RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ZMYND15Q9H091 742 aa15.26■□□□□ 0.03
SCAF8-203ENST00000417268 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
SCAF8-203ENST00000417268 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAF8-203ENST00000417268 VPS53Q5VIR6 699 aa15.25■□□□□ 0.03
SCAF8-203ENST00000417268 BICD2Q8TD16 824 aa15.25■□□□□ 0.03
SCAF8-203ENST00000417268 TSPY26PQ9H489 355 aa15.25■□□□□ 0.03
SCAF8-203ENST00000417268 NACAP1Q9BZK3 213 aa15.25■□□□□ 0.03
SCAF8-203ENST00000417268 DDX17Q92841 729 aaKnown RBP15.25■□□□□ 0.03
SCAF8-203ENST00000417268 SMC3Q9UQE7 1217 aa15.25■□□□□ 0.03
SCAF8-203ENST00000417268 IQGAP3Q86VI3 1631 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 ANXA1P04083 346 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 IFIT1P09914 478 aaKnown RBP15.24■□□□□ 0.03
SCAF8-203ENST00000417268 CREBRFQ8IUR6 639 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 ROBO2Q9HCK4 1378 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 CCDC66A2RUB6 948 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 ATP6V1AP38606 617 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 PPP1R42Q7Z4L9 355 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 C8orf58Q8NAV2 365 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 CHPF2Q9P2E5 772 aa15.24■□□□□ 0.03
SCAF8-203ENST00000417268 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
SCAF8-203ENST00000417268 KIF1BO60333 1816 aa15.23■□□□□ 0.03
SCAF8-203ENST00000417268 RFC4P35249 363 aa15.23■□□□□ 0.03
SCAF8-203ENST00000417268 ANKRD18BA2A2Z9 1011 aa15.23■□□□□ 0.03
SCAF8-203ENST00000417268 ATP5J2-PTCD1G3V325 749 aa15.23■□□□□ 0.03
SCAF8-203ENST00000417268 RNMTO43148 476 aaKnown RBP15.23■□□□□ 0.03
SCAF8-203ENST00000417268 GLRX3O76003 335 aaKnown RBP15.23■□□□□ 0.03
SCAF8-203ENST00000417268 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
SCAF8-203ENST00000417268 SASS6Q6UVJ0 657 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 XAGE3Q8WTP9 111 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 SETQ01105 290 aaPredicted RBP15.22■□□□□ 0.03
SCAF8-203ENST00000417268 COPS6Q7L5N1 327 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
SCAF8-203ENST00000417268 RABEP1Q15276 862 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 UBE3BQ7Z3V4 1068 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 CDC42BPBQ9Y5S2 1711 aa15.22■□□□□ 0.03
SCAF8-203ENST00000417268 ARGLU1Q9NWB6 273 aaPredicted RBP15.21■□□□□ 0.03
SCAF8-203ENST00000417268 BABAM1Q9NWV8 329 aa15.21■□□□□ 0.03
SCAF8-203ENST00000417268 K7ELQ4 463 aaPredicted RBP15.21■□□□□ 0.03
SCAF8-203ENST00000417268 CLSTN1O94985 981 aa15.21■□□□□ 0.03
SCAF8-203ENST00000417268 MCM2P49736 904 aa15.21■□□□□ 0.03
SCAF8-203ENST00000417268 CIZ1Q9ULV3 898 aaPredicted RBP15.21■□□□□ 0.03
SCAF8-203ENST00000417268 CAVIN4Q5BKX8 364 aa15.21■□□□□ 0.02
SCAF8-203ENST00000417268 PDCL3Q9H2J4 239 aa15.21■□□□□ 0.02
SCAF8-203ENST00000417268 LRP2BPQ9P2M1 347 aa15.21■□□□□ 0.02
SCAF8-203ENST00000417268 A2ML1A8K2U0 1454 aa15.21■□□□□ 0.02
SCAF8-203ENST00000417268 MX1P20591 662 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 SAFBQ15424 915 aaKnown RBP eCLIP15.2■□□□□ 0.02
SCAF8-203ENST00000417268 NEK4P51957 841 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 NUTM1Q86Y26 1132 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 RPGRQ92834 1020 aaKnown RBP15.2■□□□□ 0.02
SCAF8-203ENST00000417268 ALDH1L1O75891 902 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 TPD52L1Q16890 204 aaPredicted RBP15.2■□□□□ 0.02
SCAF8-203ENST00000417268 KSR2Q6VAB6 950 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 MNS1Q8NEH6 495 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 KDM5CP41229 1560 aa15.2■□□□□ 0.02
SCAF8-203ENST00000417268 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
SCAF8-203ENST00000417268 RAI14Q9P0K7 980 aa15.19■□□□□ 0.02
SCAF8-203ENST00000417268 MAP4K4O95819 1239 aaPredicted RBP15.19■□□□□ 0.02
SCAF8-203ENST00000417268 VAMP4O75379 141 aa15.19■□□□□ 0.02
SCAF8-203ENST00000417268 IDH1O75874 414 aaKnown RBP15.18■□□□□ 0.02
SCAF8-203ENST00000417268 NBPF6Q5VWK0 638 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 NBPF4Q96M43 638 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 TRIM5Q9C035 493 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 CTNNA3Q9UI47 895 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 MRPL50Q8N5N7 158 aaKnown RBP15.18■□□□□ 0.02
SCAF8-203ENST00000417268 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.18■□□□□ 0.02
SCAF8-203ENST00000417268 UNC13BO14795 1591 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 KDM5AP29375 1690 aaKnown RBP15.18■□□□□ 0.02
SCAF8-203ENST00000417268 LDHAL6AQ6ZMR3 332 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 ANKIB1Q9P2G1 1089 aa15.18■□□□□ 0.02
SCAF8-203ENST00000417268 SPC24Q8NBT2 197 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 PRDM10Q9NQV6 1147 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 ABCF2Q9UG63 623 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
SCAF8-203ENST00000417268 KAT6BQ8WYB5 2073 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 SLC5A1P13866 664 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 NBPF5PQ86XG9 351 aaPredicted RBP15.17■□□□□ 0.02
SCAF8-203ENST00000417268 LETM1O95202 739 aaPredicted RBP15.17■□□□□ 0.02
SCAF8-203ENST00000417268 XBP1P17861 261 aa15.17■□□□□ 0.02
SCAF8-203ENST00000417268 ATP7BP35670 1465 aa15.16■□□□□ 0.02
SCAF8-203ENST00000417268 DDX46Q7L014 1031 aaKnown RBP15.16■□□□□ 0.02
SCAF8-203ENST00000417268 LINS1Q8NG48 757 aa15.16■□□□□ 0.02
SCAF8-203ENST00000417268 CWC22Q9HCG8 908 aaKnown RBP15.16■□□□□ 0.02
SCAF8-203ENST00000417268 CYP46A1Q9Y6A2 500 aa15.16■□□□□ 0.02
SCAF8-203ENST00000417268 SMARCA5O60264 1052 aaPredicted RBP15.16■□□□□ 0.02
SCAF8-203ENST00000417268 RBM5P52756 815 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCAF8-203ENST00000417268 CWC27Q6UX04 472 aaKnown RBP15.16■□□□□ 0.02
SCAF8-203ENST00000417268 TBC1D2Q9BYX2 928 aa15.16■□□□□ 0.02
SCAF8-203ENST00000417268 MAP3K4Q9Y6R4 1608 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 ZNF790Q6PG37 636 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 SETDB2Q96T68 719 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 TSPYL6Q8N831 410 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 ZNF335Q9H4Z2 1342 aaPredicted RBP15.15■□□□□ 0.02
SCAF8-203ENST00000417268 GRM8O00222 908 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 HOXB7P09629 217 aa15.15■□□□□ 0.02
SCAF8-203ENST00000417268 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
SCAF8-203ENST00000417268 RNF17Q9BXT8 1623 aaKnown RBP15.14■□□□□ 0.01
SCAF8-203ENST00000417268 BOLA2Q9H3K6 86 aa15.14■□□□□ 0.01
SCAF8-203ENST00000417268 SPINK5Q9NQ38 1064 aaPredicted RBP15.14■□□□□ 0.01
SCAF8-203ENST00000417268 DDX21Q9NR30 783 aaKnown RBP eCLIP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms