RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CERKQ8TCT0 537 aa10.85□□□□□ -0.67
HMGN1P34-201ENST00000413023 DNAAF4Q8WXU2 420 aa10.85□□□□□ -0.67
HMGN1P34-201ENST00000413023 PIGBQ92521 554 aa10.85□□□□□ -0.67
HMGN1P34-201ENST00000413023 MAP3K2Q9Y2U5 619 aa10.85□□□□□ -0.67
HMGN1P34-201ENST00000413023 SPATA31A1Q5TZJ5 1347 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 NBPF7P0C2Y1 421 aaPredicted RBP10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 AIMP1Q12904 312 aaKnown RBP10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 FAM161AQ3B820 660 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 COPS6Q7L5N1 327 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 XAGE3Q8WTP9 111 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 FMNL2Q96PY5 1086 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 LNPKQ9C0E8 428 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 ATG3Q9NT62 314 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 HYPKQ9NX55 129 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 ASAP1Q9ULH1 1129 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 LRRFIP2Q9Y608 721 aaKnown RBP10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 COL14A1Q05707 1796 aaKnown RBP10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
HMGN1P34-201ENST00000413023 PNMA6EA0A0J9YXQ4 647 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 EXOC5O00471 708 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 A1BGP04217 495 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 MYL6BP14649 208 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 GCC1Q96CN9 775 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 SRCIN1Q9C0H9 1055 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 SHANK3Q9BYB0 1731 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 SPATA31A5Q5VU36 1347 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 SPATA31A7Q8IWB4 1347 aa10.83□□□□□ -0.68
HMGN1P34-201ENST00000413023 VIRMAQ69YN4 1812 aaKnown RBP10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 SMARCA5O60264 1052 aaPredicted RBP10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 GNAI2P04899 355 aa10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 IGKV5-2P06315 115 aa10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 CWF19L2Q2TBE0 894 aaKnown RBP10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 TTC5Q8N0Z6 440 aa10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 OTUD7AQ8TE49 926 aaPredicted RBP10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 GLI3P10071 1580 aa10.82□□□□□ -0.68
HMGN1P34-201ENST00000413023 SLIT2O94813 1529 aa10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 GNAI3P08754 354 aa10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 MARCH10Q8NA82 808 aaPredicted RBP10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 KAZALD1Q96I82 304 aa10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 CHMP4AQ9BY43 222 aa10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 PARP4Q9UKK3 1724 aaKnown RBP10.81□□□□□ -0.68
HMGN1P34-201ENST00000413023 KCPQ6ZWJ8 1503 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 C5P01031 1676 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 ALDH1L1O75891 902 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 PRIM1P49642 420 aaKnown RBP10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 POLA2Q14181 598 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 TTLL7Q6ZT98 887 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 PLEKHM2Q8IWE5 1019 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 TNS2Q63HR2 1409 aa10.8□□□□□ -0.68
HMGN1P34-201ENST00000413023 UBTFL1P0CB47 393 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 HSPA1LP34931 641 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 BARGINQ6ZT62 677 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 ANKRD13DQ6ZTN6 518 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 PPP1R42Q7Z4L9 355 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 DNAJC10Q8IXB1 793 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 SSH3Q8TE77 659 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 JARID2Q92833 1246 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 METTL22Q9BUU2 404 aaPredicted RBP10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 TMOD3Q9NYL9 352 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 THRAP3Q9Y2W1 955 aaKnown RBP10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 PXDNLA1KZ92 1463 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 BCL9LQ86UU0 1499 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 UTYO14607 1347 aa10.79□□□□□ -0.68
HMGN1P34-201ENST00000413023 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 APBB1O00213 710 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 RIC3Q7Z5B4 369 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 FNBP4Q8N3X1 1017 aaPredicted RBP10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 LINS1Q8NG48 757 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 MYD88Q99836 296 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 EXOC6BQ9Y2D4 811 aa10.78□□□□□ -0.68
HMGN1P34-201ENST00000413023 JCADQ9P266 1359 aa10.77□□□□□ -0.68
HMGN1P34-201ENST00000413023 BCL9O00512 1426 aa10.77□□□□□ -0.68
HMGN1P34-201ENST00000413023 NEURL1BA8MQ27 555 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 DDB1Q16531 1140 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 EPHA10Q5JZY3 1008 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 SUCLG2Q96I99 432 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 C8orf37Q96NL8 207 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 CDCA7Q9BWT1 371 aaPredicted RBP10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 NRAPQ86VF7 1730 aa10.77□□□□□ -0.69
HMGN1P34-201ENST00000413023 ATP5J2-PTCD1G3V325 749 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 DDX58O95786 925 aaKnown RBP10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 CASP7P55210 303 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 GCKRQ14397 625 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 VPS72Q15906 364 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 PTF1AQ7RTS3 328 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 PLBD2Q8NHP8 589 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 ACSBG1Q96GR2 724 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 LRP6O75581 1613 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 PLCH1Q4KWH8 1693 aa10.76□□□□□ -0.69
HMGN1P34-201ENST00000413023 GRM8O00222 908 aa10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 KCNQ2O43526 872 aa10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 HMMRO75330 724 aa10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 GSPT1P15170 499 aaKnown RBP10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
HMGN1P34-201ENST00000413023 BCL11AQ9H165 835 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms