RNA–Protein interactions for RNA: ENST00000415220.6

PRKD1-202, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-202ENST00000415220 MED1Q15648 1581 aaPredicted RBP17.89■□□□□ 0.45
PRKD1-202ENST00000415220 CWC22Q9HCG8 908 aaKnown RBP17.89■□□□□ 0.45
PRKD1-202ENST00000415220 ISY1Q9ULR0 285 aaKnown RBP17.89■□□□□ 0.45
PRKD1-202ENST00000415220 KDM3BQ7LBC6 1761 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 SRGAP3O43295 1099 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 ZSCAN23Q3MJ62 389 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 ESCO1Q5FWF5 840 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 SRCIN1Q9C0H9 1055 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 PXDNQ92626 1479 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 PI4K2BQ8TCG2 481 aa17.88■□□□□ 0.45
PRKD1-202ENST00000415220 POLA2Q14181 598 aa17.87■□□□□ 0.45
PRKD1-202ENST00000415220 BEND3Q5T5X7 828 aa17.87■□□□□ 0.45
PRKD1-202ENST00000415220 PROSER3Q2NL68 480 aa17.87■□□□□ 0.45
PRKD1-202ENST00000415220 RHPN1Q8TCX5 695 aa17.87■□□□□ 0.45
PRKD1-202ENST00000415220 ADCY9O60503 1353 aa17.86■□□□□ 0.45
PRKD1-202ENST00000415220 CLCN1P35523 988 aa17.86■□□□□ 0.45
PRKD1-202ENST00000415220 FOXD4L6Q3SYB3 417 aaPredicted RBP17.86■□□□□ 0.45
PRKD1-202ENST00000415220 FOXD4L3Q6VB84 417 aaPredicted RBP17.86■□□□□ 0.45
PRKD1-202ENST00000415220 CHD2O14647 1828 aaKnown RBP17.86■□□□□ 0.45
PRKD1-202ENST00000415220 DTNBO60941 627 aa17.86■□□□□ 0.45
PRKD1-202ENST00000415220 NASPP49321 788 aaPredicted RBP17.86■□□□□ 0.45
PRKD1-202ENST00000415220 LARP6Q9BRS8 491 aaKnown RBP17.86■□□□□ 0.45
PRKD1-202ENST00000415220 PSME1Q06323 249 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 ZNF530Q6P9A1 599 aaPredicted RBP17.85■□□□□ 0.45
PRKD1-202ENST00000415220 BABAM1Q9NWV8 329 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 BTBD11A6QL63 1104 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 ESPNB1AK53 854 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 DNAAF4Q8WXU2 420 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 ORAI2Q96SN7 254 aa17.85■□□□□ 0.45
PRKD1-202ENST00000415220 RBSNQ9H1K0 784 aa17.84■□□□□ 0.45
PRKD1-202ENST00000415220 PRIM1P49642 420 aaKnown RBP17.84■□□□□ 0.45
PRKD1-202ENST00000415220 TMEM63CQ9P1W3 806 aa17.84■□□□□ 0.45
PRKD1-202ENST00000415220 ZNF445P59923 1031 aa17.83■□□□□ 0.44
PRKD1-202ENST00000415220 CUL4AQ13619 759 aa17.83■□□□□ 0.44
PRKD1-202ENST00000415220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.83■□□□□ 0.44
PRKD1-202ENST00000415220 LMO7Q8WWI1 1683 aa17.82■□□□□ 0.44
PRKD1-202ENST00000415220 MCCP23508 829 aa17.82■□□□□ 0.44
PRKD1-202ENST00000415220 TEFQ10587 303 aa17.82■□□□□ 0.44
PRKD1-202ENST00000415220 PA2G4Q9UQ80 394 aaKnown RBP17.82■□□□□ 0.44
PRKD1-202ENST00000415220 BRD1O95696 1058 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 CWF19L2Q2TBE0 894 aaKnown RBP17.81■□□□□ 0.44
PRKD1-202ENST00000415220 CPA1P15085 419 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 LMOD2Q6P5Q4 547 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 RASEFQ8IZ41 740 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 TRIM44Q96DX7 344 aaPredicted RBP17.81■□□□□ 0.44
PRKD1-202ENST00000415220 GDPD2Q9HCC8 539 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 SPG7Q9UQ90 795 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 AXIN2Q9Y2T1 843 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 HSPA4P34932 840 aa17.81■□□□□ 0.44
PRKD1-202ENST00000415220 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
PRKD1-202ENST00000415220 AOX1Q06278 1338 aa17.8■□□□□ 0.44
PRKD1-202ENST00000415220 RAB11FIP3O75154 756 aa17.8■□□□□ 0.44
PRKD1-202ENST00000415220 ANAPC15P60006 121 aa17.8■□□□□ 0.44
PRKD1-202ENST00000415220 CWC27Q6UX04 472 aaKnown RBP17.8■□□□□ 0.44
PRKD1-202ENST00000415220 MAP3K2Q9Y2U5 619 aa17.8■□□□□ 0.44
PRKD1-202ENST00000415220 RNMTO43148 476 aaKnown RBP17.79■□□□□ 0.44
PRKD1-202ENST00000415220 KIF1BPQ96EK5 621 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 SYCE3A1L190 88 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 SGSM2O43147 1006 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 SNX14Q9Y5W7 946 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 GCP02774 474 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 NAP1L5Q96NT1 182 aaPredicted RBP17.79■□□□□ 0.44
PRKD1-202ENST00000415220 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
PRKD1-202ENST00000415220 LSG1Q9H089 658 aaKnown RBP17.79■□□□□ 0.44
PRKD1-202ENST00000415220 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.44
PRKD1-202ENST00000415220 ANKLE2Q86XL3 938 aa17.77■□□□□ 0.44
PRKD1-202ENST00000415220 RAD50Q92878 1312 aa17.77■□□□□ 0.44
PRKD1-202ENST00000415220 GADD45BO75293 160 aaPredicted RBP17.77■□□□□ 0.44
PRKD1-202ENST00000415220 ANKRD24Q8TF21 1146 aa17.77■□□□□ 0.44
PRKD1-202ENST00000415220 IL17RAQ96F46 866 aa17.77■□□□□ 0.44
PRKD1-202ENST00000415220 GIGYF1O75420 1035 aaPredicted RBP17.77■□□□□ 0.43
PRKD1-202ENST00000415220 MCM2P49736 904 aa17.77■□□□□ 0.43
PRKD1-202ENST00000415220 OS9Q13438 667 aaPredicted RBP17.77■□□□□ 0.43
PRKD1-202ENST00000415220 ADGRL3Q9HAR2 1447 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 TPRNQ4KMQ1 711 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 PLEKHO1Q53GL0 409 aaPredicted RBP17.76■□□□□ 0.43
PRKD1-202ENST00000415220 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 CRYBG1Q9Y4K1 1723 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 RPAP1Q9BWH6 1393 aaPredicted RBP17.76■□□□□ 0.43
PRKD1-202ENST00000415220 HOXB7P09629 217 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 KCNH5Q8NCM2 988 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 DDX54Q8TDD1 881 aaKnown RBP17.76■□□□□ 0.43
PRKD1-202ENST00000415220 RGPD5Q99666 1765 aa17.76■□□□□ 0.43
PRKD1-202ENST00000415220 TCHHQ07283 1943 aa17.75■□□□□ 0.43
PRKD1-202ENST00000415220 PTH1RQ03431 593 aa17.75■□□□□ 0.43
PRKD1-202ENST00000415220 AIMP1Q12904 312 aaKnown RBP17.75■□□□□ 0.43
PRKD1-202ENST00000415220 COL9A3Q14050 684 aaPredicted RBP17.75■□□□□ 0.43
PRKD1-202ENST00000415220 LARGE1O95461 756 aa17.75■□□□□ 0.43
PRKD1-202ENST00000415220 KAZALD1Q96I82 304 aa17.75■□□□□ 0.43
PRKD1-202ENST00000415220 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
PRKD1-202ENST00000415220 AK2P54819 239 aa17.75■□□□□ 0.43
PRKD1-202ENST00000415220 INTS4Q96HW7 963 aaKnown RBP17.75■□□□□ 0.43
PRKD1-202ENST00000415220 PHRF1Q9P1Y6 1649 aaKnown RBP17.74■□□□□ 0.43
PRKD1-202ENST00000415220 C1orf141Q5JVX7 400 aa17.74■□□□□ 0.43
PRKD1-202ENST00000415220 CNTROBQ8N137 903 aa17.74■□□□□ 0.43
PRKD1-202ENST00000415220 TTC14Q96N46 770 aa17.74■□□□□ 0.43
PRKD1-202ENST00000415220 C9orf78Q9NZ63 289 aaPredicted RBP17.74■□□□□ 0.43
PRKD1-202ENST00000415220 RUFY3Q7L099 469 aa17.74■□□□□ 0.43
PRKD1-202ENST00000415220 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
PRKD1-202ENST00000415220 ADCK5Q3MIX3 580 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms