RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 LDHAL6AQ6ZMR3 332 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 NAPBQ9H115 298 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 DNAJC5Q9H3Z4 198 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 PDE4AP27815 886 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 KIF1BPQ96EK5 621 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 QTRT2Q9H974 415 aaKnown RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 DDX49Q9Y6V7 483 aaKnown RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 OFD1O75665 1012 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 TRPC5Q9UL62 973 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 GOLGA6L1Q8N7Z2 621 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 VTI1AQ96AJ9 217 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 PIK3R4Q99570 1358 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 VEZTQ9HBM0 779 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 F8W031 263 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 STK3Q13188 491 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 DCAF5Q96JK2 942 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 C22orf23Q9BZE7 217 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 EIF6P56537 245 aaKnown RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 ALDH1L2Q3SY69 923 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 BMP2KQ9NSY1 1161 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 UQCRFS1P1P0C7P4 283 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 KRT32Q14532 448 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 CWC27Q6UX04 472 aaKnown RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 ANKRD13DQ6ZTN6 518 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 FLT4P35916 1363 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 RANBP6O60518 1105 aaKnown RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 CNBD1Q8NA66 436 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 RNF41Q9H4P4 317 aaPredicted RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 PDZRN3Q9UPQ7 1066 aa5.93□□□□□ -1.46
SCN3A-203ENST00000409101 RPRD2Q5VT52 1461 aaKnown RBP5.93□□□□□ -1.46
SCN3A-203ENST00000409101 NUCB2P80303 420 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 SLC39A6Q13433 755 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 STK38Q15208 465 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 JMYQ8N9B5 988 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 NAT10Q9H0A0 1025 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 BIN2Q9UBW5 565 aaPredicted RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PTPRCP08575 1304 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 H0YIN7 160 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 RIMBP2O15034 1052 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 TNNI2P48788 182 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 HSP90AB2PQ58FF8 381 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 IPO9Q96P70 1041 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 CRNKL1Q9BZJ0 848 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 ANKRD2Q9GZV1 360 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 SHANK2Q9UPX8 1470 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 SSBP05455 408 aaKnown RBP eCLIP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PDCP20941 246 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 ZC3H12CQ9C0D7 883 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PDCL3Q9H2J4 239 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 LRRFIP2Q9Y608 721 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 NPHP4O75161 1426 aaPredicted RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 YTHDC2Q9H6S0 1430 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 MCM2P49736 904 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 FLIIQ13045 1269 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PPP4R3BQ5MIZ7 849 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 ORAI2Q96SN7 254 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 RDXP35241 583 aaKnown RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PIP4K2AP48426 406 aaPredicted RBP5.92□□□□□ -1.46
SCN3A-203ENST00000409101 PDE4BQ07343 736 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 IP6K1Q92551 441 aa5.92□□□□□ -1.46
SCN3A-203ENST00000409101 HOXC9P31274 260 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 IQCA1Q86XH1 822 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 SUPT20HQ8NEM7 779 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 PDRG1Q9NUG6 133 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 UBE3BQ7Z3V4 1068 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 CTCFLQ8NI51 663 aaPredicted RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 XAGE3Q8WTP9 111 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 ZRANB1Q9UGI0 708 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 U3KPZ7 1027 aaPredicted RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 F6X3S4 739 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 DESP17661 470 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 FLAD1Q8NFF5 587 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 DDX17Q92841 729 aaKnown RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 FAM13BQ9NYF5 915 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 TMEM2Q9UHN6 1383 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 NEK4P51957 841 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 STIM1Q13586 685 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 BLOC1S2Q6QNY1 142 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 CHD1LQ86WJ1 897 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 NFATC2IPQ8NCF5 419 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 SDF4Q9BRK5 362 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 BOLA2Q9H3K6 86 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 ZNF408Q9H9D4 720 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 MAST1Q9Y2H9 1570 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 GLRX3O76003 335 aaKnown RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 PICALMQ13492 652 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 CCDC8Q9H0W5 538 aaPredicted RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 RBM19Q9Y4C8 960 aaKnown RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 EIF2AK4Q9P2K8 1649 aaKnown RBP5.91□□□□□ -1.46
SCN3A-203ENST00000409101 DISP1Q96F81 1524 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 DISP3Q9P2K9 1392 aa5.91□□□□□ -1.46
SCN3A-203ENST00000409101 AEBP1Q8IUX7 1158 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 EIF4A2Q14240 407 aaKnown RBP5.9□□□□□ -1.46
SCN3A-203ENST00000409101 TMEM57Q8N5G2 664 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 CHPF2Q9P2E5 772 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 MX1P20591 662 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 CA8P35219 290 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 CCAR2Q8N163 923 aaKnown RBP5.9□□□□□ -1.46
SCN3A-203ENST00000409101 EXOC6BQ9Y2D4 811 aa5.9□□□□□ -1.46
SCN3A-203ENST00000409101 RABEP1Q15276 862 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms