■□□□□ 0.27
CCT6P3-201ENST00000419314 NALCNQ8IZF0 1738 aa16.77■□□□□ 0.27
CCT6P3-201ENST00000419314 LMBR1LQ6UX01 489 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms