RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 MAGEC2Q9UBF1 373 aaPredicted RBP16.72■□□□□ 0.27
ITGA6-202ENST00000409080 UQCRFS1P1P0C7P4 283 aa16.72■□□□□ 0.27
ITGA6-202ENST00000409080 ZGPATQ8N5A5 531 aaKnown RBP16.72■□□□□ 0.27
ITGA6-202ENST00000409080 CCDC196A0A1B0GTZ2 297 aa16.72■□□□□ 0.27
ITGA6-202ENST00000409080 TPTE2Q6XPS3 522 aa16.72■□□□□ 0.27
ITGA6-202ENST00000409080 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
ITGA6-202ENST00000409080 NUTM1Q86Y26 1132 aa16.71■□□□□ 0.27
ITGA6-202ENST00000409080 IQCA1Q86XH1 822 aa16.71■□□□□ 0.27
ITGA6-202ENST00000409080 CABP5Q9NP86 173 aa16.71■□□□□ 0.27
ITGA6-202ENST00000409080 EHMT1Q9H9B1 1298 aa16.71■□□□□ 0.27
ITGA6-202ENST00000409080 CFAP43Q8NDM7 1665 aa16.71■□□□□ 0.26
ITGA6-202ENST00000409080 STIM1Q13586 685 aa16.71■□□□□ 0.26
ITGA6-202ENST00000409080 MINDY4BA8MYZ0 360 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
ITGA6-202ENST00000409080 MAST1Q9Y2H9 1570 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 IP6K1Q92551 441 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 PDRG1Q9NUG6 133 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 LRRFIP2Q9Y608 721 aaKnown RBP16.7■□□□□ 0.26
ITGA6-202ENST00000409080 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 ASXL1Q8IXJ9 1541 aa16.7■□□□□ 0.26
ITGA6-202ENST00000409080 UBE3BQ7Z3V4 1068 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 UTP14AQ9BVJ6 771 aaKnown RBP16.69■□□□□ 0.26
ITGA6-202ENST00000409080 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 SLAIN2Q9P270 581 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 DEKP35659 375 aaKnown RBP16.69■□□□□ 0.26
ITGA6-202ENST00000409080 PPP4R3BQ5MIZ7 849 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 OGFOD1Q8N543 542 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 CUL5Q93034 780 aa16.69■□□□□ 0.26
ITGA6-202ENST00000409080 CTCFLQ8NI51 663 aaPredicted RBP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 F6X3S4 739 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 ATP5J2-PTCD1G3V325 749 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 SYCP1Q15431 976 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 MBD3O95983 291 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 RDXP35241 583 aaKnown RBP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 C16orf71Q8IYS4 520 aaPredicted RBP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 HMGB1P09429 215 aaKnown RBP16.68■□□□□ 0.26
ITGA6-202ENST00000409080 FEZ1Q99689 392 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 MBIPQ9NS73 344 aa16.68■□□□□ 0.26
ITGA6-202ENST00000409080 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
ITGA6-202ENST00000409080 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 DACH1Q9UI36 760 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 TMEM2Q9UHN6 1383 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 STK3Q13188 491 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 NF2P35240 595 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 JDP2Q8WYK2 163 aa16.67■□□□□ 0.26
ITGA6-202ENST00000409080 MPHOSPH6Q99547 160 aaKnown RBP16.67■□□□□ 0.26
ITGA6-202ENST00000409080 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 NAP1L1P55209 391 aaKnown RBP16.66■□□□□ 0.26
ITGA6-202ENST00000409080 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
ITGA6-202ENST00000409080 MAPKBP1O60336 1514 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 EYA3Q99504 573 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 CEP131Q9UPN4 1083 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 TRIM21P19474 475 aaKnown RBP16.66■□□□□ 0.26
ITGA6-202ENST00000409080 TRAPPC3LQ5T215 181 aa16.66■□□□□ 0.26
ITGA6-202ENST00000409080 WDR33Q9C0J8 1336 aaKnown RBP16.65■□□□□ 0.26
ITGA6-202ENST00000409080 DNAI2Q9GZS0 605 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 DNMT1P26358 1616 aaKnown RBP16.65■□□□□ 0.26
ITGA6-202ENST00000409080 WDR78Q5VTH9 848 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 ZNF804AQ7Z570 1209 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 PDE4BQ07343 736 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 PPP4R3AQ6IN85 833 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 XAGE3Q8WTP9 111 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 ZHX3Q9H4I2 956 aa16.65■□□□□ 0.26
ITGA6-202ENST00000409080 ZNF213O14771 459 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 HOXC9P31274 260 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 ZFYVE27Q5T4F4 411 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 CCAR2Q8N163 923 aaKnown RBP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 PIK3C2GO75747 1445 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 RANBP6O60518 1105 aaKnown RBP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 BAG6P46379 1132 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 USP21Q9UK80 565 aa16.64■□□□□ 0.25
ITGA6-202ENST00000409080 LARP1BQ659C4 914 aaKnown RBP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 SOS1Q07889 1333 aaPredicted RBP16.64■□□□□ 0.25
ITGA6-202ENST00000409080 CRNKL1Q9BZJ0 848 aaKnown RBP16.63■□□□□ 0.25
ITGA6-202ENST00000409080 MAGI2Q86UL8 1455 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 ARHGEF12Q9NZN5 1544 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 TRAF1Q13077 416 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 COPS6Q7L5N1 327 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 ECHDC1Q9NTX5 307 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 CLEC11AQ9Y240 323 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
ITGA6-202ENST00000409080 KRT85P78386 507 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 CCDC173Q0VFZ6 552 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 KSR2Q6VAB6 950 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 HOMER1Q86YM7 354 aa16.62■□□□□ 0.25
ITGA6-202ENST00000409080 SMARCE1Q969G3 411 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms