RNA–Protein interactions for RNA: ENST00000401642.7

SCFD2-202, Transcript of sec1 family domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD2, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-202ENST00000401642 NLRP2Q9NX02 1062 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 MON2Q7Z3U7 1717 aa13.5□□□□□ -0.25
SCFD2-202ENST00000401642 NSFL1CQ9UNZ2 370 aaKnown RBP13.49□□□□□ -0.25
SCFD2-202ENST00000401642 MAP3K2Q9Y2U5 619 aa13.49□□□□□ -0.25
SCFD2-202ENST00000401642 RGPD8O14715 1765 aaPredicted RBP13.49□□□□□ -0.25
SCFD2-202ENST00000401642 CSB-PGBD3P0DP91 1061 aa13.49□□□□□ -0.25
SCFD2-202ENST00000401642 NASPP49321 788 aaPredicted RBP13.49□□□□□ -0.25
SCFD2-202ENST00000401642 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
SCFD2-202ENST00000401642 NUCB2P80303 420 aa13.49□□□□□ -0.25
SCFD2-202ENST00000401642 NCOA3Q9Y6Q9 1424 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 UBR1Q8IWV7 1749 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 GCP02774 474 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 IP6K1Q92551 441 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 ZDHHC9Q9Y397 364 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 KIF24Q5T7B8 1368 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 SKOR2Q2VWA4 1001 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-202ENST00000401642 ANP32BQ92688 251 aaKnown RBP13.48□□□□□ -0.25
SCFD2-202ENST00000401642 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-202ENST00000401642 AXIN2Q9Y2T1 843 aa13.48□□□□□ -0.25
SCFD2-202ENST00000401642 SSH2Q76I76 1423 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 KCNJ4P48050 445 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 ANKRD24Q8TF21 1146 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 KDRP35968 1356 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 SYCE3A1L190 88 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 CHRNA2Q15822 529 aa13.47□□□□□ -0.25
SCFD2-202ENST00000401642 KIAA1211Q6ZU35 1233 aa13.46□□□□□ -0.25
SCFD2-202ENST00000401642 PLEKHO1Q53GL0 409 aaPredicted RBP13.46□□□□□ -0.25
SCFD2-202ENST00000401642 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
SCFD2-202ENST00000401642 REREQ9P2R6 1566 aa13.46□□□□□ -0.25
SCFD2-202ENST00000401642 IBTKQ9P2D0 1353 aaPredicted RBP13.46□□□□□ -0.26
SCFD2-202ENST00000401642 PDE4CQ08493 712 aa13.46□□□□□ -0.26
SCFD2-202ENST00000401642 HSP90AA2PQ14568 343 aaPredicted RBP13.46□□□□□ -0.26
SCFD2-202ENST00000401642 LMBRD1Q9NUN5 540 aa13.46□□□□□ -0.26
SCFD2-202ENST00000401642 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.26
SCFD2-202ENST00000401642 DIP2AQ14689 1571 aa13.46□□□□□ -0.26
SCFD2-202ENST00000401642 ERBB4Q15303 1308 aa13.46□□□□□ -0.26
SCFD2-202ENST00000401642 ZSCAN23Q3MJ62 389 aa13.45□□□□□ -0.26
SCFD2-202ENST00000401642 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
SCFD2-202ENST00000401642 AKAP12Q02952 1782 aa13.45□□□□□ -0.26
SCFD2-202ENST00000401642 PRIM1P49642 420 aaKnown RBP13.45□□□□□ -0.26
SCFD2-202ENST00000401642 GPT2Q8TD30 523 aa13.45□□□□□ -0.26
SCFD2-202ENST00000401642 DIAPH3Q9NSV4 1193 aa13.45□□□□□ -0.26
SCFD2-202ENST00000401642 IFIT2P09913 472 aaKnown RBP13.44□□□□□ -0.26
SCFD2-202ENST00000401642 AACSQ86V21 672 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
SCFD2-202ENST00000401642 RIC3Q7Z5B4 369 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 ZNF330Q9Y3S2 320 aaPredicted RBP13.44□□□□□ -0.26
SCFD2-202ENST00000401642 PLCB2Q00722 1185 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 KLHL40Q2TBA0 621 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 BEND3Q5T5X7 828 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 RASEFQ8IZ41 740 aa13.44□□□□□ -0.26
SCFD2-202ENST00000401642 ESPNB1AK53 854 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
SCFD2-202ENST00000401642 KIF1BPQ96EK5 621 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 OSBPL3Q9H4L5 887 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 SSH3Q8TE77 659 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 BOLA2Q9H3K6 86 aa13.43□□□□□ -0.26
SCFD2-202ENST00000401642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.43□□□□□ -0.26
SCFD2-202ENST00000401642 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 EDC3Q96F86 508 aaKnown RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 RBSNQ9H1K0 784 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 RNMTO43148 476 aaKnown RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 CASTP20810 708 aaKnown RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 KRT28Q7Z3Y7 464 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 NFATC2IPQ8NCF5 419 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 CNTROBQ8N137 903 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 CWC22Q9HCG8 908 aaKnown RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 TMEM63CQ9P1W3 806 aa13.42□□□□□ -0.26
SCFD2-202ENST00000401642 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
SCFD2-202ENST00000401642 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
SCFD2-202ENST00000401642 PTCD1O75127 700 aaKnown RBP13.41□□□□□ -0.26
SCFD2-202ENST00000401642 GADD45BO75293 160 aaPredicted RBP13.41□□□□□ -0.26
SCFD2-202ENST00000401642 AKAP4Q5JQC9 854 aa13.41□□□□□ -0.26
SCFD2-202ENST00000401642 PTH1RQ03431 593 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 NECAB1Q8N987 351 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 RAPGEF4Q8WZA2 1011 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 TLR7Q9NYK1 1049 aaKnown RBP13.4□□□□□ -0.26
SCFD2-202ENST00000401642 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.4□□□□□ -0.26
SCFD2-202ENST00000401642 FIBPO43427 364 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 PPFIA3O75145 1194 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 CCDC83Q8IWF9 413 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 KCNH5Q8NCM2 988 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 JAKMIP1Q96N16 626 aaKnown RBP13.4□□□□□ -0.26
SCFD2-202ENST00000401642 BICC1Q9H694 974 aaKnown RBP13.4□□□□□ -0.26
SCFD2-202ENST00000401642 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
SCFD2-202ENST00000401642 FGD1P98174 961 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 SUCLG2Q96I99 432 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 FAM227BQ96M60 508 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 MYD88Q99836 296 aa13.4□□□□□ -0.26
SCFD2-202ENST00000401642 NRKQ7Z2Y5 1582 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 CHGBP05060 677 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 AK2P54819 239 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 PIK3C2AO00443 1686 aa13.39□□□□□ -0.27
SCFD2-202ENST00000401642 VPS37CA5D8V6 355 aaPredicted RBP13.39□□□□□ -0.27
SCFD2-202ENST00000401642 G3BP1Q13283 466 aaKnown RBP eCLIP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms