RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
PRAME-205ENST00000405655 SRCIN1Q9C0H9 1055 aa17.55■□□□□ 0.4
PRAME-205ENST00000405655 HOXB7P09629 217 aa17.55■□□□□ 0.4
PRAME-205ENST00000405655 IL2RBP14784 551 aa17.55■□□□□ 0.4
PRAME-205ENST00000405655 CARD10Q9BWT7 1032 aa17.55■□□□□ 0.4
PRAME-205ENST00000405655 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
PRAME-205ENST00000405655 UBTFL1P0CB47 393 aaPredicted RBP17.54■□□□□ 0.4
PRAME-205ENST00000405655 LTBP4Q8N2S1 1624 aa17.54■□□□□ 0.4
PRAME-205ENST00000405655 SOS1Q07889 1333 aaPredicted RBP17.54■□□□□ 0.4
PRAME-205ENST00000405655 N4BP2Q86UW6 1770 aaPredicted RBP17.53■□□□□ 0.4
PRAME-205ENST00000405655 PARP4Q9UKK3 1724 aaKnown RBP17.52■□□□□ 0.4
PRAME-205ENST00000405655 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
PRAME-205ENST00000405655 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
PRAME-205ENST00000405655 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.4
PRAME-205ENST00000405655 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.4
PRAME-205ENST00000405655 XAGE3Q8WTP9 111 aa17.52■□□□□ 0.4
PRAME-205ENST00000405655 ATP8B2P98198 1209 aa17.52■□□□□ 0.39
PRAME-205ENST00000405655 NBR1Q14596 966 aa17.52■□□□□ 0.39
PRAME-205ENST00000405655 COPS6Q7L5N1 327 aa17.52■□□□□ 0.39
PRAME-205ENST00000405655 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.39
PRAME-205ENST00000405655 GNAI3P08754 354 aa17.51■□□□□ 0.39
PRAME-205ENST00000405655 DDX21Q9NR30 783 aaKnown RBP eCLIP17.51■□□□□ 0.39
PRAME-205ENST00000405655 IL1RAPL2Q9NP60 686 aa17.5■□□□□ 0.39
PRAME-205ENST00000405655 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
PRAME-205ENST00000405655 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
PRAME-205ENST00000405655 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
PRAME-205ENST00000405655 COL16A1Q07092 1604 aaPredicted RBP17.5■□□□□ 0.39
PRAME-205ENST00000405655 TOGARAM1Q9Y4F4 1720 aa17.5■□□□□ 0.39
PRAME-205ENST00000405655 GLI3P10071 1580 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 MRC1P22897 1456 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 BMP2KLQ5H9B9 411 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 LRP10Q7Z4F1 713 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 TBC1D32Q96NH3 1257 aa17.49■□□□□ 0.39
PRAME-205ENST00000405655 A1BGP04217 495 aa17.48■□□□□ 0.39
PRAME-205ENST00000405655 IGKV5-2P06315 115 aa17.48■□□□□ 0.39
PRAME-205ENST00000405655 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
PRAME-205ENST00000405655 FMNL2Q96PY5 1086 aa17.48■□□□□ 0.39
PRAME-205ENST00000405655 HYPKQ9NX55 129 aa17.48■□□□□ 0.39
PRAME-205ENST00000405655 PXDNLA1KZ92 1463 aa17.48■□□□□ 0.39
PRAME-205ENST00000405655 NBPF26B4DH59 902 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 HMMRO75330 724 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 NBPF14Q5TI25 921 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 NBPF10Q6P3W6 841 aaKnown RBP17.47■□□□□ 0.39
PRAME-205ENST00000405655 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 NBPF15Q8N660 670 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 SRGAP3O43295 1099 aa17.47■□□□□ 0.39
PRAME-205ENST00000405655 PA2G4Q9UQ80 394 aaKnown RBP17.47■□□□□ 0.39
PRAME-205ENST00000405655 ATP5J2-PTCD1G3V325 749 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 TTC22Q5TAA0 569 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 KAZALD1Q96I82 304 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 MYD88Q99836 296 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
PRAME-205ENST00000405655 ASAP1Q9ULH1 1129 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 HSP90AB1P08238 724 aaKnown RBP17.46■□□□□ 0.39
PRAME-205ENST00000405655 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 C22orf23Q9BZE7 217 aa17.46■□□□□ 0.39
PRAME-205ENST00000405655 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.46■□□□□ 0.39
PRAME-205ENST00000405655 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
PRAME-205ENST00000405655 SPRYD3Q8NCJ5 442 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 SUCLG2Q96I99 432 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 PHLPP1O60346 1717 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 SDSP20132 328 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 RTL5Q5HYW3 569 aaPredicted RBP17.45■□□□□ 0.38
PRAME-205ENST00000405655 TTLL7Q6ZT98 887 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
PRAME-205ENST00000405655 SSH3Q8TE77 659 aa17.44■□□□□ 0.38
PRAME-205ENST00000405655 DDRGK1Q96HY6 314 aa17.44■□□□□ 0.38
PRAME-205ENST00000405655 EPHA10Q5JZY3 1008 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 PIGBQ92521 554 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 ZNF330Q9Y3S2 320 aaPredicted RBP17.43■□□□□ 0.38
PRAME-205ENST00000405655 A0A0G2JS52 829 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 MAP4K4O95819 1239 aaPredicted RBP17.43■□□□□ 0.38
PRAME-205ENST00000405655 PDE1AP54750 535 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 NKX1-1Q15270 411 aaPredicted RBP17.43■□□□□ 0.38
PRAME-205ENST00000405655 LRRCC1Q9C099 1032 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 AHDC1Q5TGY3 1603 aaPredicted RBP17.43■□□□□ 0.38
PRAME-205ENST00000405655 PLEKHG2Q9H7P9 1386 aa17.43■□□□□ 0.38
PRAME-205ENST00000405655 IBTKQ9P2D0 1353 aaPredicted RBP17.43■□□□□ 0.38
PRAME-205ENST00000405655 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
PRAME-205ENST00000405655 POLA2Q14181 598 aa17.42■□□□□ 0.38
PRAME-205ENST00000405655 SYTL4Q96C24 671 aaPredicted RBP17.42■□□□□ 0.38
PRAME-205ENST00000405655 ITGB4P16144 1822 aa17.42■□□□□ 0.38
PRAME-205ENST00000405655 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
PRAME-205ENST00000405655 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
PRAME-205ENST00000405655 BICC1Q9H694 974 aaKnown RBP17.42■□□□□ 0.38
PRAME-205ENST00000405655 UPF2Q9HAU5 1272 aaKnown RBP17.42■□□□□ 0.38
PRAME-205ENST00000405655 COL14A1Q05707 1796 aaKnown RBP17.41■□□□□ 0.38
PRAME-205ENST00000405655 NEURL1BA8MQ27 555 aa17.41■□□□□ 0.38
PRAME-205ENST00000405655 UBR2Q8IWV8 1755 aa17.41■□□□□ 0.38
PRAME-205ENST00000405655 AFDNP55196 1824 aaKnown RBP17.41■□□□□ 0.38
PRAME-205ENST00000405655 UNC5CLQ8IV45 518 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 LINS1Q8NG48 757 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 GRM8O00222 908 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 RBM42Q9BTD8 480 aaKnown RBP17.4■□□□□ 0.38
PRAME-205ENST00000405655 ZBTB3Q9H5J0 574 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 SALL3Q9BXA9 1300 aa17.4■□□□□ 0.38
PRAME-205ENST00000405655 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
PRAME-205ENST00000405655 SIL1Q9H173 461 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms