RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 BRD1O95696 1058 aa20.54■□□□□ 0.88
PTPRA-205ENST00000399903 SLC4A10Q6U841 1118 aa20.54■□□□□ 0.88
PTPRA-205ENST00000399903 PALD1Q9ULE6 856 aa20.54■□□□□ 0.88
PTPRA-205ENST00000399903 C3P01024 1663 aa20.53■□□□□ 0.88
PTPRA-205ENST00000399903 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
PTPRA-205ENST00000399903 C16orf45Q96MC5 204 aaPredicted RBP20.53■□□□□ 0.88
PTPRA-205ENST00000399903 DCTPP1Q9H773 170 aa20.53■□□□□ 0.88
PTPRA-205ENST00000399903 FKBP5Q13451 457 aaPredicted RBP20.53■□□□□ 0.88
PTPRA-205ENST00000399903 NAA30Q147X3 362 aaPredicted RBP20.53■□□□□ 0.88
PTPRA-205ENST00000399903 ESCO1Q5FWF5 840 aa20.53■□□□□ 0.88
PTPRA-205ENST00000399903 LMOD3Q0VAK6 560 aa20.52■□□□□ 0.88
PTPRA-205ENST00000399903 API5Q9BZZ5 524 aaKnown RBP20.52■□□□□ 0.87
PTPRA-205ENST00000399903 OVOS2A0A0J9YW53 1432 aa20.51■□□□□ 0.87
PTPRA-205ENST00000399903 OVOS2Q6IE36 1432 aa20.51■□□□□ 0.87
PTPRA-205ENST00000399903 ERICH4A6NGS2 130 aa20.51■□□□□ 0.87
PTPRA-205ENST00000399903 MCCP23508 829 aa20.51■□□□□ 0.87
PTPRA-205ENST00000399903 RTF1Q92541 710 aaKnown RBP20.5■□□□□ 0.87
PTPRA-205ENST00000399903 TRERF1Q96PN7 1200 aa20.5■□□□□ 0.87
PTPRA-205ENST00000399903 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.5■□□□□ 0.87
PTPRA-205ENST00000399903 F6X3S4 739 aa20.5■□□□□ 0.87
PTPRA-205ENST00000399903 CCDC183Q5T5S1 534 aa20.5■□□□□ 0.87
PTPRA-205ENST00000399903 FAM184AQ8NB25 1140 aa20.5■□□□□ 0.87
PTPRA-205ENST00000399903 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
PTPRA-205ENST00000399903 TSPYL4Q9UJ04 414 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 EXOC6BQ9Y2D4 811 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 ITSN1Q15811 1721 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 SETD1BQ9UPS6 1966 aaKnown RBP20.49■□□□□ 0.87
PTPRA-205ENST00000399903 NPHP1O15259 732 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 KDM4AO75164 1064 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 ANKLE2Q86XL3 938 aa20.49■□□□□ 0.87
PTPRA-205ENST00000399903 MON2Q7Z3U7 1717 aa20.48■□□□□ 0.87
PTPRA-205ENST00000399903 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.48■□□□□ 0.873e-8■■■■■ 27.9
PTPRA-205ENST00000399903 V9GYY5 206 aaPredicted RBP20.48■□□□□ 0.87
PTPRA-205ENST00000399903 KCNJ4P48050 445 aa20.48■□□□□ 0.87
PTPRA-205ENST00000399903 G2E3Q7L622 706 aa20.48■□□□□ 0.87
PTPRA-205ENST00000399903 MEIS3Q99687 375 aa20.48■□□□□ 0.87
PTPRA-205ENST00000399903 SLC4A2P04920 1241 aa20.47■□□□□ 0.87
PTPRA-205ENST00000399903 PTGS1P23219 599 aa20.47■□□□□ 0.87
PTPRA-205ENST00000399903 SRCIN1Q9C0H9 1055 aa20.47■□□□□ 0.87
PTPRA-205ENST00000399903 NAP1L2Q9ULW6 460 aaPredicted RBP20.47■□□□□ 0.87
PTPRA-205ENST00000399903 GTF2F1P35269 517 aaKnown RBP eCLIP20.47■□□□□ 0.87
PTPRA-205ENST00000399903 ORAI2Q96SN7 254 aa20.47■□□□□ 0.87
PTPRA-205ENST00000399903 FER1L4A9Z1Z3 1794 aa20.46■□□□□ 0.87
PTPRA-205ENST00000399903 PHF8Q9UPP1 1060 aa20.46■□□□□ 0.87
PTPRA-205ENST00000399903 PSME1Q06323 249 aa20.46■□□□□ 0.87
PTPRA-205ENST00000399903 CAMK4Q16566 473 aa20.46■□□□□ 0.87
PTPRA-205ENST00000399903 KCNF1Q9H3M0 494 aa20.46■□□□□ 0.87
PTPRA-205ENST00000399903 KNDC1Q76NI1 1749 aa20.45■□□□□ 0.87
PTPRA-205ENST00000399903 MAP4K4O95819 1239 aaPredicted RBP20.45■□□□□ 0.86
PTPRA-205ENST00000399903 WDR33Q9C0J8 1336 aaKnown RBP20.45■□□□□ 0.86
PTPRA-205ENST00000399903 UVSSAQ2YD98 709 aa20.45■□□□□ 0.86
PTPRA-205ENST00000399903 HOXC9P31274 260 aa20.45■□□□□ 0.86
PTPRA-205ENST00000399903 KIAA1524Q8TCG1 905 aa20.45■□□□□ 0.86
PTPRA-205ENST00000399903 DLG5Q8TDM6 1919 aa20.45■□□□□ 0.86
PTPRA-205ENST00000399903 PEAK1Q9H792 1746 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 CHL1O00533 1208 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 MX1P20591 662 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 LRMPQ12912 555 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 CEP85Q6P2H3 762 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 ABCC4O15439 1325 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 AKAP12Q02952 1782 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 AP5Z1O43299 807 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 ANKRD44Q8N8A2 993 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 DIP2AQ14689 1571 aa20.44■□□□□ 0.86
PTPRA-205ENST00000399903 RIMS1Q86UR5 1692 aaKnown RBP20.44■□□□□ 0.86
PTPRA-205ENST00000399903 GOLGA6L6A8MZA4 724 aa20.43■□□□□ 0.86
PTPRA-205ENST00000399903 LRRC59Q96AG4 307 aaKnown RBP20.43■□□□□ 0.86
PTPRA-205ENST00000399903 ARHGAP23Q9P227 1491 aa20.43■□□□□ 0.86
PTPRA-205ENST00000399903 FLT4P35916 1363 aa20.43■□□□□ 0.86
PTPRA-205ENST00000399903 TTC21AQ8NDW8 1320 aa20.43■□□□□ 0.86
PTPRA-205ENST00000399903 SPTLC3Q9NUV7 552 aa20.42■□□□□ 0.86
PTPRA-205ENST00000399903 TMEM51Q9NW97 253 aa20.42■□□□□ 0.86
PTPRA-205ENST00000399903 SSH2Q76I76 1423 aa20.42■□□□□ 0.86
PTPRA-205ENST00000399903 PDE1AP54750 535 aa20.42■□□□□ 0.86
PTPRA-205ENST00000399903 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
PTPRA-205ENST00000399903 VPS37CA5D8V6 355 aaPredicted RBP20.42■□□□□ 0.86
PTPRA-205ENST00000399903 MCM2P49736 904 aa20.41■□□□□ 0.86
PTPRA-205ENST00000399903 CCDC186Q7Z3E2 898 aa20.41■□□□□ 0.86
PTPRA-205ENST00000399903 DDX54Q8TDD1 881 aaKnown RBP20.41■□□□□ 0.86
PTPRA-205ENST00000399903 DDX17Q92841 729 aaKnown RBP20.41■□□□□ 0.86
PTPRA-205ENST00000399903 USP31Q70CQ4 1352 aa20.41■□□□□ 0.86
PTPRA-205ENST00000399903 NCBP1Q09161 790 aaKnown RBP20.41■□□□□ 0.86
PTPRA-205ENST00000399903 SLIT1O75093 1534 aa20.41■□□□□ 0.86
PTPRA-205ENST00000399903 TNNT1P13805 278 aa20.4■□□□□ 0.86
PTPRA-205ENST00000399903 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
PTPRA-205ENST00000399903 ESYT1Q9BSJ8 1104 aa20.4■□□□□ 0.86
PTPRA-205ENST00000399903 SBNO1A3KN83 1393 aa20.4■□□□□ 0.86
PTPRA-205ENST00000399903 TPD52L1Q16890 204 aaPredicted RBP20.4■□□□□ 0.86
PTPRA-205ENST00000399903 CKAP2LQ8IYA6 745 aa20.4■□□□□ 0.86
PTPRA-205ENST00000399903 OGFRQ9NZT2 677 aa20.4■□□□□ 0.86
PTPRA-205ENST00000399903 CPA1P15085 419 aa20.39■□□□□ 0.85
PTPRA-205ENST00000399903 LUZP1Q86V48 1076 aa20.38■□□□□ 0.85
PTPRA-205ENST00000399903 RPAP2Q8IXW5 612 aaPredicted RBP20.38■□□□□ 0.85
PTPRA-205ENST00000399903 TRIM5Q9C035 493 aa20.38■□□□□ 0.85
PTPRA-205ENST00000399903 NRBP1Q9UHY1 535 aa20.38■□□□□ 0.85
PTPRA-205ENST00000399903 DNM1Q05193 864 aaKnown RBP20.38■□□□□ 0.85
PTPRA-205ENST00000399903 CCDC112Q8NEF3 446 aa20.38■□□□□ 0.85
PTPRA-205ENST00000399903 SMC3Q9UQE7 1217 aa20.38■□□□□ 0.85
PTPRA-205ENST00000399903 FERMT3Q86UX7 667 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 171.4 ms