RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 XRCC6P12956 609 aaKnown RBP eCLIP18.83■□□□□ 0.61
LIMK2-204ENST00000406516 FAM43AQ8N2R8 423 aa18.83■□□□□ 0.61
LIMK2-204ENST00000406516 APBB1O00213 710 aa18.83■□□□□ 0.6
LIMK2-204ENST00000406516 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.83■□□□□ 0.6
LIMK2-204ENST00000406516 ATP10DQ9P241 1426 aa18.82■□□□□ 0.6
LIMK2-204ENST00000406516 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
LIMK2-204ENST00000406516 ANKRD44Q8N8A2 993 aa18.82■□□□□ 0.6
LIMK2-204ENST00000406516 MIS18AQ9NYP9 233 aa18.82■□□□□ 0.6
LIMK2-204ENST00000406516 K7ELQ4 463 aaPredicted RBP18.82■□□□□ 0.6
LIMK2-204ENST00000406516 CDCA7Q9BWT1 371 aaPredicted RBP18.82■□□□□ 0.6
LIMK2-204ENST00000406516 EXOC5O00471 708 aa18.81■□□□□ 0.6
LIMK2-204ENST00000406516 DDB1Q16531 1140 aa18.81■□□□□ 0.6
LIMK2-204ENST00000406516 OTUD7AQ8TE49 926 aaPredicted RBP18.81■□□□□ 0.6
LIMK2-204ENST00000406516 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
LIMK2-204ENST00000406516 CEP85Q6P2H3 762 aa18.81■□□□□ 0.6
LIMK2-204ENST00000406516 ZCRB1Q8TBF4 217 aaKnown RBP18.81■□□□□ 0.6
LIMK2-204ENST00000406516 CIZ1Q9ULV3 898 aaPredicted RBP18.81■□□□□ 0.6
LIMK2-204ENST00000406516 OVOS2A0A0G2JMS6 1433 aa18.81■□□□□ 0.6
LIMK2-204ENST00000406516 MEIS3Q99687 375 aa18.8■□□□□ 0.6
LIMK2-204ENST00000406516 DDX54Q8TDD1 881 aaKnown RBP18.8■□□□□ 0.6
LIMK2-204ENST00000406516 PANK2Q9BZ23 570 aa18.8■□□□□ 0.6
LIMK2-204ENST00000406516 SMARCA5O60264 1052 aaPredicted RBP18.79■□□□□ 0.6
LIMK2-204ENST00000406516 RAB3GAP1Q15042 981 aa18.79■□□□□ 0.6
LIMK2-204ENST00000406516 FAM182BQ5T319 152 aa18.79■□□□□ 0.6
LIMK2-204ENST00000406516 SLC4A2P04920 1241 aa18.79■□□□□ 0.6
LIMK2-204ENST00000406516 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
LIMK2-204ENST00000406516 RPAP2Q8IXW5 612 aaPredicted RBP18.79■□□□□ 0.6
LIMK2-204ENST00000406516 PTPRCP08575 1304 aa18.78■□□□□ 0.6
LIMK2-204ENST00000406516 PLEKHO1Q53GL0 409 aaPredicted RBP18.78■□□□□ 0.6
LIMK2-204ENST00000406516 GBP4Q96PP9 640 aa18.78■□□□□ 0.6
LIMK2-204ENST00000406516 CYP27B1O15528 508 aa18.77■□□□□ 0.6
LIMK2-204ENST00000406516 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.6
LIMK2-204ENST00000406516 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
LIMK2-204ENST00000406516 SPG7Q9UQ90 795 aa18.77■□□□□ 0.6
LIMK2-204ENST00000406516 THSD7AQ9UPZ6 1657 aa18.77■□□□□ 0.6
LIMK2-204ENST00000406516 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.77■□□□□ 0.592e-6■■■■□ 24.3
LIMK2-204ENST00000406516 AMOTQ4VCS5 1084 aa18.76■□□□□ 0.59
LIMK2-204ENST00000406516 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
LIMK2-204ENST00000406516 TSPYL4Q9UJ04 414 aa18.76■□□□□ 0.59
LIMK2-204ENST00000406516 ZNF530Q6P9A1 599 aaPredicted RBP18.75■□□□□ 0.59
LIMK2-204ENST00000406516 RTF1Q92541 710 aaKnown RBP18.75■□□□□ 0.59
LIMK2-204ENST00000406516 F6X3S4 739 aa18.75■□□□□ 0.59
LIMK2-204ENST00000406516 G2E3Q7L622 706 aa18.75■□□□□ 0.59
LIMK2-204ENST00000406516 SDSP20132 328 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 KRT27Q7Z3Y8 459 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 TNS2Q63HR2 1409 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 EP400Q96L91 3159 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 SSFA2P28290 1259 aa18.74■□□□□ 0.59
LIMK2-204ENST00000406516 RRAGDQ9NQL2 400 aaPredicted RBP18.74■□□□□ 0.59
LIMK2-204ENST00000406516 LRRC37A3O60309 1634 aa18.73■□□□□ 0.59
LIMK2-204ENST00000406516 PHKG2P15735 406 aa18.73■□□□□ 0.59
LIMK2-204ENST00000406516 MRE11P49959 708 aa18.73■□□□□ 0.59
LIMK2-204ENST00000406516 USP26Q9BXU7 913 aa18.73■□□□□ 0.59
LIMK2-204ENST00000406516 PARP4Q9UKK3 1724 aaKnown RBP18.72■□□□□ 0.59
LIMK2-204ENST00000406516 RABEP1Q15276 862 aa18.72■□□□□ 0.59
LIMK2-204ENST00000406516 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
LIMK2-204ENST00000406516 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
LIMK2-204ENST00000406516 IFNL2Q8IZJ0 200 aa18.72■□□□□ 0.59
LIMK2-204ENST00000406516 EIF5BO60841 1220 aaKnown RBP18.71■□□□□ 0.59
LIMK2-204ENST00000406516 GRPEL1Q9HAV7 217 aa18.71■□□□□ 0.59
LIMK2-204ENST00000406516 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
LIMK2-204ENST00000406516 C1orf141Q5JVX7 400 aa18.7■□□□□ 0.58
LIMK2-204ENST00000406516 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
LIMK2-204ENST00000406516 HMMRO75330 724 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 AKAP4Q5JQC9 854 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 PLEKHG2Q9H7P9 1386 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 BRWD3Q6RI45 1802 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 PKD1L3Q7Z443 1732 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 ILDR2Q71H61 639 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 LGR6Q9HBX8 967 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
LIMK2-204ENST00000406516 CCT4P50991 539 aaKnown RBP18.68■□□□□ 0.58
LIMK2-204ENST00000406516 NKX1-1Q15270 411 aaPredicted RBP18.67■□□□□ 0.58
LIMK2-204ENST00000406516 SKOR2Q2VWA4 1001 aaPredicted RBP18.67■□□□□ 0.58
LIMK2-204ENST00000406516 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 NECTIN2Q92692 538 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 ACSBG1Q96GR2 724 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 IL17REQ8NFR9 667 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 STK31Q9BXU1 1019 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 EXOC6BQ9Y2D4 811 aa18.67■□□□□ 0.58
LIMK2-204ENST00000406516 GAS2L3Q86XJ1 694 aa18.66■□□□□ 0.58
LIMK2-204ENST00000406516 PTMSP20962 102 aa18.66■□□□□ 0.58
LIMK2-204ENST00000406516 MAP3K5Q99683 1374 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 GOLGA6L22H0YM25 854 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 TSHZ3Q63HK5 1081 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 PTF1AQ7RTS3 328 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 AK9Q5TCS8 1911 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 KCNQ2O43526 872 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 BAG4O95429 457 aaKnown RBP18.65■□□□□ 0.58
LIMK2-204ENST00000406516 GNAI2P04899 355 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 DCAF5Q96JK2 942 aa18.65■□□□□ 0.58
LIMK2-204ENST00000406516 ISY1Q9ULR0 285 aaKnown RBP18.65■□□□□ 0.58
LIMK2-204ENST00000406516 REC8O95072 547 aa18.64■□□□□ 0.57
LIMK2-204ENST00000406516 PDE1AP54750 535 aa18.64■□□□□ 0.57
LIMK2-204ENST00000406516 FKBP5Q13451 457 aaPredicted RBP18.64■□□□□ 0.57
LIMK2-204ENST00000406516 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
LIMK2-204ENST00000406516 RNMTO43148 476 aaKnown RBP18.64■□□□□ 0.57
LIMK2-204ENST00000406516 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
LIMK2-204ENST00000406516 ERC2O15083 957 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms