RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
CLIP4-203ENST00000401617 KSR2Q6VAB6 950 aa15.26■□□□□ 0.03
CLIP4-203ENST00000401617 ZNF496Q96IT1 587 aaPredicted RBP15.26■□□□□ 0.03
CLIP4-203ENST00000401617 UPF2Q9HAU5 1272 aaKnown RBP15.26■□□□□ 0.03
CLIP4-203ENST00000401617 LRRFIP2Q9Y608 721 aaKnown RBP15.26■□□□□ 0.03
CLIP4-203ENST00000401617 LAMB4A4D0S4 1761 aa15.26■□□□□ 0.03
CLIP4-203ENST00000401617 PAPPAQ13219 1627 aa15.26■□□□□ 0.03
CLIP4-203ENST00000401617 PNMA6EA0A0J9YXQ4 647 aa15.25■□□□□ 0.03
CLIP4-203ENST00000401617 ERVV-2B6SEH9 535 aa15.25■□□□□ 0.03
CLIP4-203ENST00000401617 ALDH1L1O75891 902 aa15.25■□□□□ 0.03
CLIP4-203ENST00000401617 CABP4P57796 275 aa15.25■□□□□ 0.03
CLIP4-203ENST00000401617 SNRPA1P09661 255 aaKnown RBP15.25■□□□□ 0.03
CLIP4-203ENST00000401617 SSH3Q8TE77 659 aa15.25■□□□□ 0.03
CLIP4-203ENST00000401617 C16orf71Q8IYS4 520 aaPredicted RBP15.24■□□□□ 0.03
CLIP4-203ENST00000401617 FMNL2Q96PY5 1086 aa15.24■□□□□ 0.03
CLIP4-203ENST00000401617 COL16A1Q07092 1604 aaPredicted RBP15.24■□□□□ 0.03
CLIP4-203ENST00000401617 EVA1CP58658 441 aa15.24■□□□□ 0.03
CLIP4-203ENST00000401617 POLA2Q14181 598 aa15.24■□□□□ 0.03
CLIP4-203ENST00000401617 LRP10Q7Z4F1 713 aa15.24■□□□□ 0.03
CLIP4-203ENST00000401617 MAP3K2Q9Y2U5 619 aa15.24■□□□□ 0.03
CLIP4-203ENST00000401617 GSPT1P15170 499 aaKnown RBP15.23■□□□□ 0.03
CLIP4-203ENST00000401617 TTC22Q5TAA0 569 aa15.23■□□□□ 0.03
CLIP4-203ENST00000401617 TTC5Q8N0Z6 440 aa15.23■□□□□ 0.03
CLIP4-203ENST00000401617 STRN4Q9NRL3 753 aa15.23■□□□□ 0.03
CLIP4-203ENST00000401617 NBPF7P0C2Y1 421 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-203ENST00000401617 OSBPL3Q9H4L5 887 aa15.22■□□□□ 0.03
CLIP4-203ENST00000401617 TUBGCP6Q96RT7 1819 aa15.22■□□□□ 0.03
CLIP4-203ENST00000401617 SMARCA5O60264 1052 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-203ENST00000401617 DDX58O95786 925 aaKnown RBP15.22■□□□□ 0.03
CLIP4-203ENST00000401617 OTUD7AQ8TE49 926 aaPredicted RBP15.22■□□□□ 0.03
CLIP4-203ENST00000401617 TOGARAM1Q9Y4F4 1720 aa15.22■□□□□ 0.03
CLIP4-203ENST00000401617 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
CLIP4-203ENST00000401617 USP16Q9Y5T5 823 aa15.21■□□□□ 0.03
CLIP4-203ENST00000401617 DISP2A7MBM2 1401 aa15.21■□□□□ 0.03
CLIP4-203ENST00000401617 KCPQ6ZWJ8 1503 aa15.21■□□□□ 0.03
CLIP4-203ENST00000401617 UTYO14607 1347 aa15.21■□□□□ 0.03
CLIP4-203ENST00000401617 PLCH1Q4KWH8 1693 aa15.21■□□□□ 0.02
CLIP4-203ENST00000401617 MTX1Q13505 466 aa15.21■□□□□ 0.02
CLIP4-203ENST00000401617 LINS1Q8NG48 757 aa15.21■□□□□ 0.02
CLIP4-203ENST00000401617 C22orf23Q9BZE7 217 aa15.21■□□□□ 0.02
CLIP4-203ENST00000401617 EXOC6BQ9Y2D4 811 aa15.21■□□□□ 0.02
CLIP4-203ENST00000401617 BTG4Q9NY30 223 aa15.2■□□□□ 0.02
CLIP4-203ENST00000401617 TNS2Q63HR2 1409 aa15.2■□□□□ 0.02
CLIP4-203ENST00000401617 MFAP1P55081 439 aaKnown RBP15.19■□□□□ 0.02
CLIP4-203ENST00000401617 TBC1D9Q6ZT07 1266 aa15.19■□□□□ 0.02
CLIP4-203ENST00000401617 PPP1R42Q7Z4L9 355 aa15.19■□□□□ 0.02
CLIP4-203ENST00000401617 LRRCC1Q9C099 1032 aa15.19■□□□□ 0.02
CLIP4-203ENST00000401617 ERBB4Q15303 1308 aa15.19■□□□□ 0.02
CLIP4-203ENST00000401617 HDAC5Q9UQL6 1122 aa15.19■□□□□ 0.02
CLIP4-203ENST00000401617 RAB11FIP3O75154 756 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 CDC45O75419 566 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 RBM25P49756 843 aaKnown RBP15.18■□□□□ 0.02
CLIP4-203ENST00000401617 WNK3Q9BYP7 1800 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 PHLPP1O60346 1717 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 APBB1O00213 710 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 PDE1AP54750 535 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 XAGE3Q8WTP9 111 aa15.18■□□□□ 0.02
CLIP4-203ENST00000401617 ARFGEF2Q9Y6D5 1785 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 IGKV5-2P06315 115 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 COPS6Q7L5N1 327 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 DDX54Q8TDD1 881 aaKnown RBP15.17■□□□□ 0.02
CLIP4-203ENST00000401617 ITGB4P16144 1822 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 SLC4A3P48751 1232 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 AIMP1Q12904 312 aaKnown RBP15.17■□□□□ 0.02
CLIP4-203ENST00000401617 CWF19L2Q2TBE0 894 aaKnown RBP15.17■□□□□ 0.02
CLIP4-203ENST00000401617 METTL22Q9BUU2 404 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-203ENST00000401617 C9orf78Q9NZ63 289 aaPredicted RBP15.17■□□□□ 0.02
CLIP4-203ENST00000401617 STAP2Q9UGK3 403 aa15.17■□□□□ 0.02
CLIP4-203ENST00000401617 GRM8O00222 908 aa15.16■□□□□ 0.02
CLIP4-203ENST00000401617 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
CLIP4-203ENST00000401617 MYL6BP14649 208 aa15.16■□□□□ 0.02
CLIP4-203ENST00000401617 SRGAP3O43295 1099 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 SDSP20132 328 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 ANKRD13DQ6ZTN6 518 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 RIC3Q7Z5B4 369 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 DAXXQ9UER7 740 aaPredicted RBP15.15■□□□□ 0.02
CLIP4-203ENST00000401617 LRP6O75581 1613 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 NEURL1BA8MQ27 555 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 BECN1Q14457 450 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 NRAPQ86VF7 1730 aa15.15■□□□□ 0.02
CLIP4-203ENST00000401617 AFDNP55196 1824 aaKnown RBP15.14■□□□□ 0.02
CLIP4-203ENST00000401617 KAZALD1Q96I82 304 aa15.14■□□□□ 0.01
CLIP4-203ENST00000401617 AOX1Q06278 1338 aa15.14■□□□□ 0.01
CLIP4-203ENST00000401617 NBPF26B4DH59 902 aa15.14■□□□□ 0.01
CLIP4-203ENST00000401617 NBPF14Q5TI25 921 aa15.14■□□□□ 0.01
CLIP4-203ENST00000401617 NBPF10Q6P3W6 841 aaKnown RBP15.14■□□□□ 0.01
CLIP4-203ENST00000401617 NBPF15Q8N660 670 aa15.14■□□□□ 0.01
CLIP4-203ENST00000401617 NUP188Q5SRE5 1749 aa15.13■□□□□ 0.01
CLIP4-203ENST00000401617 SURF6O75683 361 aaKnown RBP15.13■□□□□ 0.01
CLIP4-203ENST00000401617 NEXNQ0ZGT2 675 aa15.13■□□□□ 0.01
CLIP4-203ENST00000401617 HSP90AB4PQ58FF6 505 aa15.13■□□□□ 0.01
CLIP4-203ENST00000401617 COL15A1P39059 1388 aa15.13■□□□□ 0.01
CLIP4-203ENST00000401617 MX1P20591 662 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 GCKRQ14397 625 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 RHPN1Q8TCX5 695 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 KIF1BPQ96EK5 621 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 SUCLG2Q96I99 432 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 USP35Q9P2H5 1018 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
CLIP4-203ENST00000401617 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms