RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 ORAI2Q96SN7 254 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 CHMP3Q9Y3E7 222 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 OVOS2A0A0J9YW53 1432 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 OVOS2Q6IE36 1432 aa9.31□□□□□ -0.92
HDAC9-201ENST00000401921 G3BP1Q13283 466 aaKnown RBP eCLIP9.3□□□□□ -0.92
HDAC9-201ENST00000401921 HSP90AB4PQ58FF6 505 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 RAPGEF4Q8WZA2 1011 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 PALD1Q9ULE6 856 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 CRB1P82279 1406 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 PTPRUQ92729 1446 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 KCNH5Q8NCM2 988 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 PA2G4Q9UQ80 394 aaKnown RBP9.3□□□□□ -0.92
HDAC9-201ENST00000401921 MAP3K2Q9Y2U5 619 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 ZNF330Q9Y3S2 320 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-201ENST00000401921 ATP10DQ9P241 1426 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 FSD2A1L4K1 749 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 ESPNB1AK53 854 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 MCM2P49736 904 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 KLHL40Q2TBA0 621 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 CWF19L2Q2TBE0 894 aaKnown RBP9.3□□□□□ -0.92
HDAC9-201ENST00000401921 IP6K1Q92551 441 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 AK9Q5TCS8 1911 aa9.3□□□□□ -0.92
HDAC9-201ENST00000401921 SLC39A6Q13433 755 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 JARID2Q92833 1246 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 SYCE3A1L190 88 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 DDX58O95786 925 aaKnown RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 NEXNQ0ZGT2 675 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 AACSQ86V21 672 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 CCDC8Q9H0W5 538 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 DBF4Q9UBU7 674 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 DLG5Q8TDM6 1919 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 TECPR2O15040 1411 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 RAB11FIP3O75154 756 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 GCP02774 474 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 PIP4K2AP48426 406 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 ANKRD24Q8TF21 1146 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 RUFY2Q8WXA3 655 aa9.29□□□□□ -0.92
HDAC9-201ENST00000401921 ISY1Q9ULR0 285 aaKnown RBP9.29□□□□□ -0.92
HDAC9-201ENST00000401921 USP31Q70CQ4 1352 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 SOS1Q07889 1333 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-201ENST00000401921 EIF4A1P60842 406 aaKnown RBP9.28□□□□□ -0.92
HDAC9-201ENST00000401921 NAP1L2Q9ULW6 460 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-201ENST00000401921 SMC3Q9UQE7 1217 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 HDAC5Q9UQL6 1122 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 ITSN1Q15811 1721 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 VPS37CA5D8V6 355 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-201ENST00000401921 MPNDQ8N594 471 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 TAOK2Q9UL54 1235 aa9.28□□□□□ -0.92
HDAC9-201ENST00000401921 CPA1P15085 419 aa9.27□□□□□ -0.92
HDAC9-201ENST00000401921 ZSCAN23Q3MJ62 389 aa9.27□□□□□ -0.92
HDAC9-201ENST00000401921 TTC5Q8N0Z6 440 aa9.27□□□□□ -0.92
HDAC9-201ENST00000401921 PRAMEF22A3QJZ6 481 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 CASTP20810 708 aaKnown RBP9.27□□□□□ -0.93
HDAC9-201ENST00000401921 AKAP4Q5JQC9 854 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 SYAP1Q96A49 352 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-201ENST00000401921 A0A0G2JS52 829 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 ZKSCAN1P17029 563 aaPredicted RBP9.27□□□□□ -0.93
HDAC9-201ENST00000401921 DDIT3P35638 169 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 PRPF40BQ6NWY9 871 aaKnown RBP9.27□□□□□ -0.93
HDAC9-201ENST00000401921 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
HDAC9-201ENST00000401921 BOLA2Q9H3K6 86 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 OSBPL3Q9H4L5 887 aa9.27□□□□□ -0.93
HDAC9-201ENST00000401921 RGS12O14924 1447 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 FIBPO43427 364 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 GLRX3O76003 335 aaKnown RBP9.26□□□□□ -0.93
HDAC9-201ENST00000401921 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 KRT28Q7Z3Y7 464 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 FSD1Q9BTV5 496 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 LMBRD1Q9NUN5 540 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 IBTKQ9P2D0 1353 aaPredicted RBP9.26□□□□□ -0.93
HDAC9-201ENST00000401921 PRIM1P49642 420 aaKnown RBP9.26□□□□□ -0.93
HDAC9-201ENST00000401921 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 DNTTIP2Q5QJE6 756 aaKnown RBP9.26□□□□□ -0.93
HDAC9-201ENST00000401921 SSH3Q8TE77 659 aa9.26□□□□□ -0.93
HDAC9-201ENST00000401921 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
HDAC9-201ENST00000401921 PROSER3Q2NL68 480 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 PDCL3Q9H2J4 239 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 CEP170BQ9Y4F5 1589 aaPredicted RBP9.25□□□□□ -0.93
HDAC9-201ENST00000401921 CLCN1P35523 988 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 CCDC83Q8IWF9 413 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 CABLES1Q8TDN4 633 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 ATF3P18847 181 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 CHRNA2Q15822 529 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 KLHDC4Q8TBB5 520 aa9.25□□□□□ -0.93
HDAC9-201ENST00000401921 GOLGA6L4A6NEF3 574 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 MBD3O95983 291 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 TATP17735 454 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 BEND3Q5T5X7 828 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 DDX17Q92841 729 aaKnown RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 TCEANC2Q96MN5 208 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 MYD88Q99836 296 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 ECHDC1Q9NTX5 307 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 WDR33Q9C0J8 1336 aaKnown RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 KDRP35968 1356 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 NRXN3Q9Y4C0 1643 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 KSR2Q6VAB6 950 aa9.24□□□□□ -0.93
HDAC9-201ENST00000401921 BBXQ8WY36 941 aaPredicted RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 DNAJC2Q99543 621 aaKnown RBP9.24□□□□□ -0.93
HDAC9-201ENST00000401921 ANAPC15P60006 121 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms