RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 MICALCLQ6ZW33 695 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 CPLX3Q8WVH0 158 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 INCENPQ9NQS7 918 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 SPG7Q9UQ90 795 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 CCDC141Q6ZP82 1450 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 ANKRD62A6NC57 917 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 F6X3S4 739 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 IKQ13123 557 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-205ENST00000399050 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
CTNND1-205ENST00000399050 ABCC5O15440 1437 aa10.05□□□□□ -0.8
CTNND1-205ENST00000399050 BIN1O00499 593 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 ZNF530Q6P9A1 599 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-205ENST00000399050 SEPT11Q9NVA2 429 aaKnown RBP10.04□□□□□ -0.8
CTNND1-205ENST00000399050 CTR9Q6PD62 1173 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 SMARCC1Q92922 1105 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-205ENST00000399050 GNAT3A8MTJ3 354 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 ANO6Q4KMQ2 910 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 HS1BP3Q53T59 392 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-205ENST00000399050 UBAC1Q9BSL1 405 aa10.04□□□□□ -0.8
CTNND1-205ENST00000399050 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
CTNND1-205ENST00000399050 TDO2P48775 406 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 TICAM2Q86XR7 235 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 CNNM3Q8NE01 707 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 TSHZ3Q63HK5 1081 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 GOLGA6L9A6NEM1 432 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 HMGB1P09429 215 aaKnown RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 CCDC186Q7Z3E2 898 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 GNL3LQ9NVN8 582 aaKnown RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 GTF2A1P52655 376 aaPredicted RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 CCT2P78371 535 aaKnown RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 IPO4Q8TEX9 1081 aaKnown RBP10.03□□□□□ -0.8
CTNND1-205ENST00000399050 PIBF1Q8WXW3 757 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 BCCIPQ9P287 314 aaKnown RBP eCLIP10.03□□□□□ -0.81e-6■■■■□ 21.2
CTNND1-205ENST00000399050 PTPRCP08575 1304 aa10.03□□□□□ -0.8
CTNND1-205ENST00000399050 SPINK5Q9NQ38 1064 aaPredicted RBP10.02□□□□□ -0.8
CTNND1-205ENST00000399050 SEC24BO95487 1268 aa10.02□□□□□ -0.8
CTNND1-205ENST00000399050 SDSP20132 328 aa10.02□□□□□ -0.8
CTNND1-205ENST00000399050 SOGA3Q5TF21 947 aa10.02□□□□□ -0.8
CTNND1-205ENST00000399050 ISM2Q6H9L7 571 aa10.02□□□□□ -0.8
CTNND1-205ENST00000399050 RBM42Q9BTD8 480 aaKnown RBP10.02□□□□□ -0.8
CTNND1-205ENST00000399050 SMC5Q8IY18 1101 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 SMAP1Q8IYB5 467 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-205ENST00000399050 ZSWIM4Q9H7M6 989 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 RPGRIP1LQ68CZ1 1315 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 CABP4P57796 275 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 GNG11P61952 73 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 ANKRD18AQ8IVF6 992 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC12Q8WUD4 166 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-205ENST00000399050 DYDC1Q8WWB3 177 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC8Q9H0W5 538 aaPredicted RBP10.02□□□□□ -0.81
CTNND1-205ENST00000399050 SKILP12757 684 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 SLC26A8Q96RN1 970 aa10.02□□□□□ -0.81
CTNND1-205ENST00000399050 CAVIN2O95810 425 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 GBP2P32456 591 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 YEATS4O95619 227 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 TATP17735 454 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-205ENST00000399050 CEP126Q9P2H0 1117 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNND1-205ENST00000399050 FAM135AQ9P2D6 1515 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 SSBP05455 408 aaKnown RBP eCLIP10.01□□□□□ -0.811e-7■■■■■ 26.8
CTNND1-205ENST00000399050 FKBP15Q5T1M5 1219 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 EVI5LQ96CN4 794 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
CTNND1-205ENST00000399050 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.01□□□□□ -0.81
CTNND1-205ENST00000399050 V9GYY5 206 aaPredicted RBP10.01□□□□□ -0.81
CTNND1-205ENST00000399050 ESCO1Q5FWF5 840 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 FAM200AQ8TCP9 573 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 LIG1P18858 919 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 BMP2KQ9NSY1 1161 aaPredicted RBP10□□□□□ -0.81
CTNND1-205ENST00000399050 IFFO1Q0D2I5 559 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 USO1O60763 962 aaKnown RBP10□□□□□ -0.81
CTNND1-205ENST00000399050 IGSF3O75054 1194 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 IDH1O75874 414 aaKnown RBP10□□□□□ -0.81
CTNND1-205ENST00000399050 PAFAH1B1P43034 410 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 GOPCQ9HD26 462 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 DNA2P51530 1060 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 AIDAQ96BJ3 306 aa10□□□□□ -0.81
CTNND1-205ENST00000399050 SCAF11Q99590 1463 aaKnown RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 NECAB1Q8N987 351 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 DNAAF4Q8WXU2 420 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 OGFRQ9NZT2 677 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 GOLGA8BA8MQT2 603 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 IVLP07476 585 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 RBM25P49756 843 aaKnown RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 KRI1Q8N9T8 703 aaKnown RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 ARFGAP3Q9NP61 516 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 DNAI1Q9UI46 699 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 SLU7O95391 586 aaKnown RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 ATP2B2Q01814 1243 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 TAF7Q15545 349 aaPredicted RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 IL16Q14005 1332 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 MNAT1P51948 309 aa9.99□□□□□ -0.81
CTNND1-205ENST00000399050 SSRP1Q08945 709 aaKnown RBP9.99□□□□□ -0.81
CTNND1-205ENST00000399050 DNAJC25Q9H1X3 360 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms