RNA–Protein interactions for RNA: ENST00000412446.5

LINC00476-202, long intergenic non-protein coding RNA 476, humanhuman

TSL 1 (best)

Gene LINC00476, Length 809 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00476-202ENST00000412446 ANKRD24Q8TF21 1146 aa11.46□□□□□ -0.57
LINC00476-202ENST00000412446 PCGF6Q9BYE7 350 aa11.46□□□□□ -0.57
LINC00476-202ENST00000412446 NLRP2Q9NX02 1062 aa11.46□□□□□ -0.57
LINC00476-202ENST00000412446 KDM2BQ8NHM5 1336 aa11.45□□□□□ -0.58
LINC00476-202ENST00000412446 PDE4AP27815 886 aa11.45□□□□□ -0.58
LINC00476-202ENST00000412446 C9orf131Q5VYM1 1079 aa11.45□□□□□ -0.58
LINC00476-202ENST00000412446 CRISPLD2Q9H0B8 497 aa11.45□□□□□ -0.58
LINC00476-202ENST00000412446 KIF20BQ96Q89 1820 aa11.44□□□□□ -0.58
LINC00476-202ENST00000412446 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
LINC00476-202ENST00000412446 SBF1O95248 1867 aa11.43□□□□□ -0.58
LINC00476-202ENST00000412446 SLC27A3Q5K4L6 730 aa11.43□□□□□ -0.58
LINC00476-202ENST00000412446 N4BP2Q86UW6 1770 aaPredicted RBP11.43□□□□□ -0.58
LINC00476-202ENST00000412446 LY75O60449 1722 aa11.43□□□□□ -0.58
LINC00476-202ENST00000412446 MAP3K19Q56UN5 1328 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 ZMYND10O75800 440 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 AMPHP49418 695 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 VEGFBP49765 207 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
LINC00476-202ENST00000412446 COL6A3P12111 3177 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 KIF13BQ9NQT8 1826 aa11.42□□□□□ -0.58
LINC00476-202ENST00000412446 HOXC9P31274 260 aa11.41□□□□□ -0.58
LINC00476-202ENST00000412446 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
LINC00476-202ENST00000412446 FLT4P35916 1363 aa11.41□□□□□ -0.58
LINC00476-202ENST00000412446 SMYD5Q6GMV2 418 aa11.4□□□□□ -0.58
LINC00476-202ENST00000412446 DDX27Q96GQ7 796 aaKnown RBP11.4□□□□□ -0.58
LINC00476-202ENST00000412446 ANKRD26Q9UPS8 1709 aa11.4□□□□□ -0.58
LINC00476-202ENST00000412446 INSRP06213 1382 aa11.4□□□□□ -0.59
LINC00476-202ENST00000412446 PITPNM2Q9BZ72 1349 aa11.39□□□□□ -0.59
LINC00476-202ENST00000412446 CAMK2BQ13554 666 aa11.39□□□□□ -0.59
LINC00476-202ENST00000412446 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
LINC00476-202ENST00000412446 FYB1O15117 783 aa11.38□□□□□ -0.59
LINC00476-202ENST00000412446 HABP4Q5JVS0 413 aaKnown RBP11.38□□□□□ -0.59
LINC00476-202ENST00000412446 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
LINC00476-202ENST00000412446 NSD2O96028 1365 aa11.38□□□□□ -0.59
LINC00476-202ENST00000412446 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
LINC00476-202ENST00000412446 PHF12Q96QT6 1004 aa11.37□□□□□ -0.59
LINC00476-202ENST00000412446 BCS1LQ9Y276 419 aa11.37□□□□□ -0.59
LINC00476-202ENST00000412446 CASP8AP2Q9UKL3 1982 aa11.37□□□□□ -0.59
LINC00476-202ENST00000412446 MKI67P46013 3256 aaKnown RBP11.37□□□□□ -0.59
LINC00476-202ENST00000412446 DOT1LQ8TEK3 1739 aa11.37□□□□□ -0.59
LINC00476-202ENST00000412446 PCDH11XQ9BZA7 1347 aa11.36□□□□□ -0.59
LINC00476-202ENST00000412446 PCDH11YQ9BZA8 1340 aa11.36□□□□□ -0.59
LINC00476-202ENST00000412446 NCAPD2Q15021 1401 aa11.36□□□□□ -0.59
LINC00476-202ENST00000412446 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
LINC00476-202ENST00000412446 RAPGEF4Q8WZA2 1011 aa11.36□□□□□ -0.59
LINC00476-202ENST00000412446 NSD3Q9BZ95 1437 aa11.35□□□□□ -0.59
LINC00476-202ENST00000412446 MEGF6O75095 1541 aa11.35□□□□□ -0.59
LINC00476-202ENST00000412446 ADAMTS7Q9UKP4 1686 aa11.35□□□□□ -0.59
LINC00476-202ENST00000412446 VEGFAP15692 232 aaPredicted RBP11.34□□□□□ -0.59
LINC00476-202ENST00000412446 TATP17735 454 aaPredicted RBP11.34□□□□□ -0.59
LINC00476-202ENST00000412446 SMIM5Q71RC9 77 aa11.34□□□□□ -0.59
LINC00476-202ENST00000412446 TMEM106CQ9BVX2 250 aa11.34□□□□□ -0.59
LINC00476-202ENST00000412446 GGNBP2Q9H3C7 697 aa11.34□□□□□ -0.59
LINC00476-202ENST00000412446 RNF181Q9P0P0 153 aa11.34□□□□□ -0.59
LINC00476-202ENST00000412446 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.59
LINC00476-202ENST00000412446 TOGARAM1Q9Y4F4 1720 aa11.33□□□□□ -0.6
LINC00476-202ENST00000412446 POTECB2RU33 542 aa11.33□□□□□ -0.6
LINC00476-202ENST00000412446 FXR1P51114 621 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00476-202ENST00000412446 SOX10P56693 466 aa11.33□□□□□ -0.6
LINC00476-202ENST00000412446 DDX54Q8TDD1 881 aaKnown RBP11.33□□□□□ -0.6
LINC00476-202ENST00000412446 LTV1Q96GA3 475 aaPredicted RBP11.33□□□□□ -0.6
LINC00476-202ENST00000412446 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.33□□□□□ -0.6
LINC00476-202ENST00000412446 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
LINC00476-202ENST00000412446 RRS1Q15050 365 aaKnown RBP11.32□□□□□ -0.6
LINC00476-202ENST00000412446 GCC1Q96CN9 775 aa11.32□□□□□ -0.6
LINC00476-202ENST00000412446 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
LINC00476-202ENST00000412446 LTBP1Q14766 1721 aa11.32□□□□□ -0.6
LINC00476-202ENST00000412446 THSD7BQ9C0I4 1608 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 CD44P16070 742 aaKnown RBP11.31□□□□□ -0.6
LINC00476-202ENST00000412446 EIF4G2P78344 907 aaKnown RBP eCLIP11.31□□□□□ -0.6
LINC00476-202ENST00000412446 NBPF6Q5VWK0 638 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 AMIGO3Q86WK7 504 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 NBPF4Q96M43 638 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 TRPC6Q9Y210 931 aa11.31□□□□□ -0.6
LINC00476-202ENST00000412446 C5P01031 1676 aa11.3□□□□□ -0.6
LINC00476-202ENST00000412446 A0A0G2JLW4 131 aa11.3□□□□□ -0.6
LINC00476-202ENST00000412446 PRIM1P49642 420 aaKnown RBP11.3□□□□□ -0.6
LINC00476-202ENST00000412446 FLAD1Q8NFF5 587 aa11.3□□□□□ -0.6
LINC00476-202ENST00000412446 MLLT3P42568 568 aaPredicted RBP11.29□□□□□ -0.6
LINC00476-202ENST00000412446 HSP90AB2PQ58FF8 381 aa11.29□□□□□ -0.6
LINC00476-202ENST00000412446 RBM26Q5T8P6 1007 aaKnown RBP11.29□□□□□ -0.6
LINC00476-202ENST00000412446 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
LINC00476-202ENST00000412446 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
LINC00476-202ENST00000412446 CARD14Q9BXL6 1004 aa11.29□□□□□ -0.6
LINC00476-202ENST00000412446 SPG7Q9UQ90 795 aa11.29□□□□□ -0.6
LINC00476-202ENST00000412446 MAP2P11137 1827 aaKnown RBP11.29□□□□□ -0.6
LINC00476-202ENST00000412446 TAF1LQ8IZX4 1826 aa11.29□□□□□ -0.6
LINC00476-202ENST00000412446 PASKQ96RG2 1323 aa11.29□□□□□ -0.6
LINC00476-202ENST00000412446 FCHSD2O94868 740 aa11.28□□□□□ -0.6
LINC00476-202ENST00000412446 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
LINC00476-202ENST00000412446 CCNL1Q9UK58 526 aaPredicted RBP11.28□□□□□ -0.6
LINC00476-202ENST00000412446 TRIOBPQ9H2D6 2365 aa11.27□□□□□ -0.6
LINC00476-202ENST00000412446 GLTPD2A6NH11 291 aa11.27□□□□□ -0.61
LINC00476-202ENST00000412446 POTEIP0CG38 1075 aa11.27□□□□□ -0.61
LINC00476-202ENST00000412446 POTEJP0CG39 1038 aa11.27□□□□□ -0.61
LINC00476-202ENST00000412446 MKRN3Q13064 507 aaKnown RBP11.27□□□□□ -0.61
LINC00476-202ENST00000412446 TSKSQ9UJT2 592 aa11.27□□□□□ -0.61
LINC00476-202ENST00000412446 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
LINC00476-202ENST00000412446 KDM6AO15550 1401 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms