RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-203ENST00000412570 SEPT12Q8IYM1 358 aa12.2□□□□□ -0.46
SMPD4-203ENST00000412570 ATG3Q9NT62 314 aa12.2□□□□□ -0.46
SMPD4-203ENST00000412570 SYNE4Q8N205 404 aa12.19□□□□□ -0.46
SMPD4-203ENST00000412570 DNAAF4Q8WXU2 420 aa12.19□□□□□ -0.46
SMPD4-203ENST00000412570 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
SMPD4-203ENST00000412570 TRIM37O94972 964 aa12.19□□□□□ -0.46
SMPD4-203ENST00000412570 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-203ENST00000412570 PA2G4Q9UQ80 394 aaKnown RBP12.19□□□□□ -0.46
SMPD4-203ENST00000412570 PHRF1Q9P1Y6 1649 aaKnown RBP12.19□□□□□ -0.46
SMPD4-203ENST00000412570 MS4A1P11836 297 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 WWC3Q9ULE0 1092 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 NBPF26B4DH59 902 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 NPHP1O15259 732 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 CT47B1P0C2W7 299 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-203ENST00000412570 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 NBPF10Q6P3W6 841 aaKnown RBP12.18□□□□□ -0.46
SMPD4-203ENST00000412570 NBPF15Q8N660 670 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 OTUD7AQ8TE49 926 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-203ENST00000412570 ZBTB40Q9NUA8 1239 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
SMPD4-203ENST00000412570 MAP4K4O95819 1239 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-203ENST00000412570 SPATA31A5Q5VU36 1347 aa12.17□□□□□ -0.46
SMPD4-203ENST00000412570 SPATA31A7Q8IWB4 1347 aa12.17□□□□□ -0.46
SMPD4-203ENST00000412570 PNMA6EA0A0J9YXQ4 647 aa12.17□□□□□ -0.46
SMPD4-203ENST00000412570 ANKRD13DQ6ZTN6 518 aa12.17□□□□□ -0.46
SMPD4-203ENST00000412570 CENPQQ7L2Z9 268 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-203ENST00000412570 GJD4Q96KN9 370 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-203ENST00000412570 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
SMPD4-203ENST00000412570 RBM19Q9Y4C8 960 aaKnown RBP12.17□□□□□ -0.46
SMPD4-203ENST00000412570 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
SMPD4-203ENST00000412570 SRGAP3O43295 1099 aa12.16□□□□□ -0.46
SMPD4-203ENST00000412570 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
SMPD4-203ENST00000412570 NEXNQ0ZGT2 675 aa12.16□□□□□ -0.46
SMPD4-203ENST00000412570 RGPD1P0DJD0 1748 aa12.15□□□□□ -0.46
SMPD4-203ENST00000412570 SURF6O75683 361 aaKnown RBP12.15□□□□□ -0.46
SMPD4-203ENST00000412570 LRP6O75581 1613 aa12.15□□□□□ -0.47
SMPD4-203ENST00000412570 A0A087WZG4 1122 aa12.15□□□□□ -0.47
SMPD4-203ENST00000412570 ERICH6BQ5W0A0 696 aa12.15□□□□□ -0.47
SMPD4-203ENST00000412570 FAM89AQ96GI7 184 aa12.15□□□□□ -0.47
SMPD4-203ENST00000412570 DDX21Q9NR30 783 aaKnown RBP eCLIP12.15□□□□□ -0.47
SMPD4-203ENST00000412570 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.15□□□□□ -0.47
SMPD4-203ENST00000412570 PDIA6Q15084 440 aa12.14□□□□□ -0.47
SMPD4-203ENST00000412570 USP44Q9H0E7 712 aa12.14□□□□□ -0.47
SMPD4-203ENST00000412570 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
SMPD4-203ENST00000412570 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
SMPD4-203ENST00000412570 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
SMPD4-203ENST00000412570 GNAI2P04899 355 aa12.13□□□□□ -0.47
SMPD4-203ENST00000412570 HLFQ16534 295 aa12.13□□□□□ -0.47
SMPD4-203ENST00000412570 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
SMPD4-203ENST00000412570 ABCC4O15439 1325 aa12.13□□□□□ -0.47
SMPD4-203ENST00000412570 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 STARD3NLO95772 234 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 SLC4A3P48751 1232 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 SIK1P57059 783 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 HYPKQ9NX55 129 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
SMPD4-203ENST00000412570 ITPK1Q13572 414 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 TRPC5Q9UL62 973 aaPredicted RBP12.12□□□□□ -0.47
SMPD4-203ENST00000412570 PTPRCP08575 1304 aa12.12□□□□□ -0.47
SMPD4-203ENST00000412570 PDE4AP27815 886 aa12.11□□□□□ -0.47
SMPD4-203ENST00000412570 GTF2E1P29083 439 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-203ENST00000412570 VPS72Q15906 364 aa12.11□□□□□ -0.47
SMPD4-203ENST00000412570 CEP85Q6P2H3 762 aa12.11□□□□□ -0.47
SMPD4-203ENST00000412570 ZNF594Q96JF6 807 aaPredicted RBP12.11□□□□□ -0.47
SMPD4-203ENST00000412570 IGKV5-2P06315 115 aa12.11□□□□□ -0.47
SMPD4-203ENST00000412570 COL16A1Q07092 1604 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 NHSL1Q5SYE7 1610 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 BCL9LQ86UU0 1499 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 ADCY9O60503 1353 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 GNPATO15228 680 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 EPHA10Q5JZY3 1008 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 BEND3Q5T5X7 828 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 SUCLG2Q96I99 432 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 SRP68Q9UHB9 627 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 NDUFB9Q9Y6M9 179 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 INTS3Q68E01 1043 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 KIF6Q6ZMV9 814 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 COL18A1P39060 1754 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 KDM2BQ8NHM5 1336 aa12.1□□□□□ -0.47
SMPD4-203ENST00000412570 CRKLP46109 303 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
SMPD4-203ENST00000412570 HCLS1P14317 486 aaPredicted RBP12.09□□□□□ -0.47
SMPD4-203ENST00000412570 SPRYD3Q8NCJ5 442 aa12.09□□□□□ -0.47
SMPD4-203ENST00000412570 RILPL2Q969X0 211 aa12.09□□□□□ -0.47
SMPD4-203ENST00000412570 TRIM6-TRIM34B2RNG4 842 aa12.09□□□□□ -0.47
SMPD4-203ENST00000412570 SEC24BO95487 1268 aa12.09□□□□□ -0.47
SMPD4-203ENST00000412570 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
SMPD4-203ENST00000412570 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
SMPD4-203ENST00000412570 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
SMPD4-203ENST00000412570 PALLDQ8WX93 1383 aa12.08□□□□□ -0.48
SMPD4-203ENST00000412570 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms