RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 UBAP1LF5GYI3 381 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 KSR2Q6VAB6 950 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 GLI2P10070 1586 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 HOXC9P31274 260 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 STK38Q15208 465 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 RRP12Q5JTH9 1297 aaKnown RBP14.16□□□□□ -0.14
PTPRF-205ENST00000414879 NOC3LQ8WTT2 800 aaKnown RBP14.16□□□□□ -0.14
PTPRF-205ENST00000414879 PTPRTO14522 1441 aa14.16□□□□□ -0.14
PTPRF-205ENST00000414879 AK7Q96M32 723 aa14.15□□□□□ -0.14
PTPRF-205ENST00000414879 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-205ENST00000414879 DACH1Q9UI36 760 aa14.15□□□□□ -0.14
PTPRF-205ENST00000414879 FOXD4L6Q3SYB3 417 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-205ENST00000414879 CWC27Q6UX04 472 aaKnown RBP14.15□□□□□ -0.14
PTPRF-205ENST00000414879 FOXD4L3Q6VB84 417 aaPredicted RBP14.15□□□□□ -0.14
PTPRF-205ENST00000414879 ARHGAP31Q2M1Z3 1444 aa14.15□□□□□ -0.14
PTPRF-205ENST00000414879 PI4KAP2A4QPH2 592 aa14.15□□□□□ -0.15
PTPRF-205ENST00000414879 DDB1Q16531 1140 aa14.15□□□□□ -0.15
PTPRF-205ENST00000414879 PI4KAP1Q8N8J0 262 aa14.15□□□□□ -0.15
PTPRF-205ENST00000414879 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.15
PTPRF-205ENST00000414879 NFKBIBQ15653 356 aa14.14□□□□□ -0.15
PTPRF-205ENST00000414879 IDH1O75874 414 aaKnown RBP14.14□□□□□ -0.15
PTPRF-205ENST00000414879 LINS1Q8NG48 757 aa14.14□□□□□ -0.15
PTPRF-205ENST00000414879 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
PTPRF-205ENST00000414879 MAP3K19Q56UN5 1328 aa14.14□□□□□ -0.15
PTPRF-205ENST00000414879 ZFYP08048 801 aaPredicted RBP14.14□□□□□ -0.15
PTPRF-205ENST00000414879 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 HMG20BQ9P0W2 317 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 MRPL50Q8N5N7 158 aaKnown RBP14.13□□□□□ -0.15
PTPRF-205ENST00000414879 LARP1BQ659C4 914 aaKnown RBP14.13□□□□□ -0.15
PTPRF-205ENST00000414879 CDK5RAP3Q96JB5 506 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 YEATS2Q9ULM3 1422 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 ANKRD44Q8N8A2 993 aa14.13□□□□□ -0.15
PTPRF-205ENST00000414879 KDM5AP29375 1690 aaKnown RBP14.13□□□□□ -0.15
PTPRF-205ENST00000414879 F6X3S4 739 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 EYA1Q99502 592 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 RSPH6AQ9H0K4 717 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
PTPRF-205ENST00000414879 DDX46Q7L014 1031 aaKnown RBP14.12□□□□□ -0.15
PTPRF-205ENST00000414879 GOLGA6L1Q8N7Z2 621 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 PCMTD1Q96MG8 357 aaPredicted RBP14.12□□□□□ -0.15
PTPRF-205ENST00000414879 FAM13BQ9NYF5 915 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 CEP131Q9UPN4 1083 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
PTPRF-205ENST00000414879 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 PPP4R3BQ5MIZ7 849 aa14.12□□□□□ -0.15
PTPRF-205ENST00000414879 TRAK2O60296 914 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 BICDL1Q6ZP65 573 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 LMTK3Q96Q04 1460 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 RTL1A6NKG5 1358 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 RIMBP3CA6NJZ7 1639 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 RIMBP3BA6NNM3 1639 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 RIMBP3Q9UFD9 1639 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 PRDM15P57071 1507 aaPredicted RBP14.11□□□□□ -0.15
PTPRF-205ENST00000414879 FILIP1LQ4L180 1135 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 LDHAL6AQ6ZMR3 332 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 SPATA31E1Q6ZUB1 1445 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 ZGPATQ8N5A5 531 aaKnown RBP14.11□□□□□ -0.15
PTPRF-205ENST00000414879 NAPBQ9H115 298 aa14.11□□□□□ -0.15
PTPRF-205ENST00000414879 FAM83GA6ND36 823 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 IL15P40933 162 aaPredicted RBP14.1□□□□□ -0.15
PTPRF-205ENST00000414879 ST5P78524 1137 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 ATP8B2P98198 1209 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 GRM8O00222 908 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 CCP110O43303 1012 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 DEPDC5O75140 1603 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 RFC4P35249 363 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 KDM5CP41229 1560 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 CCDC178Q5BJE1 867 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 ZBTB3Q9H5J0 574 aa14.1□□□□□ -0.15
PTPRF-205ENST00000414879 IL13P35225 146 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 GSTO1P78417 241 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 STIM1Q13586 685 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 DZIP1Q86YF9 867 aaKnown RBP14.09□□□□□ -0.15
PTPRF-205ENST00000414879 PHAXQ9H814 394 aaKnown RBP14.09□□□□□ -0.15
PTPRF-205ENST00000414879 RNMTO43148 476 aaKnown RBP14.09□□□□□ -0.15
PTPRF-205ENST00000414879 IQCA1Q86XH1 822 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 ABCF2Q9UG63 623 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 FAM135BQ49AJ0 1406 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 LMTK2Q8IWU2 1503 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 VAMP4O75379 141 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 NUCB1Q02818 461 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 UBE3BQ7Z3V4 1068 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 CCDC39Q9UFE4 941 aa14.09□□□□□ -0.15
PTPRF-205ENST00000414879 BAG3O95817 575 aa14.08□□□□□ -0.15
PTPRF-205ENST00000414879 RBM5P52756 815 aaKnown RBP eCLIP14.08□□□□□ -0.15
PTPRF-205ENST00000414879 KIF24Q5T7B8 1368 aa14.08□□□□□ -0.15
PTPRF-205ENST00000414879 ATP7BP35670 1465 aa14.08□□□□□ -0.15
PTPRF-205ENST00000414879 ERVK-7P63135 1459 aa14.08□□□□□ -0.16
PTPRF-205ENST00000414879 C20orf194Q5TEA3 1177 aa14.08□□□□□ -0.16
PTPRF-205ENST00000414879 CCAR1Q8IX12 1150 aaKnown RBP14.08□□□□□ -0.16
PTPRF-205ENST00000414879 BOLA2Q9H3K6 86 aa14.08□□□□□ -0.16
PTPRF-205ENST00000414879 CCDC192P0DO97 292 aa14.08□□□□□ -0.16
PTPRF-205ENST00000414879 TSPY26PQ9H489 355 aa14.08□□□□□ -0.16
PTPRF-205ENST00000414879 CHPF2Q9P2E5 772 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms