RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 HDAC5Q9UQL6 1122 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 ANAPC15P60006 121 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 ICE2Q659A1 982 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 CKAP2LQ8IYA6 745 aa15.18■□□□□ 0.02
HERC3-203ENST00000407637 TUBGCP6Q96RT7 1819 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 RNF20Q5VTR2 975 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 CEP85Q6P2H3 762 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 LRRC8AQ8IWT6 810 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 LARP6Q9BRS8 491 aaKnown RBP15.17■□□□□ 0.02
HERC3-203ENST00000407637 NUP62CLQ9H1M0 184 aa15.17■□□□□ 0.02
HERC3-203ENST00000407637 API5Q9BZZ5 524 aaKnown RBP15.16■□□□□ 0.02
HERC3-203ENST00000407637 PDE1AP54750 535 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 ZSCAN26Q16670 478 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 TRAK1Q9UPV9 953 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 ATP6V1DQ9Y5K8 247 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 CARMIL2Q6F5E8 1435 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 NSD2O96028 1365 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 LRRC7Q96NW7 1537 aa15.16■□□□□ 0.02
HERC3-203ENST00000407637 LIG1P18858 919 aa15.15■□□□□ 0.02
HERC3-203ENST00000407637 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
HERC3-203ENST00000407637 TPM4P67936 248 aa15.15■□□□□ 0.02
HERC3-203ENST00000407637 ATG3Q9NT62 314 aa15.15■□□□□ 0.02
HERC3-203ENST00000407637 FAM135BQ49AJ0 1406 aa15.15■□□□□ 0.02
HERC3-203ENST00000407637 KRT24Q2M2I5 525 aa15.14■□□□□ 0.01
HERC3-203ENST00000407637 TDRD7Q8NHU6 1098 aaKnown RBP15.14■□□□□ 0.01
HERC3-203ENST00000407637 TOMM22Q9NS69 142 aa15.14■□□□□ 0.01
HERC3-203ENST00000407637 SKILP12757 684 aa15.14■□□□□ 0.01
HERC3-203ENST00000407637 ARHGAP29Q52LW3 1261 aa15.14■□□□□ 0.01
HERC3-203ENST00000407637 CTR9Q6PD62 1173 aa15.14■□□□□ 0.01
HERC3-203ENST00000407637 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 BRD2P25440 801 aaKnown RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 SMC3Q9UQE7 1217 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 UGGT1Q9NYU2 1555 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 TWISTNBQ3B726 338 aaPredicted RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 ZRANB2O95218 330 aaKnown RBP eCLIP15.13■□□□□ 0.01
HERC3-203ENST00000407637 SRLQ86TD4 932 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 RPAP2Q8IXW5 612 aaPredicted RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 CCAR2Q8N163 923 aaKnown RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 MYCBPQ99417 103 aaPredicted RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 TNMDQ9H2S6 317 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 GGNBP2Q9H3C7 697 aa15.13■□□□□ 0.01
HERC3-203ENST00000407637 ZCCHC17Q9NP64 241 aaKnown RBP15.13■□□□□ 0.01
HERC3-203ENST00000407637 DNAJC25Q9H1X3 360 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 RRP15Q9Y3B9 282 aaKnown RBP15.12■□□□□ 0.01
HERC3-203ENST00000407637 MSH6P52701 1360 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 KIF24Q5T7B8 1368 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 AATKQ6ZMQ8 1374 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 APPP05067 770 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 CHMLP26374 656 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 CDC25BP30305 580 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 TMCO3Q6UWJ1 677 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 SYTL4Q96C24 671 aaPredicted RBP15.12■□□□□ 0.01
HERC3-203ENST00000407637 NCAPGQ9BPX3 1015 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 OSBPL3Q9H4L5 887 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 MBIPQ9NS73 344 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 MTMR6Q9Y217 621 aa15.12■□□□□ 0.01
HERC3-203ENST00000407637 PLCH2O75038 1416 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 IFT172Q9UG01 1749 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 CCDC69A6NI79 296 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 SEC31AO94979 1220 aaKnown RBP15.11■□□□□ 0.01
HERC3-203ENST00000407637 OAS2P29728 719 aaKnown RBP15.11■□□□□ 0.01
HERC3-203ENST00000407637 CCZ1BP86790 482 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 CCZ1P86791 482 aaPredicted RBP15.11■□□□□ 0.01
HERC3-203ENST00000407637 TTC6Q86TZ1 520 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 RILPL2Q969X0 211 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 CWC15Q9P013 229 aaKnown RBP15.11■□□□□ 0.01
HERC3-203ENST00000407637 ZNF165P49910 485 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 GPS2Q13227 327 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 C8orf58Q8NAV2 365 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 L2HGDHQ9H9P8 463 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 DACT1Q9NYF0 836 aa15.11■□□□□ 0.01
HERC3-203ENST00000407637 SSH2Q76I76 1423 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 VPS37CA5D8V6 355 aaPredicted RBP15.1■□□□□ 0.01
HERC3-203ENST00000407637 GUCY2CP25092 1073 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 PRKAR2BP31323 418 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 SLC26A8Q96RN1 970 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 IL25Q9H293 177 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 VWDEQ8N2E2 1590 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 DIAPH1O60610 1272 aaKnown RBP15.1■□□□□ 0.01
HERC3-203ENST00000407637 AK2P54819 239 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 TSGA10IPQ3SY00 556 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 IL17RAQ96F46 866 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 DRC1Q96MC2 740 aa15.1■□□□□ 0.01
HERC3-203ENST00000407637 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 NEMFO60524 1076 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 LARGE1O95461 756 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 GJB2P29033 226 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 RUFY3Q7L099 469 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 FILIP1Q7Z7B0 1213 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 MEIS3Q99687 375 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 BRMS1Q9HCU9 246 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 MROH2AA6NES4 1674 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 SNW1Q13573 536 aaKnown RBP15.09■□□□□ 0.01
HERC3-203ENST00000407637 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.09■□□□□ 0.01
HERC3-203ENST00000407637 ARGLU1Q9NWB6 273 aaPredicted RBP15.09■□□□□ 0.01
HERC3-203ENST00000407637 JRKLQ9Y4A0 524 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 USP16Q9Y5T5 823 aa15.09■□□□□ 0.01
HERC3-203ENST00000407637 GLI2P10070 1586 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms