RNA–Protein interactions for RNA: ENST00000411850.5

TOM1-204, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TOM1, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-204ENST00000411850 UNC5CLQ8IV45 518 aa20.55■□□□□ 0.88
TOM1-204ENST00000411850 ORAI2Q96SN7 254 aa20.55■□□□□ 0.88
TOM1-204ENST00000411850 USHBP1Q8N6Y0 703 aa20.54■□□□□ 0.88
TOM1-204ENST00000411850 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
TOM1-204ENST00000411850 EIF4A1P60842 406 aaKnown RBP20.54■□□□□ 0.88
TOM1-204ENST00000411850 PPP1R42Q7Z4L9 355 aa20.54■□□□□ 0.88
TOM1-204ENST00000411850 ANP32BQ92688 251 aaKnown RBP20.54■□□□□ 0.88
TOM1-204ENST00000411850 GPT2Q8TD30 523 aa20.53■□□□□ 0.88
TOM1-204ENST00000411850 KDM3BQ7LBC6 1761 aa20.53■□□□□ 0.88
TOM1-204ENST00000411850 BRD1O95696 1058 aa20.53■□□□□ 0.88
TOM1-204ENST00000411850 C19orf44Q9H6X5 657 aa20.53■□□□□ 0.88
TOM1-204ENST00000411850 IL1RAPL2Q9NP60 686 aa20.52■□□□□ 0.88
TOM1-204ENST00000411850 SURF6O75683 361 aaKnown RBP20.52■□□□□ 0.88
TOM1-204ENST00000411850 PHRF1Q9P1Y6 1649 aaKnown RBP20.52■□□□□ 0.88
TOM1-204ENST00000411850 C1orf167Q5SNV9 1468 aa20.52■□□□□ 0.87
TOM1-204ENST00000411850 KIF1AQ12756 1690 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 RHPN1Q8TCX5 695 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 HSPA4P34932 840 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 NBPF6Q5VWK0 638 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 KCNH5Q8NCM2 988 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 PI4K2BQ8TCG2 481 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 KIF1BPQ96EK5 621 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 NBPF4Q96M43 638 aa20.51■□□□□ 0.87
TOM1-204ENST00000411850 STRCP1A6NGW2 1772 aa20.5■□□□□ 0.87
TOM1-204ENST00000411850 TRPM3Q9HCF6 1732 aaPredicted RBP20.5■□□□□ 0.87
TOM1-204ENST00000411850 BEND3Q5T5X7 828 aa20.5■□□□□ 0.87
TOM1-204ENST00000411850 NUTM1Q86Y26 1132 aa20.5■□□□□ 0.87
TOM1-204ENST00000411850 DNAAF4Q8WXU2 420 aa20.5■□□□□ 0.87
TOM1-204ENST00000411850 LGR6Q9HBX8 967 aa20.5■□□□□ 0.87
TOM1-204ENST00000411850 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
TOM1-204ENST00000411850 EIF2S2P20042 333 aaKnown RBP20.49■□□□□ 0.87
TOM1-204ENST00000411850 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
TOM1-204ENST00000411850 SRGAP3O43295 1099 aa20.49■□□□□ 0.87
TOM1-204ENST00000411850 MBD3O95983 291 aa20.49■□□□□ 0.87
TOM1-204ENST00000411850 SLIT3O75094 1523 aa20.48■□□□□ 0.87
TOM1-204ENST00000411850 HSP90AB4PQ58FF6 505 aa20.48■□□□□ 0.87
TOM1-204ENST00000411850 IL25Q9H293 177 aa20.48■□□□□ 0.87
TOM1-204ENST00000411850 NBPF7P0C2Y1 421 aaPredicted RBP20.48■□□□□ 0.87
TOM1-204ENST00000411850 PI4KAP2A4QPH2 592 aa20.47■□□□□ 0.87
TOM1-204ENST00000411850 AKAP4Q5JQC9 854 aa20.47■□□□□ 0.87
TOM1-204ENST00000411850 PI4KAP1Q8N8J0 262 aa20.47■□□□□ 0.87
TOM1-204ENST00000411850 RBSNQ9H1K0 784 aa20.47■□□□□ 0.87
TOM1-204ENST00000411850 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
TOM1-204ENST00000411850 DCCP43146 1447 aa20.47■□□□□ 0.87
TOM1-204ENST00000411850 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 SGSM2O43147 1006 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 PLEKHG5O94827 1062 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 PRIM1P49642 420 aaKnown RBP20.46■□□□□ 0.87
TOM1-204ENST00000411850 RBM27Q9P2N5 1060 aaKnown RBP20.46■□□□□ 0.87
TOM1-204ENST00000411850 RAD50Q92878 1312 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
TOM1-204ENST00000411850 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
TOM1-204ENST00000411850 TMEM63CQ9P1W3 806 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 MST1RQ04912 1400 aa20.46■□□□□ 0.87
TOM1-204ENST00000411850 CRYBG1Q9Y4K1 1723 aa20.45■□□□□ 0.87
TOM1-204ENST00000411850 LRSAM1Q6UWE0 723 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 CNTROBQ8N137 903 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 CHAMP1Q96JM3 812 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 ADCY9O60503 1353 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 XPCQ01831 940 aaPredicted RBP20.45■□□□□ 0.86
TOM1-204ENST00000411850 TEFQ10587 303 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 MTX1Q13505 466 aa20.45■□□□□ 0.86
TOM1-204ENST00000411850 KCNQ3O43525 872 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 PLEKHO1Q53GL0 409 aaPredicted RBP20.44■□□□□ 0.86
TOM1-204ENST00000411850 HS1BP3Q53T59 392 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 KRT28Q7Z3Y7 464 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 ZSCAN30Q86W11 494 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 NCAPD2Q15021 1401 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 BTBD11A6QL63 1104 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
TOM1-204ENST00000411850 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
TOM1-204ENST00000411850 TTC41PQ6P2S7 1318 aa20.44■□□□□ 0.86
TOM1-204ENST00000411850 OVOS2A0A0G2JMS6 1433 aa20.43■□□□□ 0.86
TOM1-204ENST00000411850 GCP02774 474 aa20.43■□□□□ 0.86
TOM1-204ENST00000411850 ZNF530Q6P9A1 599 aaPredicted RBP20.43■□□□□ 0.86
TOM1-204ENST00000411850 NOL8Q76FK4 1167 aaKnown RBP20.43■□□□□ 0.86
TOM1-204ENST00000411850 PDLIM2Q96JY6 352 aa20.43■□□□□ 0.86
TOM1-204ENST00000411850 LSG1Q9H089 658 aaKnown RBP20.43■□□□□ 0.86
TOM1-204ENST00000411850 NSFL1CQ9UNZ2 370 aaKnown RBP20.43■□□□□ 0.86
TOM1-204ENST00000411850 AMOTQ4VCS5 1084 aa20.43■□□□□ 0.86
TOM1-204ENST00000411850 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
TOM1-204ENST00000411850 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
TOM1-204ENST00000411850 ATF3P18847 181 aa20.42■□□□□ 0.86
TOM1-204ENST00000411850 HSPA2P54652 639 aa20.42■□□□□ 0.86
TOM1-204ENST00000411850 RGPD2P0DJD1 1756 aa20.42■□□□□ 0.86
TOM1-204ENST00000411850 ARHGEF25Q86VW2 580 aa20.42■□□□□ 0.86
TOM1-204ENST00000411850 SNX14Q9Y5W7 946 aa20.42■□□□□ 0.86
TOM1-204ENST00000411850 WDR33Q9C0J8 1336 aaKnown RBP20.42■□□□□ 0.86
TOM1-204ENST00000411850 ALDH1L1O75891 902 aa20.41■□□□□ 0.86
TOM1-204ENST00000411850 ALS2Q96Q42 1657 aa20.41■□□□□ 0.86
TOM1-204ENST00000411850 GLRX3O76003 335 aaKnown RBP20.41■□□□□ 0.86
TOM1-204ENST00000411850 TTC14Q96N46 770 aa20.41■□□□□ 0.86
TOM1-204ENST00000411850 SYCE3A1L190 88 aa20.4■□□□□ 0.86
TOM1-204ENST00000411850 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
TOM1-204ENST00000411850 HEG1Q9ULI3 1381 aa20.39■□□□□ 0.86
TOM1-204ENST00000411850 MPRIPQ6WCQ1 1025 aa20.39■□□□□ 0.86
TOM1-204ENST00000411850 LRRC59Q96AG4 307 aaKnown RBP20.39■□□□□ 0.86
TOM1-204ENST00000411850 HDAC5Q9UQL6 1122 aa20.39■□□□□ 0.85
TOM1-204ENST00000411850 ANXA1P04083 346 aa20.38■□□□□ 0.85
TOM1-204ENST00000411850 KIAA1211Q6ZU35 1233 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms