RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NECTIN2Q92692 538 aa20.23■□□□□ 0.83
LIMS2-208ENST00000410011 PHAXQ9H814 394 aaKnown RBP20.22■□□□□ 0.83
LIMS2-208ENST00000410011 NOL7Q9UMY1 257 aaKnown RBP20.22■□□□□ 0.83
LIMS2-208ENST00000410011 SGSM2O43147 1006 aa20.22■□□□□ 0.83
LIMS2-208ENST00000410011 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
LIMS2-208ENST00000410011 RAD50Q92878 1312 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 TPM2P07951 284 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 TERF1P54274 439 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 BEND3Q5T5X7 828 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 KLHL34Q8N239 644 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 RBM27Q9P2N5 1060 aaKnown RBP20.21■□□□□ 0.83
LIMS2-208ENST00000410011 ADGRL3Q9HAR2 1447 aa20.21■□□□□ 0.83
LIMS2-208ENST00000410011 WDR33Q9C0J8 1336 aaKnown RBP20.21■□□□□ 0.83
LIMS2-208ENST00000410011 MSNP26038 577 aaKnown RBP20.2■□□□□ 0.82
LIMS2-208ENST00000410011 SYAP1Q96A49 352 aaPredicted RBP20.2■□□□□ 0.82
LIMS2-208ENST00000410011 OFD1O75665 1012 aa20.2■□□□□ 0.82
LIMS2-208ENST00000410011 MCM5P33992 734 aa20.2■□□□□ 0.82
LIMS2-208ENST00000410011 MTX1Q13505 466 aa20.2■□□□□ 0.82
LIMS2-208ENST00000410011 CNTROBQ8N137 903 aa20.2■□□□□ 0.82
LIMS2-208ENST00000410011 IL1RAPL2Q9NP60 686 aa20.2■□□□□ 0.82
LIMS2-208ENST00000410011 TTC41PQ6P2S7 1318 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 KDM3BQ7LBC6 1761 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 KCNA6P17658 529 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 DNAAF4Q8WXU2 420 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 NSFL1CQ9UNZ2 370 aaKnown RBP20.19■□□□□ 0.82
LIMS2-208ENST00000410011 ZNF500O60304 480 aaPredicted RBP20.19■□□□□ 0.82
LIMS2-208ENST00000410011 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 CRYBG1Q9Y4K1 1723 aa20.19■□□□□ 0.82
LIMS2-208ENST00000410011 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
LIMS2-208ENST00000410011 NUTM1Q86Y26 1132 aa20.18■□□□□ 0.82
LIMS2-208ENST00000410011 IL25Q9H293 177 aa20.18■□□□□ 0.82
LIMS2-208ENST00000410011 SYCE3A1L190 88 aa20.18■□□□□ 0.82
LIMS2-208ENST00000410011 TTC14Q96N46 770 aa20.18■□□□□ 0.82
LIMS2-208ENST00000410011 LSG1Q9H089 658 aaKnown RBP20.18■□□□□ 0.82
LIMS2-208ENST00000410011 PHRF1Q9P1Y6 1649 aaKnown RBP20.17■□□□□ 0.82
LIMS2-208ENST00000410011 UBE2Q2Q8WVN8 375 aa20.17■□□□□ 0.82
LIMS2-208ENST00000410011 UPF3BQ9BZI7 483 aaKnown RBP20.17■□□□□ 0.82
LIMS2-208ENST00000410011 NFAT5O94916 1531 aa20.17■□□□□ 0.82
LIMS2-208ENST00000410011 NBPF7P0C2Y1 421 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-208ENST00000410011 HDAC5Q9UQL6 1122 aa20.16■□□□□ 0.82
LIMS2-208ENST00000410011 RRP9O43818 475 aaKnown RBP20.16■□□□□ 0.82
LIMS2-208ENST00000410011 PHF14O94880 888 aa20.16■□□□□ 0.82
LIMS2-208ENST00000410011 NUTM2GQ5VZR2 741 aa20.16■□□□□ 0.82
LIMS2-208ENST00000410011 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-208ENST00000410011 LTV1Q96GA3 475 aaPredicted RBP20.16■□□□□ 0.82
LIMS2-208ENST00000410011 SNX14Q9Y5W7 946 aa20.16■□□□□ 0.82
LIMS2-208ENST00000410011 GLRX3O76003 335 aaKnown RBP20.15■□□□□ 0.82
LIMS2-208ENST00000410011 PRKCSHP14314 528 aaPredicted RBP20.15■□□□□ 0.82
LIMS2-208ENST00000410011 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 PHF8Q9UPP1 1060 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 LTN1O94822 1766 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 PI4KAP2A4QPH2 592 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 PI4KAP1Q8N8J0 262 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 KCNH5Q8NCM2 988 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 CHAMP1Q96JM3 812 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 OVOS2A0A0G2JMS6 1433 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 LMO7Q8WWI1 1683 aa20.15■□□□□ 0.82
LIMS2-208ENST00000410011 ALDH1L1O75891 902 aa20.14■□□□□ 0.82
LIMS2-208ENST00000410011 NBPF6Q5VWK0 638 aa20.14■□□□□ 0.82
LIMS2-208ENST00000410011 NBPF4Q96M43 638 aa20.14■□□□□ 0.82
LIMS2-208ENST00000410011 CHPF2Q9P2E5 772 aa20.14■□□□□ 0.82
LIMS2-208ENST00000410011 NCAPD2Q15021 1401 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 KIAA1211Q6ZU35 1233 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 KCNB2Q92953 911 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 LGR6Q9HBX8 967 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 LIMCH1Q9UPQ0 1083 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 ADCY9O60503 1353 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 AMOTQ4VCS5 1084 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 FOXD4L5Q5VV16 416 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 RUFY2Q8WXA3 655 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 FOXD4L4Q8WXT5 416 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 DBF4Q9UBU7 674 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 ZKSCAN5Q9Y2L8 839 aa20.13■□□□□ 0.81
LIMS2-208ENST00000410011 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.13■□□□□ 0.81
LIMS2-208ENST00000410011 USHBP1Q8N6Y0 703 aa20.12■□□□□ 0.81
LIMS2-208ENST00000410011 CCDC39Q9UFE4 941 aa20.12■□□□□ 0.81
LIMS2-208ENST00000410011 RPAP1Q9BWH6 1393 aaPredicted RBP20.12■□□□□ 0.81
LIMS2-208ENST00000410011 HEG1Q9ULI3 1381 aa20.12■□□□□ 0.81
LIMS2-208ENST00000410011 PLEKHO1Q53GL0 409 aaPredicted RBP20.11■□□□□ 0.81
LIMS2-208ENST00000410011 FAM184AQ8NB25 1140 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 TM6SF1Q9BZW5 370 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 UVSSAQ2YD98 709 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 ERC1Q8IUD2 1116 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 FER1L4A9Z1Z3 1794 aa20.11■□□□□ 0.81
LIMS2-208ENST00000410011 LETM1O95202 739 aaPredicted RBP20.1■□□□□ 0.81
LIMS2-208ENST00000410011 CLASRPQ8N2M8 674 aaKnown RBP20.1■□□□□ 0.81
LIMS2-208ENST00000410011 BTBD11A6QL63 1104 aa20.1■□□□□ 0.81
LIMS2-208ENST00000410011 TEFQ10587 303 aa20.1■□□□□ 0.81
LIMS2-208ENST00000410011 NOL8Q76FK4 1167 aaKnown RBP20.1■□□□□ 0.81
LIMS2-208ENST00000410011 LMTK3Q96Q04 1460 aa20.09■□□□□ 0.81
LIMS2-208ENST00000410011 ZSCAN22P10073 491 aaPredicted RBP20.09■□□□□ 0.81
LIMS2-208ENST00000410011 AK2P54819 239 aa20.09■□□□□ 0.81
LIMS2-208ENST00000410011 RASEFQ8IZ41 740 aa20.09■□□□□ 0.81
LIMS2-208ENST00000410011 ATP6V1DQ9Y5K8 247 aa20.09■□□□□ 0.81
LIMS2-208ENST00000410011 PDIA4P13667 645 aaKnown RBP20.09■□□□□ 0.81
LIMS2-208ENST00000410011 ECHDC1Q9NTX5 307 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms