RNA–Protein interactions for RNA: ENST00000407622.2

COL23A1-202, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL23A1, Length 2,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-202ENST00000407622 MED1Q15648 1581 aaPredicted RBP20.23■□□□□ 0.83
COL23A1-202ENST00000407622 PPP1R42Q7Z4L9 355 aa20.23■□□□□ 0.83
COL23A1-202ENST00000407622 SSH3Q8TE77 659 aa20.23■□□□□ 0.83
COL23A1-202ENST00000407622 CHPF2Q9P2E5 772 aa20.23■□□□□ 0.83
COL23A1-202ENST00000407622 TMX3Q96JJ7 454 aa20.22■□□□□ 0.83
COL23A1-202ENST00000407622 PLEKHG5O94827 1062 aa20.22■□□□□ 0.83
COL23A1-202ENST00000407622 NBPF7P0C2Y1 421 aaPredicted RBP20.22■□□□□ 0.83
COL23A1-202ENST00000407622 DCCP43146 1447 aa20.22■□□□□ 0.83
COL23A1-202ENST00000407622 MAP4K4O95819 1239 aaPredicted RBP20.21■□□□□ 0.83
COL23A1-202ENST00000407622 NOL8Q76FK4 1167 aaKnown RBP20.21■□□□□ 0.83
COL23A1-202ENST00000407622 SRCIN1Q9C0H9 1055 aa20.21■□□□□ 0.83
COL23A1-202ENST00000407622 ERBB4Q15303 1308 aa20.21■□□□□ 0.83
COL23A1-202ENST00000407622 FOXD4L5Q5VV16 416 aaPredicted RBP20.21■□□□□ 0.83
COL23A1-202ENST00000407622 FOXD4L4Q8WXT5 416 aaPredicted RBP20.21■□□□□ 0.83
COL23A1-202ENST00000407622 KDM3BQ7LBC6 1761 aa20.21■□□□□ 0.83
COL23A1-202ENST00000407622 SURF6O75683 361 aaKnown RBP20.2■□□□□ 0.82
COL23A1-202ENST00000407622 POLA2Q14181 598 aa20.2■□□□□ 0.82
COL23A1-202ENST00000407622 ZNF335Q9H4Z2 1342 aaPredicted RBP20.2■□□□□ 0.82
COL23A1-202ENST00000407622 CAVIN1Q6NZI2 390 aaKnown RBP20.2■□□□□ 0.82
COL23A1-202ENST00000407622 NCLP19338 710 aaKnown RBP20.19■□□□□ 0.82
COL23A1-202ENST00000407622 MST1RQ04912 1400 aa20.19■□□□□ 0.82
COL23A1-202ENST00000407622 PI4KAP2A4QPH2 592 aa20.19■□□□□ 0.82
COL23A1-202ENST00000407622 PI4KAP1Q8N8J0 262 aa20.19■□□□□ 0.82
COL23A1-202ENST00000407622 PRPF40AO75400 957 aaKnown RBP20.18■□□□□ 0.82
COL23A1-202ENST00000407622 BEND3Q5T5X7 828 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 MPRIPQ6WCQ1 1025 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 CADPS2Q86UW7 1296 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 SRGAP3O43295 1099 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 RHPN1Q8TCX5 695 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 GPT2Q8TD30 523 aa20.18■□□□□ 0.82
COL23A1-202ENST00000407622 UPF3BQ9BZI7 483 aaKnown RBP20.18■□□□□ 0.82
COL23A1-202ENST00000407622 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
COL23A1-202ENST00000407622 ZNF530Q6P9A1 599 aaPredicted RBP20.17■□□□□ 0.82
COL23A1-202ENST00000407622 PI4K2BQ8TCG2 481 aa20.17■□□□□ 0.82
COL23A1-202ENST00000407622 DNAAF4Q8WXU2 420 aa20.17■□□□□ 0.82
COL23A1-202ENST00000407622 PXDNQ92626 1479 aa20.17■□□□□ 0.82
COL23A1-202ENST00000407622 RBM27Q9P2N5 1060 aaKnown RBP20.16■□□□□ 0.82
COL23A1-202ENST00000407622 AOX1Q06278 1338 aa20.16■□□□□ 0.82
COL23A1-202ENST00000407622 ADCY9O60503 1353 aa20.16■□□□□ 0.82
COL23A1-202ENST00000407622 MCCP23508 829 aa20.16■□□□□ 0.82
COL23A1-202ENST00000407622 CLCN1P35523 988 aa20.16■□□□□ 0.82
COL23A1-202ENST00000407622 ZSCAN23Q3MJ62 389 aa20.16■□□□□ 0.82
COL23A1-202ENST00000407622 LMO7Q8WWI1 1683 aa20.15■□□□□ 0.82
COL23A1-202ENST00000407622 BTBD11A6QL63 1104 aa20.15■□□□□ 0.82
COL23A1-202ENST00000407622 NASPP49321 788 aaPredicted RBP20.15■□□□□ 0.82
COL23A1-202ENST00000407622 CUL4AQ13619 759 aa20.15■□□□□ 0.82
COL23A1-202ENST00000407622 NSFL1CQ9UNZ2 370 aaKnown RBP20.15■□□□□ 0.82
COL23A1-202ENST00000407622 RAB11FIP3O75154 756 aa20.14■□□□□ 0.82
COL23A1-202ENST00000407622 ANAPC15P60006 121 aa20.14■□□□□ 0.82
COL23A1-202ENST00000407622 TEFQ10587 303 aa20.14■□□□□ 0.82
COL23A1-202ENST00000407622 ZNF445P59923 1031 aa20.14■□□□□ 0.81
COL23A1-202ENST00000407622 KRT28Q7Z3Y7 464 aa20.14■□□□□ 0.81
COL23A1-202ENST00000407622 ESPNB1AK53 854 aa20.13■□□□□ 0.81
COL23A1-202ENST00000407622 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
COL23A1-202ENST00000407622 AKAP4Q5JQC9 854 aa20.13■□□□□ 0.81
COL23A1-202ENST00000407622 XIRP1Q702N8 1843 aaKnown RBP20.13■□□□□ 0.81
COL23A1-202ENST00000407622 PRAMEF22A3QJZ6 481 aa20.13■□□□□ 0.81
COL23A1-202ENST00000407622 HOXB7P09629 217 aa20.13■□□□□ 0.81
COL23A1-202ENST00000407622 KIF1AQ12756 1690 aa20.12■□□□□ 0.81
COL23A1-202ENST00000407622 KIF1BPQ96EK5 621 aa20.12■□□□□ 0.81
COL23A1-202ENST00000407622 BRD1O95696 1058 aa20.11■□□□□ 0.81
COL23A1-202ENST00000407622 MCM2P49736 904 aa20.11■□□□□ 0.81
COL23A1-202ENST00000407622 IL17RAQ96F46 866 aa20.11■□□□□ 0.81
COL23A1-202ENST00000407622 HSPA4P34932 840 aa20.11■□□□□ 0.81
COL23A1-202ENST00000407622 KCNH5Q8NCM2 988 aa20.11■□□□□ 0.81
COL23A1-202ENST00000407622 RNMTO43148 476 aaKnown RBP20.1■□□□□ 0.81
COL23A1-202ENST00000407622 PHRF1Q9P1Y6 1649 aaKnown RBP20.1■□□□□ 0.81
COL23A1-202ENST00000407622 PLEKHO1Q53GL0 409 aaPredicted RBP20.1■□□□□ 0.81
COL23A1-202ENST00000407622 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
COL23A1-202ENST00000407622 TMEM63CQ9P1W3 806 aa20.1■□□□□ 0.81
COL23A1-202ENST00000407622 SGSM2O43147 1006 aa20.09■□□□□ 0.81
COL23A1-202ENST00000407622 GCP02774 474 aa20.09■□□□□ 0.81
COL23A1-202ENST00000407622 RBSNQ9H1K0 784 aa20.09■□□□□ 0.81
COL23A1-202ENST00000407622 PRIM1P49642 420 aaKnown RBP20.09■□□□□ 0.81
COL23A1-202ENST00000407622 ARHGEF25Q86VW2 580 aa20.09■□□□□ 0.81
COL23A1-202ENST00000407622 DDX17Q92841 729 aaKnown RBP20.09■□□□□ 0.81
COL23A1-202ENST00000407622 MAP3K2Q9Y2U5 619 aa20.09■□□□□ 0.81
COL23A1-202ENST00000407622 PPP1R9BQ96SB3 815 aa20.08■□□□□ 0.81
COL23A1-202ENST00000407622 RAD50Q92878 1312 aa20.08■□□□□ 0.8
COL23A1-202ENST00000407622 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.8
COL23A1-202ENST00000407622 INTS4Q96HW7 963 aaKnown RBP20.08■□□□□ 0.8
COL23A1-202ENST00000407622 LSG1Q9H089 658 aaKnown RBP20.08■□□□□ 0.8
COL23A1-202ENST00000407622 TRPM3Q9HCF6 1732 aaPredicted RBP20.08■□□□□ 0.8
COL23A1-202ENST00000407622 GIGYF1O75420 1035 aaPredicted RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 CCDC173Q0VFZ6 552 aa20.07■□□□□ 0.8
COL23A1-202ENST00000407622 CWF19L2Q2TBE0 894 aaKnown RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 RASEFQ8IZ41 740 aa20.07■□□□□ 0.8
COL23A1-202ENST00000407622 DBF4Q9UBU7 674 aaPredicted RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 PA2G4Q9UQ80 394 aaKnown RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 AXIN2Q9Y2T1 843 aa20.07■□□□□ 0.8
COL23A1-202ENST00000407622 CWC27Q6UX04 472 aaKnown RBP20.07■□□□□ 0.8
COL23A1-202ENST00000407622 ANKRD24Q8TF21 1146 aa20.07■□□□□ 0.8
COL23A1-202ENST00000407622 SNX14Q9Y5W7 946 aa20.07■□□□□ 0.8
COL23A1-202ENST00000407622 CRYBG1Q9Y4K1 1723 aa20.06■□□□□ 0.8
COL23A1-202ENST00000407622 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
COL23A1-202ENST00000407622 C1orf141Q5JVX7 400 aa20.06■□□□□ 0.8
COL23A1-202ENST00000407622 LARP6Q9BRS8 491 aaKnown RBP20.06■□□□□ 0.8
COL23A1-202ENST00000407622 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms