RNA–Protein interactions for RNA: ENST00000399273.5

CCDC144A-206, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC144A, Length 8,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-206ENST00000399273 SLC12A7Q9Y666 1083 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 KIF5BP33176 963 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
CCDC144A-206ENST00000399273 RFC4P35249 363 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 LRSAM1Q6UWE0 723 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 CABP5Q9NP86 173 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 ANKRD18BA2A2Z9 1011 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 CFAP100Q494V2 611 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 DDX46Q7L014 1031 aaKnown RBP13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 IQGAP2Q13576 1575 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 TAF3Q5VWG9 929 aa13.46□□□□□ -0.25
CCDC144A-206ENST00000399273 SLC12A5Q9H2X9 1139 aa13.46□□□□□ -0.26
CCDC144A-206ENST00000399273 WDR70Q9NW82 654 aa13.46□□□□□ -0.26
CCDC144A-206ENST00000399273 SNAPC4Q5SXM2 1469 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 VTI1AQ96AJ9 217 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 CALML4Q96GE6 196 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 GOPCQ9HD26 462 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 TRMT112Q9UI30 125 aaKnown RBP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 TTF1Q15361 905 aaPredicted RBP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 TSNARE1Q96NA8 513 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 FCHSD2O94868 740 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 AMPD3Q01432 767 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 PDE4BQ07343 736 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC178Q5BJE1 867 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 MACROD2A1Z1Q3 448 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 EXOC5O00471 708 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 MVPQ14764 893 aaKnown RBP13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC113Q9H0I3 377 aa13.45□□□□□ -0.26
CCDC144A-206ENST00000399273 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 PSMD1Q99460 953 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC194A0A1B0GVG4 234 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC61Q9Y6R9 512 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 ZNF213O14771 459 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 LIG1P18858 919 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 USP8P40818 1118 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 PPP4R3BQ5MIZ7 849 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 FERP16591 822 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 ZNF622Q969S3 477 aaKnown RBP eCLIP13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 CRACR2AQ9BSW2 395 aa13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
CCDC144A-206ENST00000399273 PTPN23Q9H3S7 1636 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 GSTO1P78417 241 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 PPP1R42Q7Z4L9 355 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 CEP63Q96MT8 703 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 MYD88Q99836 296 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 LUZP1Q86V48 1076 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 NFE2L2Q16236 605 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 MAP3K11Q16584 847 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 SREK1Q8WXA9 508 aaKnown RBP13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 C8orf76Q96K31 380 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 NLRP5P59047 1200 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 IFFO1Q0D2I5 559 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 BICD1Q96G01 975 aa13.43□□□□□ -0.26
CCDC144A-206ENST00000399273 PYM1Q9BRP8 204 aaKnown RBP13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 GBP3Q9H0R5 595 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 IGF1RP08069 1367 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 KIF5CO60282 957 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 LDHCP07864 332 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 DNMBPQ6XZF7 1577 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 TAF7Q15545 349 aaPredicted RBP13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC102AQ96A19 550 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 TCP11L1Q9NUJ3 509 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 LMAN1P49257 510 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 USO1O60763 962 aaKnown RBP13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 KLHL10Q6JEL2 608 aa13.42□□□□□ -0.26
CCDC144A-206ENST00000399273 NCBP1Q09161 790 aaKnown RBP13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 B4DLN1 442 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 MRPL12P52815 198 aaKnown RBP13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 CCDC174Q6PII3 467 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 CASQ1P31415 396 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 PLEKHH1Q9ULM0 1364 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 ZGPATQ8N5A5 531 aaKnown RBP13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 SYNCQ9H7C4 482 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 HDAC9Q9UKV0 1011 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 RAPGEF3O95398 923 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 TRAF1Q13077 416 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 CKAP2LQ8IYA6 745 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 OGFOD1Q8N543 542 aa13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 PUF60Q9UHX1 559 aaKnown RBP13.41□□□□□ -0.26
CCDC144A-206ENST00000399273 FAM114A1Q8IWE2 563 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 ZSCAN12O43309 604 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 DUSP27Q5VZP5 1158 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 USP37Q86T82 979 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 TOP2BQ02880 1626 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 IL1RAPL2Q9NP60 686 aa13.4□□□□□ -0.26
CCDC144A-206ENST00000399273 GRM1Q13255 1194 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms