RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.48□□□□□ -0.09
RBM39-206ENST00000403542 LARGE1O95461 756 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 MBD3O95983 291 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 AK2P54819 239 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 DNTTIP2Q5QJE6 756 aaKnown RBP14.48□□□□□ -0.09
RBM39-206ENST00000403542 ZKSCAN5Q9Y2L8 839 aa14.48□□□□□ -0.09
RBM39-206ENST00000403542 IGSF1Q8N6C5 1336 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 CASTP20810 708 aaKnown RBP14.47□□□□□ -0.09
RBM39-206ENST00000403542 TSC1Q92574 1164 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 TCEANC2Q96MN5 208 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 SETD1BQ9UPS6 1966 aaKnown RBP14.47□□□□□ -0.09
RBM39-206ENST00000403542 MON2Q7Z3U7 1717 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 SPATA31D1Q6ZQQ2 1576 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 ARHGEF10O15013 1369 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 UQCRHLA0A096LP55 91 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 UQCRHP07919 91 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 TPM2P07951 284 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 HCLS1P14317 486 aaPredicted RBP14.47□□□□□ -0.09
RBM39-206ENST00000403542 MCM2P49736 904 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 CCDC83Q8IWF9 413 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 PPP6R1Q9UPN7 881 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 SNX14Q9Y5W7 946 aa14.47□□□□□ -0.09
RBM39-206ENST00000403542 REREQ9P2R6 1566 aa14.46□□□□□ -0.09
RBM39-206ENST00000403542 SBNO1A3KN83 1393 aa14.46□□□□□ -0.09
RBM39-206ENST00000403542 COL9A3Q14050 684 aaPredicted RBP14.46□□□□□ -0.09
RBM39-206ENST00000403542 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.09
RBM39-206ENST00000403542 ITSN1Q15811 1721 aa14.46□□□□□ -0.09
RBM39-206ENST00000403542 ADAMTS13Q76LX8 1427 aa14.46□□□□□ -0.1
RBM39-206ENST00000403542 FAM177BA6PVY3 158 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 HSPA4P34932 840 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 LMOD2Q6P5Q4 547 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 NECAB1Q8N987 351 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 PI4K2BQ8TCG2 481 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 LRRC59Q96AG4 307 aaKnown RBP14.45□□□□□ -0.1
RBM39-206ENST00000403542 ZMYND15Q9H091 742 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.45□□□□□ -0.1
RBM39-206ENST00000403542 ADCK5Q3MIX3 580 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 PRPF40BQ6NWY9 871 aaKnown RBP14.45□□□□□ -0.1
RBM39-206ENST00000403542 RUFY3Q7L099 469 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 TTC12Q9H892 705 aaPredicted RBP14.45□□□□□ -0.1
RBM39-206ENST00000403542 EID1Q9Y6B2 187 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 PTPRUQ92729 1446 aa14.45□□□□□ -0.1
RBM39-206ENST00000403542 PRAMEF22A3QJZ6 481 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 VPS37CA5D8V6 355 aaPredicted RBP14.44□□□□□ -0.1
RBM39-206ENST00000403542 PTH1RQ03431 593 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 GIMAP6Q6P9H5 292 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 FERMT3Q86UX7 667 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 STAP2Q9UGK3 403 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
RBM39-206ENST00000403542 USP31Q70CQ4 1352 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 WDR33Q9C0J8 1336 aaKnown RBP14.44□□□□□ -0.1
RBM39-206ENST00000403542 SYT1P21579 422 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 AIMP1Q12904 312 aaKnown RBP14.44□□□□□ -0.1
RBM39-206ENST00000403542 FAM173BQ6P4H8 233 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 SSH3Q8TE77 659 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 SGSM2O43147 1006 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 ANAPC15P60006 121 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 CWF19L2Q2TBE0 894 aaKnown RBP14.44□□□□□ -0.1
RBM39-206ENST00000403542 JAKMIP1Q96N16 626 aaKnown RBP14.44□□□□□ -0.1
RBM39-206ENST00000403542 SIL1Q9H173 461 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 DIAPH3Q9NSV4 1193 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 SMC3Q9UQE7 1217 aa14.44□□□□□ -0.1
RBM39-206ENST00000403542 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.43□□□□□ -0.1
RBM39-206ENST00000403542 INTS4Q96HW7 963 aaKnown RBP14.43□□□□□ -0.1
RBM39-206ENST00000403542 CCDC39Q9UFE4 941 aa14.43□□□□□ -0.1
RBM39-206ENST00000403542 KCNJ4P48050 445 aa14.43□□□□□ -0.1
RBM39-206ENST00000403542 DNM1Q05193 864 aaKnown RBP14.43□□□□□ -0.1
RBM39-206ENST00000403542 MAP3K5Q99683 1374 aa14.43□□□□□ -0.1
RBM39-206ENST00000403542 TCHHQ07283 1943 aa14.43□□□□□ -0.1
RBM39-206ENST00000403542 TECPR2O15040 1411 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 PROSER3Q2NL68 480 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 NBPF6Q5VWK0 638 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 CNTROBQ8N137 903 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 SYAP1Q96A49 352 aaPredicted RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 NBPF4Q96M43 638 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 KDRP35968 1356 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 RPAP1Q9BWH6 1393 aaPredicted RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 STX6O43752 255 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 KCNA6P17658 529 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 DNAAF4Q8WXU2 420 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 KIF1BPQ96EK5 621 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 LSG1Q9H089 658 aaKnown RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 C9orf78Q9NZ63 289 aaPredicted RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 CCDC9Q9Y3X0 531 aaKnown RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.42□□□□□ -0.1
RBM39-206ENST00000403542 RAD50Q92878 1312 aa14.42□□□□□ -0.1
RBM39-206ENST00000403542 AKAP12Q02952 1782 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 KLHDC4Q8TBB5 520 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 NRKQ7Z2Y5 1582 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 ZNF500O60304 480 aaPredicted RBP14.41□□□□□ -0.1
RBM39-206ENST00000403542 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
RBM39-206ENST00000403542 GJB2P29033 226 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 TEFQ10587 303 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 CCDC8Q9H0W5 538 aaPredicted RBP14.41□□□□□ -0.1
RBM39-206ENST00000403542 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
RBM39-206ENST00000403542 ADCY5O95622 1261 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 SPC24Q8NBT2 197 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 CAMK4Q16566 473 aa14.4□□□□□ -0.1
RBM39-206ENST00000403542 LIMCH1Q9UPQ0 1083 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms