RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PLEKHG1Q9ULL1 1385 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 HDGFL1Q5TGJ6 251 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 PATL2C9JE40 543 aaKnown RBP9.33□□□□□ -0.92
SIK3-203ENST00000415541 ADCY5O95622 1261 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 TATP17735 454 aaPredicted RBP9.33□□□□□ -0.92
SIK3-203ENST00000415541 PLCB2Q00722 1185 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 KIF18AQ8NI77 898 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 CHMP3Q9Y3E7 222 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 IL13P35225 146 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 MVPQ14764 893 aaKnown RBP9.33□□□□□ -0.92
SIK3-203ENST00000415541 TMEM63CQ9P1W3 806 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 CAMSAP1Q5T5Y3 1602 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 ZFYVE9O95405 1425 aa9.33□□□□□ -0.92
SIK3-203ENST00000415541 ST18O60284 1047 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 HMMRO75330 724 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 NCBP1Q09161 790 aaKnown RBP9.32□□□□□ -0.92
SIK3-203ENST00000415541 TXLNBQ8N3L3 684 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 TSPYL6Q8N831 410 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 SIRT1Q96EB6 747 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 EDC4Q6P2E9 1401 aaKnown RBP9.32□□□□□ -0.92
SIK3-203ENST00000415541 GLI2P10070 1586 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 GCP02774 474 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 RNF20Q5VTR2 975 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 GPT2Q8TD30 523 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 TRIM27P14373 513 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 CNPY4Q8N129 248 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 BANK1Q8NDB2 785 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 IFT57Q9NWB7 429 aa9.32□□□□□ -0.92
SIK3-203ENST00000415541 PSEN1P49768 467 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 HDAC1Q13547 482 aaPredicted RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 BMS1Q14692 1282 aaKnown RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 MTHFSDQ2M296 383 aaKnown RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 MPNDQ8N594 471 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 C8orf58Q8NAV2 365 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 ANKRD24Q8TF21 1146 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 NCAPGQ9BPX3 1015 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 USP25Q9UHP3 1055 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 CLTCQ00610 1675 aaKnown RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 HNRNPH2P55795 449 aaKnown RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 KIAA1524Q8TCG1 905 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 C9orf78Q9NZ63 289 aaPredicted RBP9.31□□□□□ -0.92
SIK3-203ENST00000415541 TRIM35Q9UPQ4 493 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 F6X3S4 739 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 REC8O95072 547 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 CCDC30Q5VVM6 783 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 ICE2Q659A1 982 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 HOMEZQ8IX15 550 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 ALKQ9UM73 1620 aa9.31□□□□□ -0.92
SIK3-203ENST00000415541 IQSEC2Q5JU85 1478 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 LOC102724159A0A0B4J2E5 919 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 CT47B1P0C2W7 299 aaPredicted RBP9.3□□□□□ -0.92
SIK3-203ENST00000415541 RLBP1P12271 317 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 TPM4P67936 248 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 PWP2Q15269 919 aaKnown RBP9.3□□□□□ -0.92
SIK3-203ENST00000415541 CASC1Q6TDU7 716 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 C17orf53Q8N3J3 647 aaPredicted RBP9.3□□□□□ -0.92
SIK3-203ENST00000415541 SETBP1Q9Y6X0 1596 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 RAD51AP2Q09MP3 1159 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 DEF6Q9H4E7 631 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 ADGRB1O14514 1584 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 MYCNP04198 464 aaPredicted RBP9.3□□□□□ -0.92
SIK3-203ENST00000415541 HOXC9P31274 260 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 BMP2KLQ5H9B9 411 aa9.3□□□□□ -0.92
SIK3-203ENST00000415541 CYP2C19P33261 490 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 CCDC27Q2M243 656 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 ZBTB9Q96C00 473 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 PPLO60437 1756 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 MSH6P52701 1360 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 NPHP1O15259 732 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 ANXA1P04083 346 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 CASQ1P31415 396 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 TAF7Q15545 349 aaPredicted RBP9.29□□□□□ -0.92
SIK3-203ENST00000415541 QRICH2Q9H0J4 1663 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 KAT6BQ8WYB5 2073 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 FLT4P35916 1363 aa9.29□□□□□ -0.92
SIK3-203ENST00000415541 DHX16O60231 1041 aaKnown RBP9.28□□□□□ -0.92
SIK3-203ENST00000415541 MYL6BP14649 208 aa9.28□□□□□ -0.92
SIK3-203ENST00000415541 SAMD1Q6SPF0 538 aaPredicted RBP9.28□□□□□ -0.92
SIK3-203ENST00000415541 NEXMIFQ5QGS0 1516 aa9.28□□□□□ -0.92
SIK3-203ENST00000415541 CYP2E1P05181 493 aaPredicted RBP9.28□□□□□ -0.92
SIK3-203ENST00000415541 TNNT1P13805 278 aa9.28□□□□□ -0.92
SIK3-203ENST00000415541 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
SIK3-203ENST00000415541 NPHP3Q7Z494 1330 aa9.28□□□□□ -0.92
SIK3-203ENST00000415541 AGLP35573 1532 aa9.27□□□□□ -0.92
SIK3-203ENST00000415541 USP32Q8NFA0 1604 aa9.27□□□□□ -0.92
SIK3-203ENST00000415541 KDM4AO75164 1064 aa9.27□□□□□ -0.92
SIK3-203ENST00000415541 CEP120Q8N960 986 aa9.27□□□□□ -0.92
SIK3-203ENST00000415541 SPG7Q9UQ90 795 aa9.27□□□□□ -0.92
SIK3-203ENST00000415541 PIK3C2BO00750 1634 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 PTCD1O75127 700 aaKnown RBP9.27□□□□□ -0.93
SIK3-203ENST00000415541 CABP4P57796 275 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 MNS1Q8NEH6 495 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 CHMP4CQ96CF2 233 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 PHF23Q9BUL5 403 aaPredicted RBP9.27□□□□□ -0.93
SIK3-203ENST00000415541 CDC45O75419 566 aa9.27□□□□□ -0.93
SIK3-203ENST00000415541 CALRP27797 417 aaKnown RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms