RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 F13A1P00488 732 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 CCDC186Q7Z3E2 898 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 INTS4Q96HW7 963 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 SLC52A1Q9NWF4 448 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 PTPRCP08575 1304 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 USP32Q8NFA0 1604 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 CCT4P50991 539 aaKnown RBP11.47□□□□□ -0.57
SMC1B-202ENST00000404354 UBE2HP62256 183 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 DMTNQ08495 405 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 PRIMPOLQ96LW4 560 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 KIDINS220Q9ULH0 1771 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 PTPRMP28827 1452 aa11.47□□□□□ -0.57
SMC1B-202ENST00000404354 ZFYVE9O95405 1425 aa11.46□□□□□ -0.57
SMC1B-202ENST00000404354 RPAP1Q9BWH6 1393 aaPredicted RBP11.46□□□□□ -0.57
SMC1B-202ENST00000404354 SRGAP3O43295 1099 aa11.46□□□□□ -0.57
SMC1B-202ENST00000404354 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
SMC1B-202ENST00000404354 OSBPL3Q9H4L5 887 aa11.46□□□□□ -0.57
SMC1B-202ENST00000404354 LIG1P18858 919 aa11.46□□□□□ -0.58
SMC1B-202ENST00000404354 FAM184AQ8NB25 1140 aa11.46□□□□□ -0.58
SMC1B-202ENST00000404354 HSPA4P34932 840 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 PTH1RQ03431 593 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 KIAA1524Q8TCG1 905 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 TRIM5Q9C035 493 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 LIMCH1Q9UPQ0 1083 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 CCDC61Q9Y6R9 512 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 ZNF771Q7L3S4 317 aaPredicted RBP11.45□□□□□ -0.58
SMC1B-202ENST00000404354 SYTL4Q96C24 671 aaPredicted RBP11.45□□□□□ -0.58
SMC1B-202ENST00000404354 USP44Q9H0E7 712 aa11.45□□□□□ -0.58
SMC1B-202ENST00000404354 NEXMIFQ5QGS0 1516 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
SMC1B-202ENST00000404354 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
SMC1B-202ENST00000404354 USHBP1Q8N6Y0 703 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 DDX11Q96FC9 970 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 MAP3K19Q56UN5 1328 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 ZBTB22O15209 634 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 CCDC9Q9Y3X0 531 aaKnown RBP11.44□□□□□ -0.58
SMC1B-202ENST00000404354 ARHGAP31Q2M1Z3 1444 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 ABCA9Q8IUA7 1624 aa11.44□□□□□ -0.58
SMC1B-202ENST00000404354 GNAI3P08754 354 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 ARID5BQ14865 1188 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 UVSSAQ2YD98 709 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 LARP1BQ659C4 914 aaKnown RBP11.43□□□□□ -0.58
SMC1B-202ENST00000404354 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 ANAPC15P60006 121 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 TTC6Q86TZ1 520 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 RHPN1Q8TCX5 695 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 PDRG1Q9NUG6 133 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 DACT1Q9NYF0 836 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 ANO6Q4KMQ2 910 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 C14orf37Q86TY3 774 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 ERCC4Q92889 916 aaPredicted RBP11.43□□□□□ -0.58
SMC1B-202ENST00000404354 PA2G4Q9UQ80 394 aaKnown RBP11.43□□□□□ -0.58
SMC1B-202ENST00000404354 MTMR6Q9Y217 621 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.43□□□□□ -0.58
SMC1B-202ENST00000404354 SOS1Q07889 1333 aaPredicted RBP11.43□□□□□ -0.58
SMC1B-202ENST00000404354 SALL3Q9BXA9 1300 aa11.43□□□□□ -0.58
SMC1B-202ENST00000404354 SGSM2O43147 1006 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 AMPHP49418 695 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 CDC37L1Q7L3B6 337 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 TRMT1Q9NXH9 659 aaKnown RBP11.42□□□□□ -0.58
SMC1B-202ENST00000404354 CGNQ9P2M7 1197 aaKnown RBP11.42□□□□□ -0.58
SMC1B-202ENST00000404354 CCDC192P0DO97 292 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 ME3Q16798 604 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 ZBTB9Q96C00 473 aa11.42□□□□□ -0.58
SMC1B-202ENST00000404354 TNNT1P13805 278 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 DNAJC25Q9H1X3 360 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 TAF7Q15545 349 aaPredicted RBP11.41□□□□□ -0.58
SMC1B-202ENST00000404354 TPD52L1Q16890 204 aaPredicted RBP11.41□□□□□ -0.58
SMC1B-202ENST00000404354 LSG1Q9H089 658 aaKnown RBP11.41□□□□□ -0.58
SMC1B-202ENST00000404354 TNMDQ9H2S6 317 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 TAF6LQ9Y6J9 622 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 TYRO3Q06418 890 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 HDGFL1Q5TGJ6 251 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 BICD2Q8TD16 824 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 NUP62CLQ9H1M0 184 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 SPTLC3Q9NUV7 552 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 PRR36Q9H6K5 1346 aa11.41□□□□□ -0.58
SMC1B-202ENST00000404354 CPS1P31327 1500 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 CCDC30Q5VVM6 783 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 FILIP1Q7Z7B0 1213 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 TTC14Q96N46 770 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 HYPKQ9NX55 129 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 RAD50Q92878 1312 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 SIGLEC1Q9BZZ2 1709 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 KIF24Q5T7B8 1368 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 MAP3K11Q16584 847 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 CNTROBQ8N137 903 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 PI4K2BQ8TCG2 481 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 FAM227BQ96M60 508 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 ATP6V1DQ9Y5K8 247 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 ACEP12821 1306 aa11.4□□□□□ -0.58
SMC1B-202ENST00000404354 GOLGA6L6A8MZA4 724 aa11.4□□□□□ -0.59
SMC1B-202ENST00000404354 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.59
SMC1B-202ENST00000404354 SIL1Q9H173 461 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms